RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 ATP1B3P54709 279 aa9.91□□□□□ -0.82
SCAF11-208ENST00000546534 CFHR3Q02985 330 aa9.91□□□□□ -0.82
SCAF11-208ENST00000546534 SCN1BQ07699 218 aa9.91□□□□□ -0.82
SCAF11-208ENST00000546534 EBI3Q14213 229 aa9.91□□□□□ -0.82
SCAF11-208ENST00000546534 TMEM179BQ7Z7N9 219 aa9.91□□□□□ -0.82
SCAF11-208ENST00000546534 ZNF429Q86V71 674 aa9.91□□□□□ -0.82
SCAF11-208ENST00000546534 Q8N9W7 124 aa9.91□□□□□ -0.82
SCAF11-208ENST00000546534 HAVCR2Q8TDQ0 301 aa9.91□□□□□ -0.82
SCAF11-208ENST00000546534 EAF1Q96JC9 268 aaPredicted RBP9.91□□□□□ -0.82
SCAF11-208ENST00000546534 CNN2Q99439 309 aaKnown RBP9.91□□□□□ -0.82
SCAF11-208ENST00000546534 PPIL3Q9H2H8 161 aaKnown RBP9.91□□□□□ -0.82
SCAF11-208ENST00000546534 ISYNA1Q9NPH2 558 aa9.91□□□□□ -0.82
SCAF11-208ENST00000546534 IGHV3-72A0A0B4J1Y9 119 aa9.9□□□□□ -0.82
SCAF11-208ENST00000546534 IGKV1-12A0A0C4DH73 117 aa9.9□□□□□ -0.82
SCAF11-208ENST00000546534 F8W735 103 aaPredicted RBP9.9□□□□□ -0.82
SCAF11-208ENST00000546534 RRP9O43818 475 aaKnown RBP9.9□□□□□ -0.82
SCAF11-208ENST00000546534 RPP14O95059 124 aaKnown RBP9.9□□□□□ -0.82
SCAF11-208ENST00000546534 SERPINA3P01011 423 aa9.9□□□□□ -0.82
SCAF11-208ENST00000546534 IGKV1D-12P01611 117 aa9.9□□□□□ -0.82
SCAF11-208ENST00000546534 CSN2P05814 226 aa9.9□□□□□ -0.82
SCAF11-208ENST00000546534 OR8U8P0C7N1 319 aa9.9□□□□□ -0.82
SCAF11-208ENST00000546534 ZNF44P15621 663 aa9.9□□□□□ -0.82
SCAF11-208ENST00000546534 PSMB8P28062 276 aa9.9□□□□□ -0.82
SCAF11-208ENST00000546534 VEGFCP49767 419 aa9.9□□□□□ -0.82
SCAF11-208ENST00000546534 MTCP1P56278 107 aa9.9□□□□□ -0.82
SCAF11-208ENST00000546534 BNIP1Q12981 228 aa9.9□□□□□ -0.82
SCAF11-208ENST00000546534 PDZK1IP1Q13113 114 aa9.9□□□□□ -0.82
SCAF11-208ENST00000546534 ATXN7L3Q14CW9 347 aaPredicted RBP9.9□□□□□ -0.82
SCAF11-208ENST00000546534 SPATS1Q496A3 300 aa9.9□□□□□ -0.82
SCAF11-208ENST00000546534 FAM98BQ52LJ0 330 aaKnown RBP9.9□□□□□ -0.82
SCAF11-208ENST00000546534 SLC35F2Q8IXU6 374 aa9.9□□□□□ -0.82
SCAF11-208ENST00000546534 DEFB107AQ8IZN7 70 aa9.9□□□□□ -0.82
SCAF11-208ENST00000546534 Q8N6K4 173 aa9.9□□□□□ -0.82
SCAF11-208ENST00000546534 DNAAF1Q8NEP3 725 aa9.9□□□□□ -0.82
SCAF11-208ENST00000546534 OR1N2Q8NGR9 330 aa9.9□□□□□ -0.82
SCAF11-208ENST00000546534 DCUN1D4Q92564 292 aa9.9□□□□□ -0.82
SCAF11-208ENST00000546534 SLC25A19Q9HC21 320 aa9.9□□□□□ -0.82
SCAF11-208ENST00000546534 TVP23BQ9NYZ1 205 aa9.9□□□□□ -0.82
SCAF11-208ENST00000546534 OR6C3Q9NZP0 311 aa9.9□□□□□ -0.82
SCAF11-208ENST00000546534 IGKV1-9A0A0C4DH69 117 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 ZNF670-ZNF695F2Z2N8 137 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 I3L521 148 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 SLC33A1O00400 549 aaPredicted RBP9.89□□□□□ -0.83
SCAF11-208ENST00000546534 LDLRAD4O15165 306 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 MPZL2O60487 215 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 SAP30O75446 220 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 JTBO76095 146 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 GP9P14770 177 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 VDAC1P21796 283 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 GLP1RP43220 463 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 GNG10P50151 68 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 ZNF616Q08AN1 781 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 GK3PQ14409 553 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 LTC4SQ16873 150 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 FAM53AQ6NSI3 398 aaPredicted RBP9.89□□□□□ -0.83
SCAF11-208ENST00000546534 Q6P435 159 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 BCDIN3DQ7Z5W3 292 aaKnown RBP9.89□□□□□ -0.83
SCAF11-208ENST00000546534 MOB3BQ86TA1 216 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 CATSPERDQ86XM0 798 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 OR13A1Q8NGR1 328 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 RFESDQ8TAC1 157 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 MYOZ3Q8TDC0 251 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 OR5B12Q96R08 314 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 HSPB9Q9BQS6 159 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 COMMD4Q9H0A8 199 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 GNB4Q9HAV0 340 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 CALYQ9NYX4 217 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 IDI2-AS1Q9NZ38 188 aa9.89□□□□□ -0.83
SCAF11-208ENST00000546534 IGHV1-3A0A0C4DH29 117 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 A0A1W2PPE3 182 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 OVOL1O14753 267 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 HSD17B6O14756 317 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 CST1P01037 141 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 PRKACGP22612 351 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 REG1BP48304 166 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 GNB1P62873 340 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 RUNX1Q01196 453 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 ZNF816Q0VGE8 651 aaPredicted RBP9.88□□□□□ -0.83
SCAF11-208ENST00000546534 KIAA0141Q14154 515 aaPredicted RBP9.88□□□□□ -0.83
SCAF11-208ENST00000546534 SRSF7Q16629 238 aaKnown RBP eCLIP9.88□□□□□ -0.83
SCAF11-208ENST00000546534 SSX6Q7RTT6 188 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 IZUMO1Q8IYV9 350 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 HS3ST5Q8IZT8 346 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 YIPF7Q8N8F6 280 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 CHST4Q8NCG5 386 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 OR10X1Q8NGY0 326 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 OR2T10Q8NGZ9 312 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 PP6455Q8WZ26 134 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 RFT1Q96AA3 541 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 ADAT3Q96EY9 351 aaPredicted RBP9.88□□□□□ -0.83
SCAF11-208ENST00000546534 KCTD7Q96MP8 289 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 MNTQ99583 582 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 ELAC2Q9BQ52 826 aaKnown RBP9.88□□□□□ -0.83
SCAF11-208ENST00000546534 ADI1Q9BV57 179 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 OSBPL10Q9BXB5 764 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 TEX12Q9BXU0 123 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 KLK15Q9H2R5 256 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 LINC00574Q9H8X3 128 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 ZNF556Q9HAH1 456 aa9.88□□□□□ -0.83
SCAF11-208ENST00000546534 ADGRL4Q9HBW9 690 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms