RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 AESQ08117 197 aa9.59□□□□□ -0.87
HDAC4-216ENST00000544989 DYNC1I2Q13409 638 aaKnown RBP9.59□□□□□ -0.87
HDAC4-216ENST00000544989 GPR50Q13585 617 aa9.59□□□□□ -0.87
HDAC4-216ENST00000544989 MPV17LQ2QL34 196 aa9.59□□□□□ -0.87
HDAC4-216ENST00000544989 ASPHD2Q6ICH7 369 aa9.59□□□□□ -0.87
HDAC4-216ENST00000544989 TCF23Q7RTU1 214 aa9.59□□□□□ -0.87
HDAC4-216ENST00000544989 RNF144BQ7Z419 303 aa9.59□□□□□ -0.87
HDAC4-216ENST00000544989 OSR2Q8N2R0 312 aa9.59□□□□□ -0.87
HDAC4-216ENST00000544989 TPRX1Q8N7U7 411 aa9.59□□□□□ -0.87
HDAC4-216ENST00000544989 MRPS24Q96EL2 167 aaKnown RBP9.59□□□□□ -0.87
HDAC4-216ENST00000544989 AJUBAQ96IF1 538 aa9.59□□□□□ -0.87
HDAC4-216ENST00000544989 OR14A2Q96R54 314 aa9.59□□□□□ -0.87
HDAC4-216ENST00000544989 NR1H4Q96RI1 486 aaPredicted RBP9.59□□□□□ -0.87
HDAC4-216ENST00000544989 ZNF184Q99676 751 aaPredicted RBP9.59□□□□□ -0.87
HDAC4-216ENST00000544989 RANBP3Q9H6Z4 567 aaPredicted RBP9.59□□□□□ -0.87
HDAC4-216ENST00000544989 ZNF696Q9H7X3 374 aa9.59□□□□□ -0.87
HDAC4-216ENST00000544989 ING4Q9UNL4 249 aa9.59□□□□□ -0.87
HDAC4-216ENST00000544989 ST3GAL6Q9Y274 331 aa9.59□□□□□ -0.87
HDAC4-216ENST00000544989 RNF114Q9Y508 228 aa9.59□□□□□ -0.87
HDAC4-216ENST00000544989 NOTCH1P46531 2555 aa9.58□□□□□ -0.88
HDAC4-216ENST00000544989 CMYA5Q8N3K9 4069 aa9.58□□□□□ -0.88
HDAC4-216ENST00000544989 ERICH4A6NGS2 130 aa9.58□□□□□ -0.88
HDAC4-216ENST00000544989 RANBP1P43487 201 aa9.58□□□□□ -0.88
HDAC4-216ENST00000544989 OR3A4PP47883 348 aa9.58□□□□□ -0.88
HDAC4-216ENST00000544989 GLIPR1P48060 266 aa9.58□□□□□ -0.88
HDAC4-216ENST00000544989 DYNLT3P51808 116 aa9.58□□□□□ -0.88
HDAC4-216ENST00000544989 RBM11P57052 281 aaKnown RBP9.58□□□□□ -0.88
HDAC4-216ENST00000544989 RELBQ01201 579 aa9.58□□□□□ -0.88
HDAC4-216ENST00000544989 SPHARQ15513 63 aa9.58□□□□□ -0.88
HDAC4-216ENST00000544989 JAGN1Q8N5M9 183 aa9.58□□□□□ -0.88
HDAC4-216ENST00000544989 ZFP41Q8N8Y5 198 aa9.58□□□□□ -0.88
HDAC4-216ENST00000544989 OR4C13Q8NGP0 309 aa9.58□□□□□ -0.88
HDAC4-216ENST00000544989 OR13C5Q8NGS8 318 aa9.58□□□□□ -0.88
HDAC4-216ENST00000544989 NDNFQ8TB73 568 aa9.58□□□□□ -0.88
HDAC4-216ENST00000544989 NRG4Q8WWG1 115 aa9.58□□□□□ -0.88
HDAC4-216ENST00000544989 WFDC12Q8WWY7 111 aa9.58□□□□□ -0.88
HDAC4-216ENST00000544989 DERL3Q96Q80 235 aa9.58□□□□□ -0.88
HDAC4-216ENST00000544989 UQCC2Q9BRT2 126 aa9.58□□□□□ -0.88
HDAC4-216ENST00000544989 NPFFR1Q9GZQ6 430 aa9.58□□□□□ -0.88
HDAC4-216ENST00000544989 RAB9BQ9NP90 201 aa9.58□□□□□ -0.88
HDAC4-216ENST00000544989 GHRLQ9UBU3 117 aa9.58□□□□□ -0.88
HDAC4-216ENST00000544989 BLOC1S6Q9UL45 172 aa9.58□□□□□ -0.88
HDAC4-216ENST00000544989 TRAV24A0A0B4J272 114 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 KBTBD11-OT1A0A1B0GTJ5 212 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 PNMA8CA0A1B0GUJ8 204 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 FAM90A10PA6NDY2 464 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 FAM90A18PA6NE21 464 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 FAM90A16PA6NEW6 464 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 FAM90A20PA6NIJ5 464 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 FAM90A7PA6NKC0 464 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 FAM90A22PA8MWA6 464 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 FAM90A12PA8MX19 464 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 FAM90A5PA8MXJ8 464 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 FAM90A23PA8MXZ1 464 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 RGS10O43665 173 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 OR7C1O76099 320 aaPredicted RBP9.57□□□□□ -0.88
HDAC4-216ENST00000544989 CDRT1O95170 752 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 FAM90A15PP0C7V4 464 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 FAM90A13PP0C7W8 464 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 FAM90A14PP0C7W9 464 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 FAM90A24PP0C7X0 464 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 CDK2P24941 298 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 PSMA1P25786 263 aaKnown RBP9.57□□□□□ -0.88
HDAC4-216ENST00000544989 HTR1DP28221 377 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 CD34P28906 385 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 CEACAM3P40198 252 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 PRRX1P54821 245 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 SLC35A2P78381 396 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 ATXN7L3Q14CW9 347 aaPredicted RBP9.57□□□□□ -0.88
HDAC4-216ENST00000544989 TRAM1Q15629 374 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 PIGYQ3MUY2 71 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 PRR31Q5SQ13 230 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 SLC16A12Q6ZSM3 486 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 Q6ZSV7 163 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 ABHD12Q8N2K0 398 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 OR10A7Q8NGE5 316 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 LINC01006Q8NI28 216 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 C17orf50Q8WW18 174 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 PHYHIPQ92561 330 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 UFD1Q92890 307 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 COQ2Q96H96 371 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 DPCDQ9BVM2 203 aaPredicted RBP9.57□□□□□ -0.88
HDAC4-216ENST00000544989 ISYNA1Q9NPH2 558 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 FBLN5Q9UBX5 448 aa9.57□□□□□ -0.88
HDAC4-216ENST00000544989 MRPS28Q9Y2Q9 187 aaKnown RBP9.57□□□□□ -0.88
HDAC4-216ENST00000544989 TRAV8-7A0A075B6U6 113 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 MEIKINA0A087WXM9 373 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 A0A087X0M5 115 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 A0A1B0GX30 115 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 LEUTXA8MZ59 168 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 OOSP1A8MZH6 123 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 TOR1AO14656 332 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 TIMM23O14925 209 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 MAS1P04201 325 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 UBBP0CG47 229 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 GZMHP20718 246 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 SERPINA2P20848 420 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 GABRA5P31644 462 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 GLP1RP43220 463 aa9.56□□□□□ -0.88
HDAC4-216ENST00000544989 RBM39Q14498 530 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms