RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 SAMD12Q8N8I0 201 aa10.83□□□□□ -0.68
DDX11-227ENST00000544652 MAPK1IP1LQ8NDC0 245 aa10.83□□□□□ -0.68
DDX11-227ENST00000544652 COQ2Q96H96 371 aa10.83□□□□□ -0.68
DDX11-227ENST00000544652 DCTN5Q9BTE1 182 aa10.83□□□□□ -0.68
DDX11-227ENST00000544652 CHST6Q9GZX3 395 aa10.83□□□□□ -0.68
DDX11-227ENST00000544652 PPA2Q9H2U2 334 aa10.83□□□□□ -0.68
DDX11-227ENST00000544652 NCOR1P1Q9H4R4 102 aa10.83□□□□□ -0.68
DDX11-227ENST00000544652 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.83□□□□□ -0.68
DDX11-227ENST00000544652 COMMD3Q9UBI1 195 aa10.83□□□□□ -0.68
DDX11-227ENST00000544652 PEX16Q9Y5Y5 336 aa10.83□□□□□ -0.68
DDX11-227ENST00000544652 B4DSR2 109 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 MCRIP1C9JLW8 97 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 MFNGO00587 321 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 EREGO14944 169 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 PHF1O43189 567 aaPredicted RBP10.82□□□□□ -0.68
DDX11-227ENST00000544652 HPGDSO60760 199 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 EIF4EP06730 217 aaKnown RBP10.82□□□□□ -0.68
DDX11-227ENST00000544652 IGHV4-31P0DP07 118 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 NDUFB7P17568 137 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 GZMKP49863 264 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 RSBN1Q5VWQ0 802 aaPredicted RBP10.82□□□□□ -0.68
DDX11-227ENST00000544652 CD276Q5ZPR3 534 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 SLC35E4Q6ICL7 350 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 Q6ZTK2 550 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 GDPD3Q7L5L3 318 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 C6orf201Q7Z4U5 140 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 BPIFB2Q8N4F0 458 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 LINC01356Q8N9X3 169 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 LY6G5BQ8NDX9 201 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 MCFD2Q8NI22 146 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 PLPPR1Q8TBJ4 325 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 ST8SIA4Q92187 359 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 ARHGAP5-AS1Q96IT6 56 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 CYYR1Q96J86 154 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 NEDD4LQ96PU5 975 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 SULT4A1Q9BR01 284 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 PECRQ9BY49 303 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 MIXL1Q9H2W2 232 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 MMP27Q9H306 513 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 RPUSD1Q9UJJ7 312 aaKnown RBP10.82□□□□□ -0.68
DDX11-227ENST00000544652 KCNK7Q9Y2U2 307 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 MYO9AB2RTY4 2548 aa10.82□□□□□ -0.68
DDX11-227ENST00000544652 ITPR3Q14573 2671 aa10.81□□□□□ -0.68
DDX11-227ENST00000544652 TRBV23-1A0A0A0MS06 115 aa10.81□□□□□ -0.68
DDX11-227ENST00000544652 FUOMA2VDF0 154 aa10.81□□□□□ -0.68
DDX11-227ENST00000544652 C22orf46C9J442 243 aa10.81□□□□□ -0.68
DDX11-227ENST00000544652 HSPB6O14558 160 aa10.81□□□□□ -0.68
DDX11-227ENST00000544652 CTDSP2O14595 271 aa10.81□□□□□ -0.68
DDX11-227ENST00000544652 XRCC3O43542 346 aa10.81□□□□□ -0.68
DDX11-227ENST00000544652 CA11O75493 328 aa10.81□□□□□ -0.68
DDX11-227ENST00000544652 MSMBP08118 114 aa10.81□□□□□ -0.68
DDX11-227ENST00000544652 HIST1H1DP16402 221 aaKnown RBP10.81□□□□□ -0.68
DDX11-227ENST00000544652 ELK1P19419 428 aa10.81□□□□□ -0.68
DDX11-227ENST00000544652 ATXN7L3Q14CW9 347 aaPredicted RBP10.81□□□□□ -0.68
DDX11-227ENST00000544652 ARL6IP1Q15041 203 aa10.81□□□□□ -0.68
DDX11-227ENST00000544652 CR1LQ2VPA4 569 aa10.81□□□□□ -0.68
DDX11-227ENST00000544652 ZNF260Q3ZCT1 412 aa10.81□□□□□ -0.68
DDX11-227ENST00000544652 BTN2A1Q7KYR7 527 aa10.81□□□□□ -0.68
DDX11-227ENST00000544652 RTN4RL2Q86UN3 420 aa10.81□□□□□ -0.68
DDX11-227ENST00000544652 MSI2Q96DH6 328 aaKnown RBP10.81□□□□□ -0.68
DDX11-227ENST00000544652 RAB3CQ96E17 227 aa10.81□□□□□ -0.68
DDX11-227ENST00000544652 S100A16Q96FQ6 103 aaKnown RBP10.81□□□□□ -0.68
DDX11-227ENST00000544652 C18orf12Q96KH6 178 aa10.81□□□□□ -0.68
DDX11-227ENST00000544652 FAAP24Q9BTP7 215 aa10.81□□□□□ -0.68
DDX11-227ENST00000544652 DIABLOQ9NR28 239 aa10.81□□□□□ -0.68
DDX11-227ENST00000544652 PLEKHJ1Q9NW61 149 aa10.81□□□□□ -0.68
DDX11-227ENST00000544652 MED13LQ71F56 2210 aa10.81□□□□□ -0.68
DDX11-227ENST00000544652 LOC105371242A0A075B767 164 aa10.8□□□□□ -0.68
DDX11-227ENST00000544652 IGHV2-70DA0A0C4DH43 119 aa10.8□□□□□ -0.68
DDX11-227ENST00000544652 GSTP1P09211 210 aaKnown RBP10.8□□□□□ -0.68
DDX11-227ENST00000544652 FOSL1P15407 271 aa10.8□□□□□ -0.68
DDX11-227ENST00000544652 CDK2P24941 298 aa10.8□□□□□ -0.68
DDX11-227ENST00000544652 DVL1P1P54792 670 aaPredicted RBP10.8□□□□□ -0.68
DDX11-227ENST00000544652 P2RX3P56373 397 aa10.8□□□□□ -0.68
DDX11-227ENST00000544652 LCN2P80188 198 aa10.8□□□□□ -0.68
DDX11-227ENST00000544652 MEF2CQ06413 473 aaPredicted RBP10.8□□□□□ -0.68
DDX11-227ENST00000544652 KRTAP1-1Q07627 177 aa10.8□□□□□ -0.68
DDX11-227ENST00000544652 AESQ08117 197 aa10.8□□□□□ -0.68
DDX11-227ENST00000544652 CNPY1Q3B7I2 92 aa10.8□□□□□ -0.68
DDX11-227ENST00000544652 KRBOX4Q5JUW0 171 aa10.8□□□□□ -0.68
DDX11-227ENST00000544652 NKAPLQ5M9Q1 402 aa10.8□□□□□ -0.68
DDX11-227ENST00000544652 ZNF497Q6ZNH5 498 aa10.8□□□□□ -0.68
DDX11-227ENST00000544652 TCF23Q7RTU1 214 aa10.8□□□□□ -0.68
DDX11-227ENST00000544652 LAX1Q8IWV1 398 aa10.8□□□□□ -0.68
DDX11-227ENST00000544652 CORO2AQ92828 525 aa10.8□□□□□ -0.68
DDX11-227ENST00000544652 WDFY2Q96P53 400 aa10.8□□□□□ -0.68
DDX11-227ENST00000544652 C19orf12Q9NSK7 152 aa10.8□□□□□ -0.68
DDX11-227ENST00000544652 LPAR3Q9UBY5 353 aa10.8□□□□□ -0.68
DDX11-227ENST00000544652 FLNBO75369 2602 aaKnown RBP10.8□□□□□ -0.68
DDX11-227ENST00000544652 TRBV6-6A0A0A6YYG2 114 aa10.79□□□□□ -0.68
DDX11-227ENST00000544652 TRAV20A0A0B4J274 112 aa10.79□□□□□ -0.68
DDX11-227ENST00000544652 KIR2DS1A0A191URI9 304 aa10.79□□□□□ -0.68
DDX11-227ENST00000544652 ODAMA1E959 279 aa10.79□□□□□ -0.68
DDX11-227ENST00000544652 UBE2QL1A1L167 161 aa10.79□□□□□ -0.68
DDX11-227ENST00000544652 SERPINE3A8MV23 424 aa10.79□□□□□ -0.68
DDX11-227ENST00000544652 SMAD7O15105 426 aaKnown RBP10.79□□□□□ -0.68
DDX11-227ENST00000544652 ENSAO43768 121 aaKnown RBP10.79□□□□□ -0.68
DDX11-227ENST00000544652 TPPPO94811 219 aa10.79□□□□□ -0.68
DDX11-227ENST00000544652 NAPSAO96009 420 aa10.79□□□□□ -0.68
DDX11-227ENST00000544652 MT-ND4P03905 459 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms