RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 YTHDF1Q9BYJ9 559 aaKnown RBP7.53□□□□□ -1.2
SNHG1-215ENST00000540904 SLITRK2Q9H156 845 aa7.53□□□□□ -1.2
SNHG1-215ENST00000540904 BANF2Q9H503 90 aa7.53□□□□□ -1.2
SNHG1-215ENST00000540904 ZMAT3Q9HA38 289 aaKnown RBP7.53□□□□□ -1.2
SNHG1-215ENST00000540904 UBE2J1Q9Y385 318 aaPredicted RBP7.53□□□□□ -1.2
SNHG1-215ENST00000540904 MEIKINA0A087WXM9 373 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 MRPS14O60783 128 aaKnown RBP7.52□□□□□ -1.21
SNHG1-215ENST00000540904 CRTAPO75718 401 aaPredicted RBP7.52□□□□□ -1.21
SNHG1-215ENST00000540904 MMP23AO75900 390 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 ARL6IP5O75915 188 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 IGHV4-59P01825 116 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 RBP4P02753 201 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 RNASE1P07998 156 aaKnown RBP7.52□□□□□ -1.21
SNHG1-215ENST00000540904 PSMA1P25786 263 aaKnown RBP7.52□□□□□ -1.21
SNHG1-215ENST00000540904 CALRP27797 417 aaKnown RBP7.52□□□□□ -1.21
SNHG1-215ENST00000540904 LGALS4P56470 323 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 DYNC1I2Q13409 638 aaKnown RBP7.52□□□□□ -1.21
SNHG1-215ENST00000540904 SSX1Q16384 188 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 TAF9Q16594 264 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 MPV17LQ2QL34 196 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 NHLRC3Q5JS37 347 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 ATAD3CQ5T2N8 411 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 GLT8D1Q68CQ7 371 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 C16orf87Q6PH81 154 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 BRICD5Q6PL45 260 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 LINC00596Q86U02 117 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 LYPD6Q86Y78 171 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 LDLRAD3Q86YD5 345 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 SPARTQ8N0X7 666 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 SUMF2Q8NBJ7 301 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 TMEM104Q8NE00 496 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 OR13D1Q8NGV5 346 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 C17orf50Q8WW18 174 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 FAM46BQ96A09 425 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 FOXRED1Q96CU9 486 aaPredicted RBP7.52□□□□□ -1.21
SNHG1-215ENST00000540904 MRPS24Q96EL2 167 aaKnown RBP7.52□□□□□ -1.21
SNHG1-215ENST00000540904 DPCDQ9BVM2 203 aaPredicted RBP7.52□□□□□ -1.21
SNHG1-215ENST00000540904 BARHL1Q9BZE3 327 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 CHIAQ9BZP6 476 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 GAL3ST2Q9H3Q3 398 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 OR6C3Q9NZP0 311 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 KIF25Q9UIL4 384 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 LRRC42Q9Y546 428 aa7.52□□□□□ -1.21
SNHG1-215ENST00000540904 FAM181BA6NEQ2 426 aa7.51□□□□□ -1.21
SNHG1-215ENST00000540904 CLPXO76031 633 aa7.51□□□□□ -1.21
SNHG1-215ENST00000540904 ARG1P05089 322 aa7.51□□□□□ -1.21
SNHG1-215ENST00000540904 MGMTP16455 207 aa7.51□□□□□ -1.21
SNHG1-215ENST00000540904 OMGP23515 440 aa7.51□□□□□ -1.21
SNHG1-215ENST00000540904 CDK2P24941 298 aa7.51□□□□□ -1.21
SNHG1-215ENST00000540904 PAX6P26367 422 aa7.51□□□□□ -1.21
SNHG1-215ENST00000540904 PSMB9P28065 219 aa7.51□□□□□ -1.21
SNHG1-215ENST00000540904 GLP1RP43220 463 aa7.51□□□□□ -1.21
SNHG1-215ENST00000540904 IER3P46695 156 aa7.51□□□□□ -1.21
SNHG1-215ENST00000540904 PRAMEF5Q5TYX0 476 aa7.51□□□□□ -1.21
SNHG1-215ENST00000540904 ZNF773Q6PK81 442 aa7.51□□□□□ -1.21
SNHG1-215ENST00000540904 ZNF565Q8N9K5 539 aa7.51□□□□□ -1.21
SNHG1-215ENST00000540904 PLPPR1Q8TBJ4 325 aa7.51□□□□□ -1.21
SNHG1-215ENST00000540904 NEK7Q8TDX7 302 aa7.51□□□□□ -1.21
SNHG1-215ENST00000540904 TAF15Q92804 592 aaKnown RBP eCLIP7.51□□□□□ -1.21
SNHG1-215ENST00000540904 CORO2AQ92828 525 aa7.51□□□□□ -1.21
SNHG1-215ENST00000540904 SELENOIQ9C0D9 397 aa7.51□□□□□ -1.21
SNHG1-215ENST00000540904 DPAGT1Q9H3H5 408 aa7.51□□□□□ -1.21
SNHG1-215ENST00000540904 IFT22Q9H7X7 185 aa7.51□□□□□ -1.21
SNHG1-215ENST00000540904 TAS2R3Q9NYW6 316 aa7.51□□□□□ -1.21
SNHG1-215ENST00000540904 ZNRD1Q9P1U0 126 aa7.51□□□□□ -1.21
SNHG1-215ENST00000540904 GHRLQ9UBU3 117 aa7.51□□□□□ -1.21
SNHG1-215ENST00000540904 SESN1Q9Y6P5 492 aa7.51□□□□□ -1.21
SNHG1-215ENST00000540904 COL6A5A8TX70 2615 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 IGHV2-26A0A0B4J1V2 119 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 TMEM89A2RUT3 159 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 FAM172BPA6NC97 362 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 BTBD17A6NE02 478 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 ZNF729A6NN14 1252 aaPredicted RBP7.5□□□□□ -1.21
SNHG1-215ENST00000540904 MCRIP1C9JLW8 97 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 MPIG6BO95866 241 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 CRYBA1P05813 215 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 UBBP0CG47 229 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 HTR2CP28335 458 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 KCNJ3P48549 501 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 C1orf100Q5SVJ3 147 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 UBE2UQ5VVX9 321 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 RSBN1Q5VWQ0 802 aaPredicted RBP7.5□□□□□ -1.21
SNHG1-215ENST00000540904 ZNF626Q68DY1 528 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 OR10K2Q6IF99 312 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 BAIAP2L2Q6UXY1 529 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 HEPN1Q6WQI6 88 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 C12orf54Q6X4T0 127 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 LHFPL4Q7Z7J7 247 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 TMEM86BQ8N661 226 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 BEND2Q8NDZ0 799 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 OR11H6Q8NGC7 330 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 OR13A1Q8NGR1 328 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 MRGPRDQ8TDS7 321 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 FCGR1BQ92637 280 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 AJUBAQ96IF1 538 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 CST11Q9H112 138 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 TMEM133Q9H2Q1 129 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 PLGRKTQ9HBL7 147 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 SPACA1Q9HBV2 294 aa7.5□□□□□ -1.21
SNHG1-215ENST00000540904 NDUFB11Q9NX14 153 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms