RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 ODF4Q2M2E3 257 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 HLA-DRB5Q30154 266 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 DMKNQ6E0U4 476 aaPredicted RBP8.38□□□□□ -1.07
CSDE1-217ENST00000534699 TRAPPC6BQ86SZ2 158 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 PDZD9Q8IXQ8 264 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 RDH10Q8IZV5 341 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 ABHD12Q8N2K0 398 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 OR4F17Q8NGA8 305 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 CNIH3Q8TBE1 160 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 OR4F4Q96R69 305 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 S100A13Q99584 98 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 IDI2-AS1Q9NZ38 188 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 GSTK1Q9Y2Q3 226 aa8.38□□□□□ -1.07
CSDE1-217ENST00000534699 FAM90A9PA6NNJ1 464 aa8.37□□□□□ -1.07
CSDE1-217ENST00000534699 GABRPO00591 440 aa8.37□□□□□ -1.07
CSDE1-217ENST00000534699 TXNL1O43396 289 aa8.37□□□□□ -1.07
CSDE1-217ENST00000534699 UBBP0CG47 229 aa8.37□□□□□ -1.07
CSDE1-217ENST00000534699 ZNF44P15621 663 aa8.37□□□□□ -1.07
CSDE1-217ENST00000534699 KRTAP10-3P60369 221 aa8.37□□□□□ -1.07
CSDE1-217ENST00000534699 GPR50Q13585 617 aa8.37□□□□□ -1.07
CSDE1-217ENST00000534699 RSU1Q15404 277 aa8.37□□□□□ -1.07
CSDE1-217ENST00000534699 Q499Y3 187 aa8.37□□□□□ -1.07
CSDE1-217ENST00000534699 COMMD1Q8N668 190 aa8.37□□□□□ -1.07
CSDE1-217ENST00000534699 OR4P4Q8NGL7 312 aa8.37□□□□□ -1.07
CSDE1-217ENST00000534699 NDNFQ8TB73 568 aa8.37□□□□□ -1.07
CSDE1-217ENST00000534699 ZNF580Q9UK33 172 aa8.37□□□□□ -1.07
CSDE1-217ENST00000534699 CCRL2O00421 344 aa8.37□□□□□ -1.07
CSDE1-217ENST00000534699 IL1AP01583 271 aa8.37□□□□□ -1.07
CSDE1-217ENST00000534699 TFF1P04155 84 aa8.37□□□□□ -1.07
CSDE1-217ENST00000534699 CAPGP40121 348 aa8.37□□□□□ -1.07
CSDE1-217ENST00000534699 TPTE2P1Q5T6R2 138 aa8.37□□□□□ -1.07
CSDE1-217ENST00000534699 PHYHIPQ92561 330 aa8.37□□□□□ -1.07
CSDE1-217ENST00000534699 RBM14Q96PK6 669 aaKnown RBP8.37□□□□□ -1.07
CSDE1-217ENST00000534699 GPER1Q99527 375 aa8.37□□□□□ -1.07
CSDE1-217ENST00000534699 CHCHD6Q9BRQ6 235 aa8.37□□□□□ -1.07
CSDE1-217ENST00000534699 UQCC2Q9BRT2 126 aa8.37□□□□□ -1.07
CSDE1-217ENST00000534699 ISG20L2Q9H9L3 353 aaKnown RBP8.37□□□□□ -1.07
CSDE1-217ENST00000534699 TRBV5-7A0A0A0MS05 114 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 A6NIN4 97 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 BUB1B-PAK6H3BSN5 160 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 FGF16O43320 207 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 FBXO24O75426 580 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 FAM106CPP0CH98 169 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 IL3RAP26951 378 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 ZNF816Q0VGE8 651 aaPredicted RBP8.36□□□□□ -1.07
CSDE1-217ENST00000534699 EDDM3AQ14507 147 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 C8orf59Q8N0T1 100 aaPredicted RBP8.36□□□□□ -1.07
CSDE1-217ENST00000534699 OSR2Q8N2R0 312 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 STX19Q8N4C7 294 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 MS4A15Q8N5U1 240 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 KLHDC1Q8N7A1 406 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 TNFAIP8L1Q8WVP5 186 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 TMEM30CPA0ZSE6 113 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 SIRPB1O00241 398 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 BAG2O95816 211 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 CSTBP04080 98 aaKnown RBP8.36□□□□□ -1.07
CSDE1-217ENST00000534699 DYNC1I2Q13409 638 aaKnown RBP8.36□□□□□ -1.07
CSDE1-217ENST00000534699 PAN3Q58A45 887 aaKnown RBP8.36□□□□□ -1.07
CSDE1-217ENST00000534699 OGFRL1Q5TC84 451 aaPredicted RBP8.36□□□□□ -1.07
CSDE1-217ENST00000534699 RSBN1Q5VWQ0 802 aaPredicted RBP8.36□□□□□ -1.07
CSDE1-217ENST00000534699 ZNF485Q8NCK3 441 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 OR8H1Q8NGG4 311 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 OR10AC1Q8NH08 325 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 COQ2Q96H96 371 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 MMP28Q9H239 520 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 ISYNA1Q9NPH2 558 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 SERTAD4Q9NUC0 356 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 FKBP14Q9NWM8 211 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 ZMAT5Q9UDW3 170 aaKnown RBP8.36□□□□□ -1.07
CSDE1-217ENST00000534699 A0A1W2PRD5 423 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 A0A1W2PRF3 423 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 A0A1W2PRM7 423 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 DUS4LO95620 317 aaKnown RBP8.36□□□□□ -1.07
CSDE1-217ENST00000534699 ZNF93P35789 620 aaPredicted RBP8.36□□□□□ -1.07
CSDE1-217ENST00000534699 GLP1RP43220 463 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 VDAC2P45880 294 aaPredicted RBP8.36□□□□□ -1.07
CSDE1-217ENST00000534699 RBM11P57052 281 aaKnown RBP8.36□□□□□ -1.07
CSDE1-217ENST00000534699 RIPK1Q13546 671 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 EBI3Q14213 229 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 HABP2Q14520 560 aaPredicted RBP8.36□□□□□ -1.07
CSDE1-217ENST00000534699 TRAM1Q15629 374 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 C17orf58Q2M2W7 97 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 C6orf183Q5T699 404 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 STEAP3Q658P3 488 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 GAPTQ8N292 157 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 OR51A4Q8NGJ6 313 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 CALYQ9NYX4 217 aa8.36□□□□□ -1.07
CSDE1-217ENST00000534699 WIPF1O43516 503 aa8.35□□□□□ -1.07
CSDE1-217ENST00000534699 CHST1O43916 411 aa8.35□□□□□ -1.07
CSDE1-217ENST00000534699 CD37P11049 281 aa8.35□□□□□ -1.07
CSDE1-217ENST00000534699 GTF2F2P13984 249 aa8.35□□□□□ -1.07
CSDE1-217ENST00000534699 CDK2P24941 298 aa8.35□□□□□ -1.07
CSDE1-217ENST00000534699 ETV1P50549 477 aa8.35□□□□□ -1.07
CSDE1-217ENST00000534699 DOC2BQ14184 412 aa8.35□□□□□ -1.07
CSDE1-217ENST00000534699 SSX2Q16385 188 aa8.35□□□□□ -1.07
CSDE1-217ENST00000534699 ZNF782Q6ZMW2 699 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-217ENST00000534699 LHFPL4Q7Z7J7 247 aa8.35□□□□□ -1.07
CSDE1-217ENST00000534699 TMEM106AQ96A25 262 aa8.35□□□□□ -1.07
CSDE1-217ENST00000534699 RCC2Q9P258 522 aaKnown RBP8.35□□□□□ -1.07
CSDE1-217ENST00000534699 PSORS1C1Q9UIG5 152 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms