RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 RAB12Q6IQ22 244 aa18.36■□□□□ 0.53
LRRK1-208ENST00000532029 CLVS1Q8IUQ0 354 aaPredicted RBP18.36■□□□□ 0.53
LRRK1-208ENST00000532029 CROCCP3Q8IVE0 287 aa18.36■□□□□ 0.53
LRRK1-208ENST00000532029 WDFY2Q96P53 400 aa18.36■□□□□ 0.53
LRRK1-208ENST00000532029 NEDD4LQ96PU5 975 aa18.36■□□□□ 0.53
LRRK1-208ENST00000532029 PCGF1Q9BSM1 259 aa18.36■□□□□ 0.53
LRRK1-208ENST00000532029 LPAR5Q9H1C0 372 aa18.36■□□□□ 0.53
LRRK1-208ENST00000532029 RCC2Q9P258 522 aaKnown RBP18.36■□□□□ 0.53
LRRK1-208ENST00000532029 TLN2Q9Y4G6 2542 aa18.36■□□□□ 0.53
LRRK1-208ENST00000532029 MTORP42345 2549 aa18.35■□□□□ 0.53
LRRK1-208ENST00000532029 A0A0B4J203 849 aa18.35■□□□□ 0.53
LRRK1-208ENST00000532029 PDCD6O75340 191 aa18.35■□□□□ 0.53
LRRK1-208ENST00000532029 RPS19P39019 145 aaKnown RBP18.35■□□□□ 0.53
LRRK1-208ENST00000532029 FAM189A2Q15884 450 aa18.35■□□□□ 0.53
LRRK1-208ENST00000532029 CHRFAM7AQ494W8 412 aa18.35■□□□□ 0.53
LRRK1-208ENST00000532029 NKAPLQ5M9Q1 402 aa18.35■□□□□ 0.53
LRRK1-208ENST00000532029 IDNKQ5T6J7 187 aa18.35■□□□□ 0.53
LRRK1-208ENST00000532029 TRAPPC6BQ86SZ2 158 aa18.35■□□□□ 0.53
LRRK1-208ENST00000532029 NANPQ8TBE9 248 aa18.35■□□□□ 0.53
LRRK1-208ENST00000532029 COQ2Q96H96 371 aa18.35■□□□□ 0.53
LRRK1-208ENST00000532029 NICN1Q9BSH3 213 aa18.35■□□□□ 0.53
LRRK1-208ENST00000532029 M0R1W7 72 aa18.34■□□□□ 0.53
LRRK1-208ENST00000532029 LDLRAD4O15165 306 aa18.34■□□□□ 0.53
LRRK1-208ENST00000532029 GLAP06280 429 aa18.34■□□□□ 0.53
LRRK1-208ENST00000532029 GLIPR1P48060 266 aa18.34■□□□□ 0.53
LRRK1-208ENST00000532029 ZNF273Q14593 569 aa18.34■□□□□ 0.53
LRRK1-208ENST00000532029 CTF1Q16619 201 aa18.34■□□□□ 0.53
LRRK1-208ENST00000532029 BRICD5Q6PL45 260 aa18.34■□□□□ 0.53
LRRK1-208ENST00000532029 C1orf229Q6ZS94 237 aaPredicted RBP18.34■□□□□ 0.53
LRRK1-208ENST00000532029 UPRTQ96BW1 309 aa18.34■□□□□ 0.53
LRRK1-208ENST00000532029 SIRPDQ9H106 197 aa18.34■□□□□ 0.53
LRRK1-208ENST00000532029 LINC00312Q9Y6C7 94 aa18.34■□□□□ 0.53
LRRK1-208ENST00000532029 TRGV10A0A0A0MS01 117 aa18.33■□□□□ 0.52
LRRK1-208ENST00000532029 hCG_1809904A0A1W2PP81 198 aa18.33■□□□□ 0.52
LRRK1-208ENST00000532029 A0A1W2PPE2 198 aa18.33■□□□□ 0.52
LRRK1-208ENST00000532029 A0A1W2PR64 198 aa18.33■□□□□ 0.52
LRRK1-208ENST00000532029 A0A1W2PRV1 198 aa18.33■□□□□ 0.52
LRRK1-208ENST00000532029 ODAMA1E959 279 aa18.33■□□□□ 0.52
LRRK1-208ENST00000532029 NOL3O60936 208 aaKnown RBP18.33■□□□□ 0.52
LRRK1-208ENST00000532029 TMEM127O75204 238 aa18.33■□□□□ 0.52
LRRK1-208ENST00000532029 CRLF1O75462 422 aa18.33■□□□□ 0.52
LRRK1-208ENST00000532029 SNRPBP14678 240 aaKnown RBP18.33■□□□□ 0.52
LRRK1-208ENST00000532029 RAB6AP20340 208 aa18.33■□□□□ 0.52
LRRK1-208ENST00000532029 BLVRBP30043 206 aaPredicted RBP18.33■□□□□ 0.52
LRRK1-208ENST00000532029 SIGIRRQ6IA17 410 aa18.33■□□□□ 0.52
LRRK1-208ENST00000532029 OR56B1Q8NGI3 324 aa18.33■□□□□ 0.52
LRRK1-208ENST00000532029 PLPPR1Q8TBJ4 325 aa18.33■□□□□ 0.52
LRRK1-208ENST00000532029 MEIKINA0A087WXM9 373 aa18.32■□□□□ 0.52
LRRK1-208ENST00000532029 TMEM30CPA0ZSE6 113 aa18.32■□□□□ 0.52
LRRK1-208ENST00000532029 MEX3AA1L020 520 aaKnown RBP18.32■□□□□ 0.52
LRRK1-208ENST00000532029 ZNF728P0DKX0 622 aa18.32■□□□□ 0.52
LRRK1-208ENST00000532029 MMP9P14780 707 aa18.32■□□□□ 0.52
LRRK1-208ENST00000532029 CCL3L1P16619 93 aa18.32■□□□□ 0.52
LRRK1-208ENST00000532029 VEGFCP49767 419 aa18.32■□□□□ 0.52
LRRK1-208ENST00000532029 RSBN1Q5VWQ0 802 aaPredicted RBP18.32■□□□□ 0.52
LRRK1-208ENST00000532029 C1orf122Q6ZSJ8 110 aa18.32■□□□□ 0.52
LRRK1-208ENST00000532029 USP43Q70EL4 1123 aa18.32■□□□□ 0.52
LRRK1-208ENST00000532029 VMO1Q7Z5L0 202 aa18.32■□□□□ 0.52
LRRK1-208ENST00000532029 FAM89BQ8N5H3 189 aa18.32■□□□□ 0.52
LRRK1-208ENST00000532029 LGALS14Q8TCE9 139 aa18.32■□□□□ 0.52
LRRK1-208ENST00000532029 RAB2BQ8WUD1 216 aa18.32■□□□□ 0.52
LRRK1-208ENST00000532029 PTX4Q96A99 478 aa18.32■□□□□ 0.52
LRRK1-208ENST00000532029 ZNF714Q96N38 554 aa18.32■□□□□ 0.52
LRRK1-208ENST00000532029 TBX15Q96SF7 602 aa18.32■□□□□ 0.52
LRRK1-208ENST00000532029 ETAA1Q9NY74 926 aa18.32■□□□□ 0.52
LRRK1-208ENST00000532029 OR6C3Q9NZP0 311 aa18.32■□□□□ 0.52
LRRK1-208ENST00000532029 KIF25Q9UIL4 384 aa18.32■□□□□ 0.52
LRRK1-208ENST00000532029 UBE2J1Q9Y385 318 aaPredicted RBP18.32■□□□□ 0.52
LRRK1-208ENST00000532029 A0A0A6YYD4 124 aa18.31■□□□□ 0.52
LRRK1-208ENST00000532029 UBE2QL1A1L167 161 aa18.31■□□□□ 0.52
LRRK1-208ENST00000532029 METTL21EPA6NDL7 271 aa18.31■□□□□ 0.52
LRRK1-208ENST00000532029 SRD5A1P18405 259 aa18.31■□□□□ 0.52
LRRK1-208ENST00000532029 CHATP28329 748 aa18.31■□□□□ 0.52
LRRK1-208ENST00000532029 EFNB2P52799 333 aa18.31■□□□□ 0.52
LRRK1-208ENST00000532029 TMBIM6P55061 237 aa18.31■□□□□ 0.52
LRRK1-208ENST00000532029 SCAND1P57086 179 aa18.31■□□□□ 0.52
LRRK1-208ENST00000532029 PAX5Q02548 391 aa18.31■□□□□ 0.52
LRRK1-208ENST00000532029 PLA2G7Q13093 441 aa18.31■□□□□ 0.52
LRRK1-208ENST00000532029 SLC35E4Q6ICL7 350 aa18.31■□□□□ 0.52
LRRK1-208ENST00000532029 TCF23Q7RTU1 214 aa18.31■□□□□ 0.52
LRRK1-208ENST00000532029 Q8N7P7 452 aa18.31■□□□□ 0.52
LRRK1-208ENST00000532029 DCSTAMPQ9H295 470 aa18.31■□□□□ 0.52
LRRK1-208ENST00000532029 NCOR1P1Q9H4R4 102 aa18.31■□□□□ 0.52
LRRK1-208ENST00000532029 METTL8Q9H825 291 aaKnown RBP18.31■□□□□ 0.52
LRRK1-208ENST00000532029 SIRT7Q9NRC8 400 aa18.31■□□□□ 0.52
LRRK1-208ENST00000532029 ABRACLQ9P1F3 81 aa18.31■□□□□ 0.52
LRRK1-208ENST00000532029 TRAV40A0A0B4J280 105 aa18.3■□□□□ 0.52
LRRK1-208ENST00000532029 SOCS1O15524 211 aa18.3■□□□□ 0.52
LRRK1-208ENST00000532029 PAHP00439 452 aa18.3■□□□□ 0.52
LRRK1-208ENST00000532029 C6orf201Q7Z4U5 140 aa18.3■□□□□ 0.52
LRRK1-208ENST00000532029 CORO2AQ92828 525 aa18.3■□□□□ 0.52
LRRK1-208ENST00000532029 SLC25A46Q96AG3 418 aa18.3■□□□□ 0.52
LRRK1-208ENST00000532029 BCL7BQ9BQE9 202 aa18.3■□□□□ 0.52
LRRK1-208ENST00000532029 GAL3ST2Q9H3Q3 398 aa18.3■□□□□ 0.52
LRRK1-208ENST00000532029 PLEKHJ1Q9NW61 149 aa18.3■□□□□ 0.52
LRRK1-208ENST00000532029 ETV7Q9Y603 341 aa18.3■□□□□ 0.52
LRRK1-208ENST00000532029 CA11O75493 328 aa18.29■□□□□ 0.52
LRRK1-208ENST00000532029 PRTN3P24158 256 aa18.29■□□□□ 0.52
LRRK1-208ENST00000532029 GLP1RP43220 463 aa18.29■□□□□ 0.52
LRRK1-208ENST00000532029 RIPPLY3P57055 190 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms