RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 PDK2Q15119 407 aa2.68□□□□□ -1.98
C11orf88-204ENST00000529661 C4orf26Q17RF5 130 aa2.68□□□□□ -1.98
C11orf88-204ENST00000529661 OPN5Q6U736 354 aa2.68□□□□□ -1.98
C11orf88-204ENST00000529661 TRAPPC5Q8IUR0 188 aa2.68□□□□□ -1.98
C11orf88-204ENST00000529661 OR5B17Q8NGF7 314 aa2.68□□□□□ -1.98
C11orf88-204ENST00000529661 DCAKDQ8WVC6 231 aa2.68□□□□□ -1.98
C11orf88-204ENST00000529661 C22orf15Q8WYQ4 148 aa2.68□□□□□ -1.98
C11orf88-204ENST00000529661 GHSRQ92847 366 aa2.68□□□□□ -1.98
C11orf88-204ENST00000529661 RAB8BQ92930 207 aa2.68□□□□□ -1.98
C11orf88-204ENST00000529661 TESCQ96BS2 214 aa2.68□□□□□ -1.98
C11orf88-204ENST00000529661 TLCD1Q96CP7 247 aa2.68□□□□□ -1.98
C11orf88-204ENST00000529661 OPTNQ96CV9 577 aa2.68□□□□□ -1.98
C11orf88-204ENST00000529661 SMIM12Q96EX1 92 aa2.68□□□□□ -1.98
C11orf88-204ENST00000529661 KCNS1Q96KK3 526 aa2.68□□□□□ -1.98
C11orf88-204ENST00000529661 PACRGQ96M98 296 aaPredicted RBP2.68□□□□□ -1.98
C11orf88-204ENST00000529661 SPIN2AQ99865 258 aa2.68□□□□□ -1.98
C11orf88-204ENST00000529661 RNF5Q99942 180 aa2.68□□□□□ -1.98
C11orf88-204ENST00000529661 SPIN2BQ9BPZ2 258 aa2.68□□□□□ -1.98
C11orf88-204ENST00000529661 SELENOSQ9BQE4 189 aa2.68□□□□□ -1.98
C11orf88-204ENST00000529661 TMEM208Q9BTX3 173 aa2.68□□□□□ -1.98
C11orf88-204ENST00000529661 CDCA4Q9BXL8 241 aa2.68□□□□□ -1.98
C11orf88-204ENST00000529661 CYTL1Q9NRR1 136 aa2.68□□□□□ -1.98
C11orf88-204ENST00000529661 SNX10Q9Y5X0 201 aa2.68□□□□□ -1.98
C11orf88-204ENST00000529661 NPHP4O75161 1426 aaPredicted RBP2.68□□□□□ -1.98
C11orf88-204ENST00000529661 EVC2Q86UK5 1308 aa2.68□□□□□ -1.98
C11orf88-204ENST00000529661 KMT2EQ8IZD2 1858 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 IGKV6-21A0A0C4DH24 114 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 LRCOL1A6NCL2 159 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 I3L4J1 428 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 UPK2O00526 184 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 STX10O60499 249 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 CCNKO75909 580 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 IGLV2-8P01709 118 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 IGLV3-25P01717 112 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 IFNA16P05015 189 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 ATF1P18846 271 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 PRPS1L1P21108 318 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 ME2P23368 584 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 GRPRP30550 384 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 IFNGR2P38484 337 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 HBG1P69891 147 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 HBG2P69892 147 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 AESQ08117 197 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 SHHQ15465 462 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 YIF1BQ5BJH7 314 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 CLEC12AQ5QGZ9 265 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 FAM162BQ5T6X4 162 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 GUSBP11Q6P575 273 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 ZFP82Q8N141 532 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 ZCCHC24Q8N2G6 241 aaKnown RBP2.67□□□□□ -1.98
C11orf88-204ENST00000529661 DRAM1Q8N682 238 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 OR1M1Q8NGA1 313 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 HAVCR2Q8TDQ0 301 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 CASTOR1Q8WTX7 329 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 SLC25A46Q96AG3 418 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 QKIQ96PU8 341 aaKnown RBP eCLIP2.67□□□□□ -1.98
C11orf88-204ENST00000529661 FAAP24Q9BTP7 215 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 TAPBPLQ9BX59 468 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 SUCNR1Q9BXA5 334 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 POMKQ9H5K3 350 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 SLC2A9Q9NRM0 540 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 FAM206AQ9NX38 181 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 PRO0628Q9UI54 55 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 MYO15BQ96JP2 1530 aa2.67□□□□□ -1.98
C11orf88-204ENST00000529661 PLA2R1Q13018 1463 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 A0A1W2PP64 1363 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 IGKV2-28A0A075B6P5 120 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 A0A1B0GXF2 115 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 RBFOX3A6NFN3 312 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 E5RI56 91 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 KCNK1O00180 336 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 UPK1AO00322 258 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 DENRO43583 198 aaKnown RBP2.66□□□□□ -1.98
C11orf88-204ENST00000529661 IGKV2D-28P01615 120 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 IGKV5-2P06315 115 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 HIST1H1EP10412 219 aaKnown RBP2.66□□□□□ -1.98
C11orf88-204ENST00000529661 PSMA1P25786 263 aaKnown RBP2.66□□□□□ -1.98
C11orf88-204ENST00000529661 OMPP47874 163 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 LGALS7P47929 136 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 SERPINB9P50453 376 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 PRDX1Q06830 199 aaKnown RBP2.66□□□□□ -1.98
C11orf88-204ENST00000529661 SRSF6Q13247 344 aaKnown RBP2.66□□□□□ -1.98
C11orf88-204ENST00000529661 FBXL19-AS1Q494R0 122 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 C6orf99Q4VX62 202 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 ABCA11PQ4W5N1 156 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 TEX30Q5JUR7 227 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 CST9Q5W186 159 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 CLEC19AQ6UXS0 136 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 H1FOOQ8IZA3 346 aaPredicted RBP2.66□□□□□ -1.98
C11orf88-204ENST00000529661 STK40Q8N2I9 435 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 RIBC1Q8N443 379 aaPredicted RBP2.66□□□□□ -1.98
C11orf88-204ENST00000529661 ZNF645Q8N7E2 425 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 CCNYL1Q8N7R7 359 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 GATD1Q8NB37 220 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 SLC26A10Q8NG04 563 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 GPR32P1Q8NGA4 272 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 OR1L1Q8NH94 360 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 C16orf78Q8WTQ4 265 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 ASB13Q8WXK3 278 aa2.66□□□□□ -1.98
C11orf88-204ENST00000529661 MRPL48Q96GC5 212 aaKnown RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms