RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 NUDT19A8MXV4 375 aa18.6■□□□□ 0.57
CPSF1-202ENST00000527827 J3QR06 171 aa18.6■□□□□ 0.57
CPSF1-202ENST00000527827 DEGS1O15121 323 aa18.6■□□□□ 0.57
CPSF1-202ENST00000527827 IGHV3-7P01780 117 aa18.6■□□□□ 0.57
CPSF1-202ENST00000527827 SLC6A1P30531 599 aa18.6■□□□□ 0.57
CPSF1-202ENST00000527827 DIAPH2-AS1Q14236 149 aa18.6■□□□□ 0.57
CPSF1-202ENST00000527827 ZDHHC13Q8IUH4 622 aa18.6■□□□□ 0.57
CPSF1-202ENST00000527827 KLHL30-AS1Q8NEE0 82 aa18.6■□□□□ 0.57
CPSF1-202ENST00000527827 OR8J1Q8NGP2 316 aa18.6■□□□□ 0.57
CPSF1-202ENST00000527827 LEAP2Q969E1 77 aa18.6■□□□□ 0.57
CPSF1-202ENST00000527827 NEK6Q9HC98 313 aa18.6■□□□□ 0.57
CPSF1-202ENST00000527827 AMMECR1Q9Y4X0 333 aaPredicted RBP18.6■□□□□ 0.57
CPSF1-202ENST00000527827 H0YHG0 523 aa18.59■□□□□ 0.57
CPSF1-202ENST00000527827 OCM2P0CE71 109 aa18.59■□□□□ 0.57
CPSF1-202ENST00000527827 OCMP0CE72 109 aaPredicted RBP18.59■□□□□ 0.57
CPSF1-202ENST00000527827 TMEM11P17152 192 aa18.59■□□□□ 0.57
CPSF1-202ENST00000527827 DGCR2P98153 550 aa18.59■□□□□ 0.57
CPSF1-202ENST00000527827 UNQ9370/PRO34162Q6UXP9 181 aa18.59■□□□□ 0.57
CPSF1-202ENST00000527827 OR51T1Q8NGJ9 327 aa18.59■□□□□ 0.57
CPSF1-202ENST00000527827 OR13A1Q8NGR1 328 aa18.59■□□□□ 0.57
CPSF1-202ENST00000527827 HRASLS5Q96KN8 279 aa18.59■□□□□ 0.57
CPSF1-202ENST00000527827 CALYQ9NYX4 217 aa18.59■□□□□ 0.57
CPSF1-202ENST00000527827 SERPINE3A8MV23 424 aa18.58■□□□□ 0.56
CPSF1-202ENST00000527827 FGF16O43320 207 aa18.58■□□□□ 0.56
CPSF1-202ENST00000527827 GLP1RP43220 463 aa18.58■□□□□ 0.56
CPSF1-202ENST00000527827 HES1Q14469 280 aa18.58■□□□□ 0.56
CPSF1-202ENST00000527827 HNF4GQ14541 408 aa18.58■□□□□ 0.56
CPSF1-202ENST00000527827 OR13C3Q8NGS6 347 aa18.58■□□□□ 0.56
CPSF1-202ENST00000527827 RFKQ969G6 155 aa18.58■□□□□ 0.56
CPSF1-202ENST00000527827 DUX3Q96PT4 197 aa18.58■□□□□ 0.56
CPSF1-202ENST00000527827 GABARAPL3Q9BY60 117 aa18.58■□□□□ 0.56
CPSF1-202ENST00000527827 LINC00574Q9H8X3 128 aa18.58■□□□□ 0.56
CPSF1-202ENST00000527827 KIF25Q9UIL4 384 aa18.58■□□□□ 0.56
CPSF1-202ENST00000527827 PSG11Q9UQ72 335 aa18.58■□□□□ 0.56
CPSF1-202ENST00000527827 MYRFQ9Y2G1 1151 aa18.58■□□□□ 0.56
CPSF1-202ENST00000527827 J3QRE1 110 aa18.57■□□□□ 0.56
CPSF1-202ENST00000527827 IGHG2P01859 326 aa18.57■□□□□ 0.56
CPSF1-202ENST00000527827 CCR9P51686 369 aa18.57■□□□□ 0.56
CPSF1-202ENST00000527827 ZP1P60852 638 aa18.57■□□□□ 0.56
CPSF1-202ENST00000527827 BNIP1Q12981 228 aa18.57■□□□□ 0.56
CPSF1-202ENST00000527827 KCTD20Q7Z5Y7 419 aa18.57■□□□□ 0.56
CPSF1-202ENST00000527827 SLC35E3Q7Z769 313 aa18.57■□□□□ 0.56
CPSF1-202ENST00000527827 AMIGO2Q86SJ2 522 aa18.57■□□□□ 0.56
CPSF1-202ENST00000527827 ZNF695Q8IW36 515 aa18.57■□□□□ 0.56
CPSF1-202ENST00000527827 COMMD1Q8N668 190 aa18.57■□□□□ 0.56
CPSF1-202ENST00000527827 TFAP2CQ92754 450 aa18.57■□□□□ 0.56
CPSF1-202ENST00000527827 RIBC2Q9H4K1 309 aa18.57■□□□□ 0.56
CPSF1-202ENST00000527827 NCOR1P1Q9H4R4 102 aa18.57■□□□□ 0.56
CPSF1-202ENST00000527827 IDI2-AS1Q9NZ38 188 aa18.57■□□□□ 0.56
CPSF1-202ENST00000527827 MEIKINA0A087WXM9 373 aa18.56■□□□□ 0.56
CPSF1-202ENST00000527827 LINC01548A6NM66 108 aa18.56■□□□□ 0.56
CPSF1-202ENST00000527827 OR4C45A6NMZ5 311 aa18.56■□□□□ 0.56
CPSF1-202ENST00000527827 H0YJX3 145 aa18.56■□□□□ 0.56
CPSF1-202ENST00000527827 HSPB6O14558 160 aa18.56■□□□□ 0.56
CPSF1-202ENST00000527827 IGKV1D-33P01593 117 aa18.56■□□□□ 0.56
CPSF1-202ENST00000527827 IGKV1-33P01594 117 aa18.56■□□□□ 0.56
CPSF1-202ENST00000527827 HTR1AP08908 422 aa18.56■□□□□ 0.56
CPSF1-202ENST00000527827 FASP25445 335 aa18.56■□□□□ 0.56
CPSF1-202ENST00000527827 SLC35B1P78383 322 aa18.56■□□□□ 0.56
CPSF1-202ENST00000527827 MADCAM1Q13477 382 aa18.56■□□□□ 0.56
CPSF1-202ENST00000527827 OR8H3Q8N146 312 aa18.56■□□□□ 0.56
CPSF1-202ENST00000527827 STPG2Q8N412 459 aa18.56■□□□□ 0.56
CPSF1-202ENST00000527827 ZNF565Q8N9K5 539 aa18.56■□□□□ 0.56
CPSF1-202ENST00000527827 RAX2Q96IS3 184 aa18.56■□□□□ 0.56
CPSF1-202ENST00000527827 OSBPL10Q9BXB5 764 aa18.56■□□□□ 0.56
CPSF1-202ENST00000527827 ZCCHC4Q9H5U6 513 aa18.56■□□□□ 0.56
CPSF1-202ENST00000527827 ZMAT5Q9UDW3 170 aaKnown RBP18.56■□□□□ 0.56
CPSF1-202ENST00000527827 TRAV24A0A0B4J272 114 aa18.55■□□□□ 0.56
CPSF1-202ENST00000527827 NPIPB11E5RHQ5 1161 aa18.55■□□□□ 0.56
CPSF1-202ENST00000527827 SLC16A6O15403 523 aa18.55■□□□□ 0.56
CPSF1-202ENST00000527827 IL1AP01583 271 aa18.55■□□□□ 0.56
CPSF1-202ENST00000527827 NHLRC4P0CG21 123 aaPredicted RBP18.55■□□□□ 0.56
CPSF1-202ENST00000527827 TMEM225BP0DP42 221 aa18.55■□□□□ 0.56
CPSF1-202ENST00000527827 RAB7AP51149 207 aa18.55■□□□□ 0.56
CPSF1-202ENST00000527827 PELI1Q96FA3 418 aa18.55■□□□□ 0.56
CPSF1-202ENST00000527827 LSM4Q9Y4Z0 139 aaKnown RBP18.55■□□□□ 0.56
CPSF1-202ENST00000527827 U3KQK5 164 aa18.55■□□□□ 0.56
CPSF1-202ENST00000527827 DAPL1A0PJW8 107 aa18.54■□□□□ 0.56
CPSF1-202ENST00000527827 DBTP11182 482 aaKnown RBP18.54■□□□□ 0.56
CPSF1-202ENST00000527827 C21orf33P30042 268 aaPredicted RBP18.54■□□□□ 0.56
CPSF1-202ENST00000527827 MTNR1BP49286 362 aa18.54■□□□□ 0.56
CPSF1-202ENST00000527827 GNG10P50151 68 aa18.54■□□□□ 0.56
CPSF1-202ENST00000527827 KISS1Q15726 138 aa18.54■□□□□ 0.56
CPSF1-202ENST00000527827 LTC4SQ16873 150 aa18.54■□□□□ 0.56
CPSF1-202ENST00000527827 PAN3Q58A45 887 aaKnown RBP18.54■□□□□ 0.56
CPSF1-202ENST00000527827 FOXRED2Q8IWF2 684 aa18.54■□□□□ 0.56
CPSF1-202ENST00000527827 RFESDQ8TAC1 157 aa18.54■□□□□ 0.56
CPSF1-202ENST00000527827 HAVCR2Q8TDQ0 301 aa18.54■□□□□ 0.56
CPSF1-202ENST00000527827 AP4S1Q9Y587 144 aa18.54■□□□□ 0.56
CPSF1-202ENST00000527827 CCL24O00175 119 aa18.53■□□□□ 0.56
CPSF1-202ENST00000527827 RAMP3O60896 148 aa18.53■□□□□ 0.56
CPSF1-202ENST00000527827 HCKP08631 526 aa18.53■□□□□ 0.56
CPSF1-202ENST00000527827 EBI3Q14213 229 aa18.53■□□□□ 0.56
CPSF1-202ENST00000527827 NKAPLQ5M9Q1 402 aa18.53■□□□□ 0.56
CPSF1-202ENST00000527827 RSBN1Q5VWQ0 802 aaPredicted RBP18.53■□□□□ 0.56
CPSF1-202ENST00000527827 ELP2Q6IA86 826 aa18.53■□□□□ 0.56
CPSF1-202ENST00000527827 CNIH3Q8TBE1 160 aa18.53■□□□□ 0.56
CPSF1-202ENST00000527827 PLPPR1Q8TBJ4 325 aa18.53■□□□□ 0.56
CPSF1-202ENST00000527827 RNFT2Q96EX2 444 aa18.53■□□□□ 0.56
CPSF1-202ENST00000527827 NR1H4Q96RI1 486 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms