RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 C10orf35Q96D05 121 aa12.52□□□□□ -0.41
CHMP4A-203ENST00000527154 BORCS8Q96FH0 119 aa12.52□□□□□ -0.41
CHMP4A-203ENST00000527154 S1PR3Q99500 378 aa12.52□□□□□ -0.41
CHMP4A-203ENST00000527154 OSBPL10Q9BXB5 764 aa12.52□□□□□ -0.41
CHMP4A-203ENST00000527154 OR51J1Q9H342 316 aa12.52□□□□□ -0.41
CHMP4A-203ENST00000527154 SNX5Q9Y5X3 404 aa12.52□□□□□ -0.41
CHMP4A-203ENST00000527154 IGKV1-9A0A0C4DH69 117 aa12.51□□□□□ -0.41
CHMP4A-203ENST00000527154 IGKV1-12A0A0C4DH73 117 aa12.51□□□□□ -0.41
CHMP4A-203ENST00000527154 ATP8B1O43520 1251 aa12.51□□□□□ -0.41
CHMP4A-203ENST00000527154 INMTO95050 263 aa12.51□□□□□ -0.41
CHMP4A-203ENST00000527154 IL1AP01583 271 aa12.51□□□□□ -0.41
CHMP4A-203ENST00000527154 IGKV1D-12P01611 117 aa12.51□□□□□ -0.41
CHMP4A-203ENST00000527154 POU3F4P49335 361 aa12.51□□□□□ -0.41
CHMP4A-203ENST00000527154 ISL1P61371 349 aa12.51□□□□□ -0.41
CHMP4A-203ENST00000527154 CBX1P83916 185 aa12.51□□□□□ -0.41
CHMP4A-203ENST00000527154 GK3PQ14409 553 aa12.51□□□□□ -0.41
CHMP4A-203ENST00000527154 GINS1Q14691 196 aa12.51□□□□□ -0.41
CHMP4A-203ENST00000527154 HSP90B2PQ58FF3 399 aa12.51□□□□□ -0.41
CHMP4A-203ENST00000527154 KRBOX4Q5JUW0 171 aa12.51□□□□□ -0.41
CHMP4A-203ENST00000527154 CCDC54Q8NEL0 328 aa12.51□□□□□ -0.41
CHMP4A-203ENST00000527154 OR10G2Q8NGC3 310 aa12.51□□□□□ -0.41
CHMP4A-203ENST00000527154 OR10A7Q8NGE5 316 aa12.51□□□□□ -0.41
CHMP4A-203ENST00000527154 OR51T1Q8NGJ9 327 aa12.51□□□□□ -0.41
CHMP4A-203ENST00000527154 OR2T10Q8NGZ9 312 aa12.51□□□□□ -0.41
CHMP4A-203ENST00000527154 ELAC2Q9BQ52 826 aaKnown RBP12.51□□□□□ -0.41
CHMP4A-203ENST00000527154 PPIL3Q9H2H8 161 aaKnown RBP12.51□□□□□ -0.41
CHMP4A-203ENST00000527154 MED4Q9NPJ6 270 aa12.51□□□□□ -0.41
CHMP4A-203ENST00000527154 CALYQ9NYX4 217 aa12.51□□□□□ -0.41
CHMP4A-203ENST00000527154 TNCP24821 2201 aa12.5□□□□□ -0.41
CHMP4A-203ENST00000527154 NCBP2LA6PVI3 153 aaKnown RBP12.5□□□□□ -0.41
CHMP4A-203ENST00000527154 H3BN98 237 aa12.5□□□□□ -0.41
CHMP4A-203ENST00000527154 SLC33A1O00400 549 aaPredicted RBP12.5□□□□□ -0.41
CHMP4A-203ENST00000527154 HSD17B6O14756 317 aa12.5□□□□□ -0.41
CHMP4A-203ENST00000527154 HSPA12AO43301 675 aa12.5□□□□□ -0.41
CHMP4A-203ENST00000527154 KDM4BO94953 1096 aa12.5□□□□□ -0.41
CHMP4A-203ENST00000527154 HMGN1P05114 100 aa12.5□□□□□ -0.41
CHMP4A-203ENST00000527154 NFYBP25208 207 aa12.5□□□□□ -0.41
CHMP4A-203ENST00000527154 RBP2P50120 134 aa12.5□□□□□ -0.41
CHMP4A-203ENST00000527154 ZP1P60852 638 aa12.5□□□□□ -0.41
CHMP4A-203ENST00000527154 APOFQ13790 326 aa12.5□□□□□ -0.41
CHMP4A-203ENST00000527154 SRSF7Q16629 238 aaKnown RBP eCLIP12.5□□□□□ -0.41
CHMP4A-203ENST00000527154 FAM53AQ6NSI3 398 aaPredicted RBP12.5□□□□□ -0.41
CHMP4A-203ENST00000527154 ZNF322Q6U7Q0 402 aaPredicted RBP12.5□□□□□ -0.41
CHMP4A-203ENST00000527154 LEAP2Q969E1 77 aa12.5□□□□□ -0.41
CHMP4A-203ENST00000527154 FEVQ99581 238 aa12.5□□□□□ -0.41
CHMP4A-203ENST00000527154 RHOFQ9HBH0 211 aa12.5□□□□□ -0.41
CHMP4A-203ENST00000527154 IDI2-AS1Q9NZ38 188 aa12.5□□□□□ -0.41
CHMP4A-203ENST00000527154 MRM2Q9UI43 246 aaKnown RBP12.5□□□□□ -0.41
CHMP4A-203ENST00000527154 GSTK1Q9Y2Q3 226 aa12.5□□□□□ -0.41
CHMP4A-203ENST00000527154 SAMHD1Q9Y3Z3 626 aaKnown RBP12.5□□□□□ -0.41
CHMP4A-203ENST00000527154 TCRBV5S2A0A599 114 aa12.49□□□□□ -0.41
CHMP4A-203ENST00000527154 IGLV1-51P01701 117 aa12.49□□□□□ -0.41
CHMP4A-203ENST00000527154 OR8U9P0C7N5 309 aa12.49□□□□□ -0.41
CHMP4A-203ENST00000527154 CD1BP29016 333 aa12.49□□□□□ -0.41
CHMP4A-203ENST00000527154 PDZK1IP1Q13113 114 aa12.49□□□□□ -0.41
CHMP4A-203ENST00000527154 GALEQ14376 348 aa12.49□□□□□ -0.41
CHMP4A-203ENST00000527154 CDK5R1Q15078 307 aa12.49□□□□□ -0.41
CHMP4A-203ENST00000527154 OR2T5Q6IEZ7 315 aa12.49□□□□□ -0.41
CHMP4A-203ENST00000527154 CATSPERDQ86XM0 798 aa12.49□□□□□ -0.41
CHMP4A-203ENST00000527154 PGAM4Q8N0Y7 254 aa12.49□□□□□ -0.41
CHMP4A-203ENST00000527154 LINC00311Q8N616 119 aa12.49□□□□□ -0.41
CHMP4A-203ENST00000527154 OR13A1Q8NGR1 328 aa12.49□□□□□ -0.41
CHMP4A-203ENST00000527154 OR2T29Q8NH02 315 aa12.49□□□□□ -0.41
CHMP4A-203ENST00000527154 APOL4Q9BPW4 351 aa12.49□□□□□ -0.41
CHMP4A-203ENST00000527154 TTTY10Q9BZA0 68 aa12.49□□□□□ -0.41
CHMP4A-203ENST00000527154 MAGIXQ9H6Y5 334 aa12.49□□□□□ -0.41
CHMP4A-203ENST00000527154 ZNF446Q9NWS9 450 aa12.49□□□□□ -0.41
CHMP4A-203ENST00000527154 IKZF2Q9UKS7 526 aa12.49□□□□□ -0.41
CHMP4A-203ENST00000527154 MAGEB4O15481 346 aaPredicted RBP12.48□□□□□ -0.41
CHMP4A-203ENST00000527154 IGHV3-7P01780 117 aa12.48□□□□□ -0.41
CHMP4A-203ENST00000527154 GAPDHP04406 335 aaKnown RBP12.48□□□□□ -0.41
CHMP4A-203ENST00000527154 IFNA6P05013 189 aa12.48□□□□□ -0.41
CHMP4A-203ENST00000527154 MRPL3P09001 348 aaKnown RBP12.48□□□□□ -0.41
CHMP4A-203ENST00000527154 CALCBP10092 127 aa12.48□□□□□ -0.41
CHMP4A-203ENST00000527154 SOX6P35712 828 aa12.48□□□□□ -0.41
CHMP4A-203ENST00000527154 ATP1B3P54709 279 aa12.48□□□□□ -0.41
CHMP4A-203ENST00000527154 RPS7P62081 194 aaKnown RBP12.48□□□□□ -0.41
CHMP4A-203ENST00000527154 GABPB1Q06547 395 aaPredicted RBP12.48□□□□□ -0.41
CHMP4A-203ENST00000527154 SPATS1Q496A3 300 aa12.48□□□□□ -0.41
CHMP4A-203ENST00000527154 PLEKHG7Q6ZR37 379 aa12.48□□□□□ -0.41
CHMP4A-203ENST00000527154 SGPP2Q8IWX5 399 aa12.48□□□□□ -0.41
CHMP4A-203ENST00000527154 C8orf31Q8N9H6 132 aa12.48□□□□□ -0.41
CHMP4A-203ENST00000527154 ZNF565Q8N9K5 539 aa12.48□□□□□ -0.41
CHMP4A-203ENST00000527154 PP6455Q8WZ26 134 aa12.48□□□□□ -0.41
CHMP4A-203ENST00000527154 THAP7Q9BT49 309 aaPredicted RBP12.48□□□□□ -0.41
CHMP4A-203ENST00000527154 TOLLIPQ9H0E2 274 aa12.48□□□□□ -0.41
CHMP4A-203ENST00000527154 GHITMQ9H3K2 345 aa12.48□□□□□ -0.41
CHMP4A-203ENST00000527154 REEP1Q9H902 201 aa12.48□□□□□ -0.41
CHMP4A-203ENST00000527154 PLEKHA1Q9HB21 404 aa12.48□□□□□ -0.41
CHMP4A-203ENST00000527154 KRT84Q9NSB2 600 aa12.48□□□□□ -0.41
CHMP4A-203ENST00000527154 IGHV3-72A0A0B4J1Y9 119 aa12.47□□□□□ -0.41
CHMP4A-203ENST00000527154 MOSP00540 346 aa12.47□□□□□ -0.41
CHMP4A-203ENST00000527154 CNTFRP26992 372 aa12.47□□□□□ -0.41
CHMP4A-203ENST00000527154 HTR1FP30939 366 aa12.47□□□□□ -0.41
CHMP4A-203ENST00000527154 RAB9AP51151 201 aa12.47□□□□□ -0.41
CHMP4A-203ENST00000527154 SLURP1P55000 103 aa12.47□□□□□ -0.41
CHMP4A-203ENST00000527154 SNU13P55769 128 aaKnown RBP12.47□□□□□ -0.41
CHMP4A-203ENST00000527154 CXCR4P61073 352 aa12.47□□□□□ -0.41
CHMP4A-203ENST00000527154 ACTR3P61158 418 aa12.47□□□□□ -0.41
CHMP4A-203ENST00000527154 ATXN7L3Q14CW9 347 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms