RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 TSPAN14Q8NG11 270 aa10.2□□□□□ -0.78
SMCO4-202ENST00000525141 OR4F5Q8NH21 305 aa10.2□□□□□ -0.78
SMCO4-202ENST00000525141 PIFOQ8TCI5 191 aa10.2□□□□□ -0.78
SMCO4-202ENST00000525141 WFDC12Q8WWY7 111 aa10.2□□□□□ -0.78
SMCO4-202ENST00000525141 MRPS24Q96EL2 167 aaKnown RBP10.2□□□□□ -0.78
SMCO4-202ENST00000525141 FAM192AQ9GZU8 254 aa10.2□□□□□ -0.78
SMCO4-202ENST00000525141 MEGF9Q9H1U4 602 aa10.2□□□□□ -0.78
SMCO4-202ENST00000525141 METTL8Q9H825 291 aaKnown RBP10.2□□□□□ -0.78
SMCO4-202ENST00000525141 EXOSC4Q9NPD3 245 aaKnown RBP10.2□□□□□ -0.78
SMCO4-202ENST00000525141 GHRLQ9UBU3 117 aa10.2□□□□□ -0.78
SMCO4-202ENST00000525141 FAM96BQ9Y3D0 163 aa10.2□□□□□ -0.78
SMCO4-202ENST00000525141 TRAV1-2A0A0B4J238 106 aa10.19□□□□□ -0.78
SMCO4-202ENST00000525141 A0A1W2PQ09 198 aa10.19□□□□□ -0.78
SMCO4-202ENST00000525141 TMEM82A0PJX8 343 aa10.19□□□□□ -0.78
SMCO4-202ENST00000525141 MEIOCA2RUB1 952 aa10.19□□□□□ -0.78
SMCO4-202ENST00000525141 TRIM64CA6NLI5 447 aa10.19□□□□□ -0.78
SMCO4-202ENST00000525141 DEGS1O15121 323 aa10.19□□□□□ -0.78
SMCO4-202ENST00000525141 CLPXO76031 633 aa10.19□□□□□ -0.78
SMCO4-202ENST00000525141 HTR3BO95264 441 aa10.19□□□□□ -0.78
SMCO4-202ENST00000525141 OR2H2O95918 312 aa10.19□□□□□ -0.78
SMCO4-202ENST00000525141 CALCBP10092 127 aa10.19□□□□□ -0.78
SMCO4-202ENST00000525141 GTF2F2P13984 249 aa10.19□□□□□ -0.78
SMCO4-202ENST00000525141 CCL3L1P16619 93 aa10.19□□□□□ -0.78
SMCO4-202ENST00000525141 FGF9P31371 208 aaPredicted RBP10.19□□□□□ -0.78
SMCO4-202ENST00000525141 PSMD7P51665 324 aa10.19□□□□□ -0.78
SMCO4-202ENST00000525141 GUCA2AQ02747 115 aa10.19□□□□□ -0.78
SMCO4-202ENST00000525141 IL13RA2Q14627 380 aa10.19□□□□□ -0.78
SMCO4-202ENST00000525141 GDPD3Q7L5L3 318 aa10.19□□□□□ -0.78
SMCO4-202ENST00000525141 FAM185AQ8N0U4 392 aa10.19□□□□□ -0.78
SMCO4-202ENST00000525141 ASCC1Q8N9N2 400 aaKnown RBP10.19□□□□□ -0.78
SMCO4-202ENST00000525141 OR4D6Q8NGJ1 314 aa10.19□□□□□ -0.78
SMCO4-202ENST00000525141 PPP1R35Q8TAP8 253 aa10.19□□□□□ -0.78
SMCO4-202ENST00000525141 MUL1Q969V5 352 aa10.19□□□□□ -0.78
SMCO4-202ENST00000525141 NR1H4Q96RI1 486 aaPredicted RBP10.19□□□□□ -0.78
SMCO4-202ENST00000525141 NKX3-1Q99801 234 aaPredicted RBP10.19□□□□□ -0.78
SMCO4-202ENST00000525141 DPAGT1Q9H3H5 408 aa10.19□□□□□ -0.78
SMCO4-202ENST00000525141 C16orf95Q9H693 158 aa10.19□□□□□ -0.78
SMCO4-202ENST00000525141 MRPS28Q9Y2Q9 187 aaKnown RBP10.19□□□□□ -0.78
SMCO4-202ENST00000525141 A0A0G2JK05 382 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 A0A1W2PPH5 198 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 MGST3O14880 152 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 PSPNO60542 156 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 TSPAN9O75954 239 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 CSN2P05814 226 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 FBP1P09467 338 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 UBBP0CG47 229 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 GABRR1P24046 479 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 CALRP27797 417 aaKnown RBP10.18□□□□□ -0.78
SMCO4-202ENST00000525141 ERP29P30040 261 aaKnown RBP10.18□□□□□ -0.78
SMCO4-202ENST00000525141 RANBP1P43487 201 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 SNU13P55769 128 aaKnown RBP10.18□□□□□ -0.78
SMCO4-202ENST00000525141 RPL15P61313 204 aaKnown RBP10.18□□□□□ -0.78
SMCO4-202ENST00000525141 RPL31P62899 125 aaKnown RBP10.18□□□□□ -0.78
SMCO4-202ENST00000525141 MEF2CQ06413 473 aaPredicted RBP10.18□□□□□ -0.78
SMCO4-202ENST00000525141 ZNF273Q14593 569 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 NEDD8Q15843 81 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 SLC22A6Q4U2R8 563 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 LDLRAD2Q5SZI1 272 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 AWAT2Q6E213 333 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 SLC35E4Q6ICL7 350 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 GLIPR1L1Q6UWM5 242 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 TREML4Q6UXN2 200 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 LINC00596Q86U02 117 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 BEND2Q8NDZ0 799 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 OR10K1Q8NGX5 313 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 IFT22Q9H7X7 185 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 VCX3AQ9NNX9 186 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 ST3GAL6Q9Y274 331 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 RNF114Q9Y508 228 aa10.18□□□□□ -0.78
SMCO4-202ENST00000525141 FUOMA2VDF0 154 aa10.17□□□□□ -0.78
SMCO4-202ENST00000525141 FAM90A8PA6NJQ4 464 aa10.17□□□□□ -0.78
SMCO4-202ENST00000525141 C17orf98A8MV24 154 aa10.17□□□□□ -0.78
SMCO4-202ENST00000525141 SIRPB1O00241 398 aa10.17□□□□□ -0.78
SMCO4-202ENST00000525141 SLC33A1O00400 549 aaPredicted RBP10.17□□□□□ -0.78
SMCO4-202ENST00000525141 SLC22A1O15245 554 aa10.17□□□□□ -0.78
SMCO4-202ENST00000525141 ZNF44P15621 663 aa10.17□□□□□ -0.78
SMCO4-202ENST00000525141 JUNBP17275 347 aaPredicted RBP10.17□□□□□ -0.78
SMCO4-202ENST00000525141 SERPINA2P20848 420 aa10.17□□□□□ -0.78
SMCO4-202ENST00000525141 HTR2CP28335 458 aa10.17□□□□□ -0.78
SMCO4-202ENST00000525141 OR3A1P47881 315 aa10.17□□□□□ -0.78
SMCO4-202ENST00000525141 RBM11P57052 281 aaKnown RBP10.17□□□□□ -0.78
SMCO4-202ENST00000525141 SCN1BQ07699 218 aa10.17□□□□□ -0.78
SMCO4-202ENST00000525141 GRK1Q15835 563 aa10.17□□□□□ -0.78
SMCO4-202ENST00000525141 MPV17LQ2QL34 196 aa10.17□□□□□ -0.78
SMCO4-202ENST00000525141 MIDNQ504T8 468 aa10.17□□□□□ -0.78
SMCO4-202ENST00000525141 KIAA2026Q5HYC2 2103 aa10.17□□□□□ -0.78
SMCO4-202ENST00000525141 NCR3LG1Q68D85 454 aa10.17□□□□□ -0.78
SMCO4-202ENST00000525141 DYNAPQ8N1N2 210 aa10.17□□□□□ -0.78
SMCO4-202ENST00000525141 OR4S1Q8NGB4 309 aa10.17□□□□□ -0.78
SMCO4-202ENST00000525141 VPREB3Q9UKI3 123 aa10.17□□□□□ -0.78
SMCO4-202ENST00000525141 STUB1Q9UNE7 303 aa10.17□□□□□ -0.78
SMCO4-202ENST00000525141 SSR3Q9UNL2 185 aa10.17□□□□□ -0.78
SMCO4-202ENST00000525141 AK6Q9Y3D8 172 aaKnown RBP10.17□□□□□ -0.78
SMCO4-202ENST00000525141 TRAV24A0A0B4J272 114 aa10.16□□□□□ -0.78
SMCO4-202ENST00000525141 MEX3AA1L020 520 aaKnown RBP10.16□□□□□ -0.78
SMCO4-202ENST00000525141 FAM90A10PA6NDY2 464 aa10.16□□□□□ -0.78
SMCO4-202ENST00000525141 FAM90A18PA6NE21 464 aa10.16□□□□□ -0.78
SMCO4-202ENST00000525141 FAM90A16PA6NEW6 464 aa10.16□□□□□ -0.78
SMCO4-202ENST00000525141 FAM90A20PA6NIJ5 464 aa10.16□□□□□ -0.78
SMCO4-202ENST00000525141 FAM90A7PA6NKC0 464 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms