RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 KNL1Q8NG31 2342 aa2.24□□□□□ -2.05
SKP1-212ENST00000523966 NLRC5Q86WI3 1866 aa2.24□□□□□ -2.05
SKP1-212ENST00000523966 LTBP2Q14767 1821 aa2.24□□□□□ -2.05
SKP1-212ENST00000523966 PATJQ8NI35 1801 aa2.24□□□□□ -2.05
SKP1-212ENST00000523966 DOCK6Q96HP0 2047 aa2.24□□□□□ -2.05
SKP1-212ENST00000523966 GOLGA4Q13439 2230 aaKnown RBP2.23□□□□□ -2.05
SKP1-212ENST00000523966 TRIOBPQ9H2D6 2365 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 NUMA1Q14980 2115 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 PLXNA3P51805 1871 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 DENND4AQ7Z401 1863 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 COL4A6Q14031 1691 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 LOC285095A0A1B0GVY8 99 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 GMNCA6NCL1 334 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 FAM159BA6NKW6 160 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 CENPBD1B2RD01 187 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 SCELO95171 688 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 FAM107AO95990 144 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 CATP04040 527 aaKnown RBP2.23□□□□□ -2.05
SKP1-212ENST00000523966 SHBGP04278 402 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 RPN2P04844 631 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 RHOCP08134 193 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 GABRG2P18507 467 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 LOXP28300 417 aaPredicted RBP2.23□□□□□ -2.05
SKP1-212ENST00000523966 ALDH3A1P30838 453 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 CD70P32970 193 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 OR2B8PP59922 312 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 RPL26P61254 145 aaKnown RBP2.23□□□□□ -2.05
SKP1-212ENST00000523966 AP1S1P61966 158 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 RPS24P62847 133 aaKnown RBP2.23□□□□□ -2.05
SKP1-212ENST00000523966 TMED2Q15363 201 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 SLC25A35Q3KQZ1 300 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 TTMPQ5BVD1 217 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 HHATQ5VTY9 493 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 PDPK2PQ6A1A2 396 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 KRTAP5-2Q701N4 177 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 NDUFAF7Q7L592 441 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 MRPL21Q7Z2W9 205 aaKnown RBP2.23□□□□□ -2.05
SKP1-212ENST00000523966 LYPD1Q8N2G4 141 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 ZNF645Q8N7E2 425 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 TMEM104Q8NE00 496 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 OR5T1Q8NG75 326 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 ENKURQ8TC29 256 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 DDI1Q8WTU0 396 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 CHMP6Q96FZ7 201 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 RDH12Q96NR8 316 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 OR4K3Q96R72 315 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 SELENOSQ9BQE4 189 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 AGMATQ9BSE5 352 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 SFXN3Q9BWM7 321 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 NSRP1Q9H0G5 558 aaKnown RBP2.23□□□□□ -2.05
SKP1-212ENST00000523966 TRABDQ9H4I3 376 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 ARMC7Q9H6L4 198 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 CRLF2Q9HC73 371 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 TREX1Q9NSU2 369 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 EURLQ9NYK6 297 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 RPL26L1Q9UNX3 145 aaKnown RBP2.23□□□□□ -2.05
SKP1-212ENST00000523966 SNX10Q9Y5X0 201 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 S4R3C0 116 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 BRCA2P51587 3418 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 CHD5Q8TDI0 1954 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 ANAPC1Q9H1A4 1944 aa2.23□□□□□ -2.05
SKP1-212ENST00000523966 MYOFQ9NZM1 2061 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 NCOR1O75376 2440 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 MYO16Q9Y6X6 1858 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 MKI67P46013 3256 aaKnown RBP2.22□□□□□ -2.05
SKP1-212ENST00000523966 COL4A4P53420 1690 aaPredicted RBP2.22□□□□□ -2.05
SKP1-212ENST00000523966 IGKV1D-17A0A075B6S4 117 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 IGHV3-72A0A0B4J1Y9 119 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 IGHV1-3A0A0C4DH29 117 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 A0A0D9SEW6 157 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 GOLGA6L7A0A1B0GV03 622 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 SLC22A20A6NK97 555 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 H3BN98 237 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 M0R1X1 148 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 COPEO14579 308 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 BIRC5O15392 142 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 CCL16O15467 120 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 CDRT1O95170 752 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 IGKV1-17P01599 117 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 HLA-DQB2P05538 268 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 DCNP07585 359 aaKnown RBP2.22□□□□□ -2.05
SKP1-212ENST00000523966 TACSTD2P09758 323 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 NEFHP12036 1026 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 PRKACAP17612 351 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 CRABP2P29373 138 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 BMI1P35226 326 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 RHOAP61586 193 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 NAA20P61599 178 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 GNGT1P63211 74 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 LCN2P80188 198 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 ZNF616Q08AN1 781 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 FUT5Q11128 374 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 POU6F1Q14863 301 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 PDGFRLQ15198 375 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 TAF1AQ15573 450 aaPredicted RBP2.22□□□□□ -2.05
SKP1-212ENST00000523966 TSC22D1Q15714 1073 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 CCDC153Q494R4 210 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 DNLZQ5SXM8 178 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 FAM222AQ5U5X8 452 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 BBS7Q8IWZ6 715 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms