RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 MRGPRDQ8TDS7 321 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 ASB17Q8WXJ9 295 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 ARPC1AQ92747 370 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 CORO2AQ92828 525 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 DLX4Q92988 240 aaPredicted RBP9.03□□□□□ -0.96
SDCBP-211ENST00000523441 ST6GALNAC6Q969X2 333 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 NR1H4Q96RI1 486 aaPredicted RBP9.03□□□□□ -0.96
SDCBP-211ENST00000523441 CNN2Q99439 309 aaKnown RBP9.03□□□□□ -0.96
SDCBP-211ENST00000523441 FAM110AQ9BQ89 295 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 RSRP1Q9BUV0 290 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 CCDC134Q9H6E4 229 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 MOB1AQ9H8S9 216 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 LIN7CQ9NUP9 197 aaKnown RBP9.03□□□□□ -0.96
SDCBP-211ENST00000523441 CALYQ9NYX4 217 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 TVP23BQ9NYZ1 205 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 IDI2-AS1Q9NZ38 188 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 MYRFQ9Y2G1 1151 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 SNX5Q9Y5X3 404 aa9.03□□□□□ -0.96
SDCBP-211ENST00000523441 IGHV1-3A0A0C4DH29 117 aa9.02□□□□□ -0.97
SDCBP-211ENST00000523441 KBTBD11-OT1A0A1B0GTJ5 212 aa9.02□□□□□ -0.97
SDCBP-211ENST00000523441 ZNF736B4DX44 427 aaPredicted RBP9.02□□□□□ -0.97
SDCBP-211ENST00000523441 M0R129 80 aa9.02□□□□□ -0.97
SDCBP-211ENST00000523441 MPZL2O60487 215 aa9.02□□□□□ -0.97
SDCBP-211ENST00000523441 HMGN1P05114 100 aa9.02□□□□□ -0.97
SDCBP-211ENST00000523441 RBP2P50120 134 aa9.02□□□□□ -0.97
SDCBP-211ENST00000523441 CDC42P60953 191 aa9.02□□□□□ -0.97
SDCBP-211ENST00000523441 ZNF146Q15072 292 aa9.02□□□□□ -0.97
SDCBP-211ENST00000523441 SPIN3Q5JUX0 258 aa9.02□□□□□ -0.97
SDCBP-211ENST00000523441 TGIF2LXQ8IUE1 241 aa9.02□□□□□ -0.97
SDCBP-211ENST00000523441 SLC35F2Q8IXU6 374 aa9.02□□□□□ -0.97
SDCBP-211ENST00000523441 OR8H3Q8N146 312 aa9.02□□□□□ -0.97
SDCBP-211ENST00000523441 OR6Q1Q8NGQ2 317 aa9.02□□□□□ -0.97
SDCBP-211ENST00000523441 OR2T10Q8NGZ9 312 aa9.02□□□□□ -0.97
SDCBP-211ENST00000523441 HAVCR2Q8TDQ0 301 aa9.02□□□□□ -0.97
SDCBP-211ENST00000523441 CASTOR1Q8WTX7 329 aa9.02□□□□□ -0.97
SDCBP-211ENST00000523441 HMG20AQ9NP66 347 aa9.02□□□□□ -0.97
SDCBP-211ENST00000523441 KIAA1456Q9P272 454 aa9.02□□□□□ -0.97
SDCBP-211ENST00000523441 KIF25Q9UIL4 384 aa9.02□□□□□ -0.97
SDCBP-211ENST00000523441 TMEM14AQ9Y6G1 99 aa9.02□□□□□ -0.97
SDCBP-211ENST00000523441 FRAS1Q86XX4 4008 aa9.01□□□□□ -0.97
SDCBP-211ENST00000523441 A0A087X0M5 115 aa9.01□□□□□ -0.97
SDCBP-211ENST00000523441 A0A1B0GX30 115 aa9.01□□□□□ -0.97
SDCBP-211ENST00000523441 ZNF670-ZNF695F2Z2N8 137 aa9.01□□□□□ -0.97
SDCBP-211ENST00000523441 G3V318 75 aa9.01□□□□□ -0.97
SDCBP-211ENST00000523441 SLC33A1O00400 549 aaPredicted RBP9.01□□□□□ -0.97
SDCBP-211ENST00000523441 DEGS1O15121 323 aa9.01□□□□□ -0.97
SDCBP-211ENST00000523441 E2F6O75461 281 aa9.01□□□□□ -0.97
SDCBP-211ENST00000523441 IGHG4P01861 327 aa9.01□□□□□ -0.97
SDCBP-211ENST00000523441 IFNA6P05013 189 aa9.01□□□□□ -0.97
SDCBP-211ENST00000523441 ARSBP15848 533 aa9.01□□□□□ -0.97
SDCBP-211ENST00000523441 PSMB8P28062 276 aa9.01□□□□□ -0.97
SDCBP-211ENST00000523441 SOX6P35712 828 aa9.01□□□□□ -0.97
SDCBP-211ENST00000523441 VEGFCP49767 419 aa9.01□□□□□ -0.97
SDCBP-211ENST00000523441 ACTR3P61158 418 aa9.01□□□□□ -0.97
SDCBP-211ENST00000523441 HDXQ7Z353 690 aa9.01□□□□□ -0.97
SDCBP-211ENST00000523441 SGPP2Q8IWX5 399 aa9.01□□□□□ -0.97
SDCBP-211ENST00000523441 HS3ST5Q8IZT8 346 aa9.01□□□□□ -0.97
SDCBP-211ENST00000523441 RDH10Q8IZV5 341 aa9.01□□□□□ -0.97
SDCBP-211ENST00000523441 S1PR3Q99500 378 aa9.01□□□□□ -0.97
SDCBP-211ENST00000523441 SPATA25Q9BR10 227 aa9.01□□□□□ -0.97
SDCBP-211ENST00000523441 CHST5Q9GZS9 411 aa9.01□□□□□ -0.97
SDCBP-211ENST00000523441 GHITMQ9H3K2 345 aa9.01□□□□□ -0.97
SDCBP-211ENST00000523441 OR6C3Q9NZP0 311 aa9.01□□□□□ -0.97
SDCBP-211ENST00000523441 MRM2Q9UI43 246 aaKnown RBP9.01□□□□□ -0.97
SDCBP-211ENST00000523441 VSIG4Q9Y279 399 aa9.01□□□□□ -0.97
SDCBP-211ENST00000523441 IGHV3-43A0A0B4J1X8 118 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 IGKV1-12A0A0C4DH73 117 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 I3L521 148 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 GNGT2O14610 69 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 SLC25A17O43808 307 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 APOL3O95236 402 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 LY6G6CO95867 125 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 IGKV1D-12P01611 117 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 GAPDHP04406 335 aaKnown RBP9□□□□□ -0.97
SDCBP-211ENST00000523441 IGHV3-43DP0DP04 118 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 PRKACGP22612 351 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 SSTR5P35346 364 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 F2RL1P55085 397 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 ZP1P60852 638 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 ISL1P61371 349 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 CFHR3Q02985 330 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 SSX6Q7RTT6 188 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 DEFB107AQ8IZN7 70 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 PGAM4Q8N0Y7 254 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 ZNF491Q8N8L2 437 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 RNF152Q8N8N0 203 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 OR4C12Q96R67 309 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 TMED9Q9BVK6 235 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 FAM107BQ9H098 131 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 ZNF556Q9HAH1 456 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 PARP11Q9NR21 331 aa9□□□□□ -0.97
SDCBP-211ENST00000523441 IGHV4OR15-8A0A075B7B6 117 aa8.99□□□□□ -0.97
SDCBP-211ENST00000523441 A0A087WW49 117 aa8.99□□□□□ -0.97
SDCBP-211ENST00000523441 IGKV1-9A0A0C4DH69 117 aa8.99□□□□□ -0.97
SDCBP-211ENST00000523441 LOC107986453A0A1B0GWG9 222 aa8.99□□□□□ -0.97
SDCBP-211ENST00000523441 MAGEA13PA6NCF6 341 aa8.99□□□□□ -0.97
SDCBP-211ENST00000523441 DHRS7CA6NNS2 312 aa8.99□□□□□ -0.97
SDCBP-211ENST00000523441 H0YJX3 145 aa8.99□□□□□ -0.97
SDCBP-211ENST00000523441 CST1P01037 141 aa8.99□□□□□ -0.97
SDCBP-211ENST00000523441 KRT8P05787 483 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms