RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 THBS3P49746 956 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 ZNF85Q03923 595 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 GK2Q14410 553 aaPredicted RBP5.24□□□□□ -1.57
SDCBP-210ENST00000522843 CNPY1Q3B7I2 92 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 TIMM50Q3ZCQ8 353 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 DEGS2Q6QHC5 323 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 ZNF322Q6U7Q0 402 aaPredicted RBP5.24□□□□□ -1.57
SDCBP-210ENST00000522843 TMPRSS11AQ6ZMR5 421 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 SHFQ7M4L6 423 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 LHFPL4Q7Z7J7 247 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 WDR86Q86TI4 376 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 CYB561A3Q8NBI2 242 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 OR1F12Q8NHA8 337 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 ISOC1Q96CN7 298 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 MRPL48Q96GC5 212 aaKnown RBP5.24□□□□□ -1.57
SDCBP-210ENST00000522843 OPALINQ96PE5 141 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 WACQ9BTA9 647 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 GPR61Q9BZJ8 451 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 PRSS22Q9GZN4 317 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 NUAK2Q9H093 628 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 OR51V1Q9H2C8 321 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 METTL8Q9H825 291 aaKnown RBP5.24□□□□□ -1.57
SDCBP-210ENST00000522843 MED20Q9H944 212 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 KCNG2Q9UJ96 466 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 TMEM14AQ9Y6G1 99 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 DNAH11Q96DT5 4516 aa5.24□□□□□ -1.57
SDCBP-210ENST00000522843 TRDV1A0A1B0GX56 115 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 A0A1W2PQL4 384 aaPredicted RBP5.23□□□□□ -1.57
SDCBP-210ENST00000522843 DAPL1A0PJW8 107 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 FAM90A8PA6NJQ4 464 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 LINC01548A6NM66 108 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 H3BMQ9 156 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 H7C1C5 153 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 M0R1W7 72 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 SLC22A1O15245 554 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 RER1O15258 196 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 RAMP3O60896 148 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 ACTL6BO94805 426 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 CLUP10909 449 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 CTLA4P16410 223 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 CD36P16671 472 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 PSMA1P25786 263 aaKnown RBP5.23□□□□□ -1.57
SDCBP-210ENST00000522843 PPIFP30405 207 aaKnown RBP5.23□□□□□ -1.57
SDCBP-210ENST00000522843 DCTDP32321 178 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 ATP6V1E1P36543 226 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 LUMP51884 338 aaPredicted RBP5.23□□□□□ -1.57
SDCBP-210ENST00000522843 TAS2R43P59537 309 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 LCN6P62502 163 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 ACTA2P62736 377 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 ACTG2P63267 376 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 SCRN3Q0VDG4 424 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 TRAM1Q15629 374 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 SSX1Q16384 188 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 DGUOKQ16854 277 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 KRTAP27-1Q3LI81 207 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 KLHL12Q53G59 568 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 GPR107Q5VW38 600 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 NCR3LG1Q68D85 454 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 ZNF626Q68DY1 528 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 DMKNQ6E0U4 476 aaPredicted RBP5.23□□□□□ -1.57
SDCBP-210ENST00000522843 SUMO4Q6EEV6 95 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 DNM1P34Q6PK57 102 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 PLEKHG7Q6ZR37 379 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 LHFPL3Q86UP9 236 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 NAA40Q86UY6 237 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 CLVS1Q8IUQ0 354 aaPredicted RBP5.23□□□□□ -1.57
SDCBP-210ENST00000522843 CCDC28AQ8IWP9 274 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 MKXQ8IYA7 352 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 C11orf42Q8N5U0 333 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 MS4A15Q8N5U1 240 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 SLC26A10Q8NG04 563 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 OTOSQ8NHW6 89 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 ASB17Q8WXJ9 295 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 PHYHIPQ92561 330 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 RPL36ALQ969Q0 106 aaKnown RBP5.23□□□□□ -1.57
SDCBP-210ENST00000522843 APOBEC3DQ96AK3 386 aaPredicted RBP5.23□□□□□ -1.57
SDCBP-210ENST00000522843 C12orf43Q96C57 262 aaKnown RBP5.23□□□□□ -1.57
SDCBP-210ENST00000522843 CNN2Q99439 309 aaKnown RBP5.23□□□□□ -1.57
SDCBP-210ENST00000522843 P2RX4Q99571 388 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 SYT4Q9H2B2 425 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 ELL3Q9HB65 397 aaPredicted RBP5.23□□□□□ -1.57
SDCBP-210ENST00000522843 RPRD1BQ9NQG5 326 aaKnown RBP5.23□□□□□ -1.57
SDCBP-210ENST00000522843 MRPL22Q9NWU5 206 aaKnown RBP5.23□□□□□ -1.57
SDCBP-210ENST00000522843 NDUFB11Q9NX14 153 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 PTTG2Q9NZH5 202 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 A3GALT2U3KPV4 340 aa5.23□□□□□ -1.57
SDCBP-210ENST00000522843 H0YIZ8 118 aa5.22□□□□□ -1.57
SDCBP-210ENST00000522843 ZNF593O00488 134 aaPredicted RBP5.22□□□□□ -1.57
SDCBP-210ENST00000522843 MYL12BO14950 172 aa5.22□□□□□ -1.57
SDCBP-210ENST00000522843 NDUFB3O43676 98 aa5.22□□□□□ -1.57
SDCBP-210ENST00000522843 SLC16A7O60669 478 aa5.22□□□□□ -1.57
SDCBP-210ENST00000522843 ZNF254O75437 659 aa5.22□□□□□ -1.57
SDCBP-210ENST00000522843 SC5DO75845 299 aa5.22□□□□□ -1.57
SDCBP-210ENST00000522843 NXPH3O95157 252 aa5.22□□□□□ -1.57
SDCBP-210ENST00000522843 GYPBP06028 91 aa5.22□□□□□ -1.57
SDCBP-210ENST00000522843 IL6RP08887 468 aaPredicted RBP5.22□□□□□ -1.57
SDCBP-210ENST00000522843 PSMB9P28065 219 aa5.22□□□□□ -1.57
SDCBP-210ENST00000522843 CCR9P51686 369 aa5.22□□□□□ -1.57
SDCBP-210ENST00000522843 LSM6P62312 80 aaKnown RBP5.22□□□□□ -1.57
SDCBP-210ENST00000522843 HIST1H3AP68431 136 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms