RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 CAV1Q03135 178 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 ZNF117Q03924 483 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 SELENBP1Q13228 472 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 C1DQ13901 141 aaKnown RBP2.32□□□□□ -2.04
HDAC2-208ENST00000520746 OXA1LQ15070 435 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 ATP6AP1Q15904 470 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 TRMT5Q32P41 509 aaKnown RBP2.32□□□□□ -2.04
HDAC2-208ENST00000520746 ALKBH6Q3KRA9 238 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 HSP90B2PQ58FF3 399 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 DMRTC1Q5HYR2 192 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 AVPI1Q5T686 147 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 ATAD3BQ5T9A4 648 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 C3orf33Q6P1S2 294 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 C6orf89Q6UWU4 347 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 PGAP1Q75T13 922 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 EIF3MQ7L2H7 374 aaKnown RBP2.32□□□□□ -2.04
HDAC2-208ENST00000520746 ZNF429Q86V71 674 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 SIGLECL1Q8N7X8 197 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 WDR31Q8NA23 367 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 OR5W2Q8NH69 310 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 CLDND2Q8NHS1 167 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 CLHC1Q8NHS4 586 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 DCAKDQ8WVC6 231 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 RAB1CQ92928 201 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 EMG1Q92979 244 aaKnown RBP2.32□□□□□ -2.04
HDAC2-208ENST00000520746 CIDECQ96AQ7 238 aaPredicted RBP2.32□□□□□ -2.04
HDAC2-208ENST00000520746 DDIT4LQ96D03 193 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 TIMD4Q96H15 378 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 PKNOX2Q96KN3 472 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 TSSK3Q96PN8 268 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 SLC38A2Q96QD8 506 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 OR2M2Q96R28 347 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 RNF2Q99496 336 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 MRPL57Q9BQC6 102 aaKnown RBP2.32□□□□□ -2.04
HDAC2-208ENST00000520746 CHRDL1Q9BU40 450 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 TAPBPLQ9BX59 468 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 SHCBP1LQ9BZQ2 653 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 OR11A1Q9GZK7 315 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 RNF167Q9H6Y7 350 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 NTN4Q9HB63 628 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 CACYBPQ9HB71 228 aaKnown RBP2.32□□□□□ -2.04
HDAC2-208ENST00000520746 MED29Q9NX70 200 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 UBAP1Q9NZ09 502 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 EXTL2Q9UBQ6 330 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 NUFIP1Q9UHK0 495 aaKnown RBP2.32□□□□□ -2.04
HDAC2-208ENST00000520746 SNX12Q9UMY4 172 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 STK38LQ9Y2H1 464 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 NCKAP5O14513 1909 aa2.32□□□□□ -2.04
HDAC2-208ENST00000520746 PKD1L1Q8TDX9 2849 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 TMED7-TICAM2A0A0A6YYA0 188 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 IGHV1-18A0A0C4DH31 117 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 A0A0G2JLM5 398 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 A0A0G2JMP0 313 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 A0A0X1KG70 313 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 A0A1W2PQD3 144 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 A8MT66 165 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 KRTAP4-16G5E9R7 235 aaPredicted RBP2.31□□□□□ -2.04
HDAC2-208ENST00000520746 M0R233 179 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 SCAMP2O15127 329 aaKnown RBP2.31□□□□□ -2.04
HDAC2-208ENST00000520746 EIF1BO60739 113 aaKnown RBP2.31□□□□□ -2.04
HDAC2-208ENST00000520746 SCGNO76038 276 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 H6PDO95479 791 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 MOSP00540 346 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 HMGN2P05204 90 aaKnown RBP2.31□□□□□ -2.04
HDAC2-208ENST00000520746 TACSTD2P09758 323 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 LINC00032P0C843 101 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 ZNF44P15621 663 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 ZNF32P17041 273 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 NCF2P19878 526 aaPredicted RBP2.31□□□□□ -2.04
HDAC2-208ENST00000520746 FKBP2P26885 142 aaKnown RBP2.31□□□□□ -2.04
HDAC2-208ENST00000520746 GTF2E2P29084 291 aaKnown RBP2.31□□□□□ -2.04
HDAC2-208ENST00000520746 DDOSTP39656 456 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 IDH2P48735 452 aaKnown RBP2.31□□□□□ -2.04
HDAC2-208ENST00000520746 PPOXP50336 477 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 SERPINB9P50453 376 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 EFNB2P52799 333 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 DLX1P56177 255 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 COPZ1P61923 177 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 UBA52P62987 128 aaKnown RBP2.31□□□□□ -2.04
HDAC2-208ENST00000520746 CCL8P80075 99 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 LCN2P80188 198 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 HPCAP84074 193 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 NAB1Q13506 487 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 OR7A5Q15622 319 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 DUSP7Q16829 419 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 PDZK1Q5T2W1 519 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 TSPO2Q5TGU0 170 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 AGBL2Q5U5Z8 902 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 GPR157Q5UAW9 335 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 CARD17Q5XLA6 110 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 FAM71E1Q6IPT2 247 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 HMGN2P46Q86SG4 172 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 LRRC8AQ8IWT6 810 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 RIBC1Q8N443 379 aaPredicted RBP2.31□□□□□ -2.04
HDAC2-208ENST00000520746 C17orf78Q8N4C9 275 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 OR4M2Q8NGB6 313 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 OR52H1Q8NGJ2 320 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 SRSF12Q8WXF0 261 aaKnown RBP2.31□□□□□ -2.04
HDAC2-208ENST00000520746 IFT81Q8WYA0 676 aa2.31□□□□□ -2.04
HDAC2-208ENST00000520746 ZNF75CPQ92670 426 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms