RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 PDCD6O75340 191 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 CA2P00918 260 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 APOA1P02647 267 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 PSKH1P11801 424 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 CRABP2P29373 138 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 KRTAP12-3P60328 96 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 HBG1P69891 147 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 HBG2P69892 147 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 TPBGQ13641 420 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 CASP8Q14790 479 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 TNXAQ16473 311 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 CEACAM21Q3KPI0 293 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 LYPD6Q86Y78 171 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 TRIML2Q8N7C3 387 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 FER1L6-AS1Q8NA97 138 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 MUC7Q8TAX7 377 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 DTD1Q8TEA8 209 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 TMEM239Q8WW34 195 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 OR5P3Q8WZ94 311 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 GTF2H4Q92759 462 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 LRRC39Q96DD0 335 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 ZMYND19Q96E35 227 aaPredicted RBP1.31□□□□□ -2.2
SKP1-203ENST00000517625 FMC1Q96HJ9 113 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 STACQ99469 402 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 OR2D2Q9H210 308 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 POMKQ9H5K3 350 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 XKR8Q9H6D3 395 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 CYB5R1Q9UHQ9 305 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 MUC2Q02817 5179 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 ZSWIM8A7E2V4 1837 aa1.31□□□□□ -2.2
SKP1-203ENST00000517625 VWFP04275 2813 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 THADAQ6YHU6 1953 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 SDK2Q58EX2 2172 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 A0A1W2PNM2 257 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 RAB19A4D1S5 217 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 OR5H14A6NHG9 310 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 M0QXV9 152 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 CDIPTO14735 213 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 CRXO43186 299 aaPredicted RBP1.3□□□□□ -2.2
SKP1-203ENST00000517625 SOX14O95416 240 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 GUSBP08236 651 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 CGB3P0DN86 165 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 CGB7P0DN87 165 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 PYCR1P32322 319 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 UGT2B10P36537 528 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 CBX5P45973 191 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 KCNJ3P48549 501 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 KRTAP12-4P60329 112 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 TRIP13Q15645 432 aaPredicted RBP1.3□□□□□ -2.2
SKP1-203ENST00000517625 FAM162BQ5T6X4 162 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 NXNL2Q5VZ03 156 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 KRTAP5-7Q6L8G8 165 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 MRPL52Q86TS9 123 aaKnown RBP1.3□□□□□ -2.2
SKP1-203ENST00000517625 ZIC4Q8N9L1 334 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 OR8K1Q8NGG5 319 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 CLHC1Q8NHS4 586 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 ZNF75CPQ92670 426 aaPredicted RBP1.3□□□□□ -2.2
SKP1-203ENST00000517625 CLDN23Q96B33 292 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 FXYD5Q96DB9 178 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 C19orf60Q96EN9 201 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 ZNF396Q96N95 335 aaPredicted RBP1.3□□□□□ -2.2
SKP1-203ENST00000517625 NAP1L5Q96NT1 182 aaPredicted RBP1.3□□□□□ -2.2
SKP1-203ENST00000517625 BEX2Q9BXY8 128 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 MFSD1Q9H3U5 465 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 HAUS4Q9H6D7 363 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 RBMX2Q9Y388 322 aaKnown RBP1.3□□□□□ -2.2
SKP1-203ENST00000517625 LOXHD1Q8IVV2 1947 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 C2orf16Q68DN1 1984 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 ATRNO75882 1429 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 MYO18BQ8IUG5 2567 aa1.3□□□□□ -2.2
SKP1-203ENST00000517625 IGHV3OR15-7A0A075B7D8 119 aa1.29□□□□□ -2.2
SKP1-203ENST00000517625 A0A1W2PRG6 482 aa1.29□□□□□ -2.2
SKP1-203ENST00000517625 FAM183AA6NL82 134 aa1.29□□□□□ -2.2
SKP1-203ENST00000517625 FABP7O15540 132 aa1.29□□□□□ -2.2
SKP1-203ENST00000517625 DENRO43583 198 aaKnown RBP1.29□□□□□ -2.2
SKP1-203ENST00000517625 ZNF73O43830 326 aaPredicted RBP1.29□□□□□ -2.2
SKP1-203ENST00000517625 SH2D1AO60880 128 aa1.29□□□□□ -2.2
SKP1-203ENST00000517625 CTSGP08311 255 aa1.29□□□□□ -2.2
SKP1-203ENST00000517625 CCL2P13500 99 aa1.29□□□□□ -2.2
SKP1-203ENST00000517625 TSPOP30536 169 aa1.29□□□□□ -2.2
SKP1-203ENST00000517625 PLTPP55058 493 aa1.29□□□□□ -2.2
SKP1-203ENST00000517625 CD164Q04900 197 aa1.29□□□□□ -2.2
SKP1-203ENST00000517625 PRDX1Q06830 199 aaKnown RBP1.29□□□□□ -2.2
SKP1-203ENST00000517625 TRAM1Q15629 374 aa1.29□□□□□ -2.2
SKP1-203ENST00000517625 BSXQ3C1V8 233 aa1.29□□□□□ -2.2
SKP1-203ENST00000517625 SPIN4Q56A73 249 aa1.29□□□□□ -2.2
SKP1-203ENST00000517625 FBXO48Q5FWF7 155 aa1.29□□□□□ -2.2
SKP1-203ENST00000517625 Q6ZT83 130 aa1.29□□□□□ -2.2
SKP1-203ENST00000517625 FAM183BPQ6ZVS7 135 aa1.29□□□□□ -2.2
SKP1-203ENST00000517625 C10orf107Q8IVU9 208 aa1.29□□□□□ -2.2
SKP1-203ENST00000517625 OR2Y1Q8NGV0 311 aa1.29□□□□□ -2.2
SKP1-203ENST00000517625 C20orf166-AS1Q96NR2 134 aa1.29□□□□□ -2.2
SKP1-203ENST00000517625 B9D2Q9BPU9 175 aa1.29□□□□□ -2.2
SKP1-203ENST00000517625 HINT2Q9BX68 163 aa1.29□□□□□ -2.2
SKP1-203ENST00000517625 ZNF436Q9C0F3 470 aaPredicted RBP1.29□□□□□ -2.2
SKP1-203ENST00000517625 TMBIM4Q9HC24 238 aa1.29□□□□□ -2.2
SKP1-203ENST00000517625 U3KQK5 164 aa1.29□□□□□ -2.2
SKP1-203ENST00000517625 USP42Q9H9J4 1324 aaKnown RBP1.29□□□□□ -2.2
SKP1-203ENST00000517625 BRD4O60885 1362 aaPredicted RBP1.29□□□□□ -2.2
SKP1-203ENST00000517625 SETD1AO15047 1707 aaKnown RBP1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms