RNA–Protein interactions for RNA: ENST00000516884.1

SNORA40.15-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 107 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.15-201ENST00000516884 RILPQ96NA2 401 aa-0.65□□□□□ -2.51
SNORA40.15-201ENST00000516884 QKIQ96PU8 341 aaKnown RBP eCLIP-0.65□□□□□ -2.51
SNORA40.15-201ENST00000516884 METTL26Q96S19 204 aa-0.65□□□□□ -2.51
SNORA40.15-201ENST00000516884 SHCBP1LQ9BZQ2 653 aa-0.65□□□□□ -2.51
SNORA40.15-201ENST00000516884 YLPM1P49750 1951 aaKnown RBP-0.65□□□□□ -2.51
SNORA40.15-201ENST00000516884 PTPRJQ12913 1337 aa-0.65□□□□□ -2.51
SNORA40.15-201ENST00000516884 IGKV2D-29A0A075B6S2 120 aaPredicted RBP-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 DHRS12A0PJE2 317 aa-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 UPK2O00526 184 aa-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 DENRO43583 198 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 NPPAP01160 153 aa-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 DESP17661 470 aa-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 TAC1P20366 129 aa-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 GPR176Q14439 515 aa-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 CDK5R1Q15078 307 aa-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 GALNT10Q86SR1 603 aa-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 C8orf31Q8N9H6 132 aa-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 BBOF1Q8ND07 529 aa-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 FBXO32Q969P5 355 aa-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 REEP6Q96HR9 211 aa-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 OLFM3Q96PB7 478 aa-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 UPK3BQ9BT76 320 aa-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 ADAT1Q9BUB4 502 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 NUP58Q9BVL2 599 aa-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 TM6SF2Q9BZW4 377 aa-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 ALX4Q9H161 411 aaPredicted RBP-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 DEFB129Q9H1M3 183 aa-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 KCNIP2Q9NS61 270 aa-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 ARAP3Q8WWN8 1544 aa-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 CUL9Q8IWT3 2517 aa-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 ZNF638Q14966 1978 aaKnown RBP-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 PCDH15Q96QU1 1955 aa-0.66□□□□□ -2.52
SNORA40.15-201ENST00000516884 OR2AG2A6NM03 316 aa-0.67□□□□□ -2.52
SNORA40.15-201ENST00000516884 SPOPO43791 374 aa-0.67□□□□□ -2.52
SNORA40.15-201ENST00000516884 KRT16P08779 473 aa-0.67□□□□□ -2.52
SNORA40.15-201ENST00000516884 RALBP11234 206 aa-0.67□□□□□ -2.52
SNORA40.15-201ENST00000516884 NQO1P15559 274 aaKnown RBP-0.67□□□□□ -2.52
SNORA40.15-201ENST00000516884 TAGLN2P37802 199 aaKnown RBP-0.67□□□□□ -2.52
SNORA40.15-201ENST00000516884 CIRBPQ14011 172 aaKnown RBP-0.67□□□□□ -2.52
SNORA40.15-201ENST00000516884 SURF2Q15527 256 aaPredicted RBP-0.67□□□□□ -2.52
SNORA40.15-201ENST00000516884 ALKBH6Q3KRA9 238 aa-0.67□□□□□ -2.52
SNORA40.15-201ENST00000516884 PRAMEF20Q5VT98 475 aa-0.67□□□□□ -2.52
SNORA40.15-201ENST00000516884 Q8N2B8 174 aa-0.67□□□□□ -2.52
SNORA40.15-201ENST00000516884 KIF2BQ8N4N8 673 aa-0.67□□□□□ -2.52
SNORA40.15-201ENST00000516884 OR52K1Q8NGK4 314 aa-0.67□□□□□ -2.52
SNORA40.15-201ENST00000516884 NT5CQ8TCD5 201 aa-0.67□□□□□ -2.52
SNORA40.15-201ENST00000516884 CCL17Q92583 94 aa-0.67□□□□□ -2.52
SNORA40.15-201ENST00000516884 C20orf96Q9NUD7 363 aaPredicted RBP-0.67□□□□□ -2.52
SNORA40.15-201ENST00000516884 TBC1D24Q9ULP9 559 aa-0.67□□□□□ -2.52
SNORA40.15-201ENST00000516884 LRP1Q07954 4544 aaKnown RBP-0.67□□□□□ -2.52
SNORA40.15-201ENST00000516884 SLX4Q8IY92 1834 aa-0.67□□□□□ -2.52
SNORA40.15-201ENST00000516884 MYH11P35749 1972 aa-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 TMSB15BA0A087X1C1 80 aa-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 IGKV1-12A0A0C4DH73 117 aa-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 HACD1B0YJ81 288 aa-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 H3BPC8 53 aa-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 RNF113AO15541 343 aaKnown RBP-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 GNRH2O43555 120 aa-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 ZNF737O75373 536 aa-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 PTTG1O95997 202 aa-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 IGKV1D-12P01611 117 aa-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 IGHV3-30-3P0DP02 117 aa-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 S100A2P29034 98 aa-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 AKR1C3P42330 323 aa-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 ATP5IP56385 69 aaPredicted RBP-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 FP248Q71RG6 208 aaPredicted RBP-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 FAM122BQ7Z309 247 aa-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 NANOGNBQ7Z5D8 188 aa-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 SETD3Q86TU7 594 aaPredicted RBP-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 SLC35F6Q8N357 371 aa-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 PQLC3Q8N755 202 aa-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 ASCC1Q8N9N2 400 aaKnown RBP-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 OR6K3Q8NGY3 331 aa-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 GLT1D1Q96MS3 346 aa-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 GSDMAQ96QA5 445 aa-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 C8orf4Q9NR00 106 aa-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 SDHAF3Q9NRP4 125 aa-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 BRWD1Q9NSI6 2320 aa-0.68□□□□□ -2.52
SNORA40.15-201ENST00000516884 ADAMTSL1Q8N6G6 1762 aa-0.69□□□□□ -2.52
SNORA40.15-201ENST00000516884 IGKV1D-42A0A075B6H8 117 aa-0.69□□□□□ -2.52
SNORA40.15-201ENST00000516884 H0Y8G0 127 aa-0.69□□□□□ -2.52
SNORA40.15-201ENST00000516884 ZNF701M0R085 212 aaPredicted RBP-0.69□□□□□ -2.52
SNORA40.15-201ENST00000516884 DFFAO00273 331 aa-0.69□□□□□ -2.52
SNORA40.15-201ENST00000516884 TCF21O43680 179 aa-0.69□□□□□ -2.52
SNORA40.15-201ENST00000516884 GCGP01275 180 aa-0.69□□□□□ -2.52
SNORA40.15-201ENST00000516884 HMOX2P30519 316 aa-0.69□□□□□ -2.52
SNORA40.15-201ENST00000516884 SULT1E1P49888 294 aa-0.69□□□□□ -2.52
SNORA40.15-201ENST00000516884 RPL14P50914 215 aaKnown RBP-0.69□□□□□ -2.52
SNORA40.15-201ENST00000516884 CLDN6P56747 220 aa-0.69□□□□□ -2.52
SNORA40.15-201ENST00000516884 PAFAH1B2P68402 229 aa-0.69□□□□□ -2.52
SNORA40.15-201ENST00000516884 ERHP84090 104 aaKnown RBP-0.69□□□□□ -2.52
SNORA40.15-201ENST00000516884 IDI1Q13907 227 aa-0.69□□□□□ -2.52
SNORA40.15-201ENST00000516884 ANKDD1AQ495B1 522 aa-0.69□□□□□ -2.52
SNORA40.15-201ENST00000516884 FAM27D1Q5T7N8 215 aa-0.69□□□□□ -2.52
SNORA40.15-201ENST00000516884 TMEM220Q6QAJ8 160 aa-0.69□□□□□ -2.52
SNORA40.15-201ENST00000516884 CASC1Q6TDU7 716 aa-0.69□□□□□ -2.52
SNORA40.15-201ENST00000516884 EPGNQ6UW88 154 aa-0.69□□□□□ -2.52
SNORA40.15-201ENST00000516884 CCDC121Q6ZUS5 278 aa-0.69□□□□□ -2.52
SNORA40.15-201ENST00000516884 GABRG1Q8N1C3 465 aa-0.69□□□□□ -2.52
SNORA40.15-201ENST00000516884 Q8N6K4 173 aa-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms