RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 RAB12Q6IQ22 244 aa9.8□□□□□ -0.84
SNF8-215ENST00000515572 IL17RELQ6ZVW7 336 aa9.8□□□□□ -0.84
SNF8-215ENST00000515572 ANKRD13BQ86YJ7 626 aa9.8□□□□□ -0.84
SNF8-215ENST00000515572 PTX4Q96A99 478 aa9.8□□□□□ -0.84
SNF8-215ENST00000515572 RNF167Q9H6Y7 350 aa9.8□□□□□ -0.84
SNF8-215ENST00000515572 METTL8Q9H825 291 aaKnown RBP9.8□□□□□ -0.84
SNF8-215ENST00000515572 LIN7BQ9HAP6 207 aa9.8□□□□□ -0.84
SNF8-215ENST00000515572 RAB22AQ9UL26 194 aa9.8□□□□□ -0.84
SNF8-215ENST00000515572 UBE2J1Q9Y385 318 aaPredicted RBP9.8□□□□□ -0.84
SNF8-215ENST00000515572 LINC00312Q9Y6C7 94 aa9.8□□□□□ -0.84
SNF8-215ENST00000515572 MTORP42345 2549 aa9.8□□□□□ -0.84
SNF8-215ENST00000515572 SONP18583 2426 aaKnown RBP9.8□□□□□ -0.84
SNF8-215ENST00000515572 TRGV10A0A0A0MS01 117 aa9.79□□□□□ -0.84
SNF8-215ENST00000515572 ODAMA1E959 279 aa9.79□□□□□ -0.84
SNF8-215ENST00000515572 LDLRAD4O15165 306 aa9.79□□□□□ -0.84
SNF8-215ENST00000515572 PDCD6O75340 191 aa9.79□□□□□ -0.84
SNF8-215ENST00000515572 FSHBP01225 129 aa9.79□□□□□ -0.84
SNF8-215ENST00000515572 IL1AP01583 271 aa9.79□□□□□ -0.84
SNF8-215ENST00000515572 RAB6AP20340 208 aa9.79□□□□□ -0.84
SNF8-215ENST00000515572 SCAND1P57086 179 aa9.79□□□□□ -0.84
SNF8-215ENST00000515572 LSM3P62310 102 aaKnown RBP9.79□□□□□ -0.84
SNF8-215ENST00000515572 MXD1Q05195 221 aa9.79□□□□□ -0.84
SNF8-215ENST00000515572 GPR107Q5VW38 600 aa9.79□□□□□ -0.84
SNF8-215ENST00000515572 SLC35E4Q6ICL7 350 aa9.79□□□□□ -0.84
SNF8-215ENST00000515572 OR10K2Q6IF99 312 aa9.79□□□□□ -0.84
SNF8-215ENST00000515572 SFXN4Q6P4A7 337 aa9.79□□□□□ -0.84
SNF8-215ENST00000515572 METAP1DQ6UB28 335 aaPredicted RBP9.79□□□□□ -0.84
SNF8-215ENST00000515572 NEK7Q8TDX7 302 aa9.79□□□□□ -0.84
SNF8-215ENST00000515572 CORO2AQ92828 525 aa9.79□□□□□ -0.84
SNF8-215ENST00000515572 COQ2Q96H96 371 aa9.79□□□□□ -0.84
SNF8-215ENST00000515572 ZNF714Q96N38 554 aa9.79□□□□□ -0.84
SNF8-215ENST00000515572 NEDD4LQ96PU5 975 aa9.79□□□□□ -0.84
SNF8-215ENST00000515572 TBX15Q96SF7 602 aa9.79□□□□□ -0.84
SNF8-215ENST00000515572 LPAR5Q9H1C0 372 aa9.79□□□□□ -0.84
SNF8-215ENST00000515572 UNKLQ9H9P5 680 aaKnown RBP9.79□□□□□ -0.84
SNF8-215ENST00000515572 OR6C3Q9NZP0 311 aa9.79□□□□□ -0.84
SNF8-215ENST00000515572 ZNF581Q9P0T4 197 aa9.79□□□□□ -0.84
SNF8-215ENST00000515572 DAPK2Q9UIK4 370 aa9.79□□□□□ -0.84
SNF8-215ENST00000515572 PEX16Q9Y5Y5 336 aa9.79□□□□□ -0.84
SNF8-215ENST00000515572 FN1P02751 2386 aaKnown RBP9.79□□□□□ -0.84
SNF8-215ENST00000515572 TMEM272A0A1B0GTI8 110 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 TMEM30CPA0ZSE6 113 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 SMIM30A4D0T7 59 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 C17orf98A8MV24 154 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 CA11O75493 328 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 GABARAPO95166 117 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 ZNF728P0DKX0 622 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 SLC2A2P11168 524 aaPredicted RBP9.78□□□□□ -0.84
SNF8-215ENST00000515572 PRTN3P24158 256 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 GLIPR1P48060 266 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 BPIFB3P59826 476 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 ZNF273Q14593 569 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 RSBN1Q5VWQ0 802 aaPredicted RBP9.78□□□□□ -0.84
SNF8-215ENST00000515572 NCR3LG1Q68D85 454 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 SIGIRRQ6IA17 410 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 SLC16A12Q6ZSM3 486 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 VMO1Q7Z5L0 202 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 TRAPPC6BQ86SZ2 158 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 BPIFB2Q8N4F0 458 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 FAM89BQ8N5H3 189 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 Q8N7P7 452 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 TPRX1Q8N7U7 411 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 ZNF565Q8N9K5 539 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 OR56B1Q8NGI3 324 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 GAL3ST2Q9H3Q3 398 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 KCNK15Q9H427 330 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 TAS2R3Q9NYW6 316 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 NUP50Q9UKX7 468 aa9.78□□□□□ -0.84
SNF8-215ENST00000515572 MEIKINA0A087WXM9 373 aa9.77□□□□□ -0.85
SNF8-215ENST00000515572 TRAV40A0A0B4J280 105 aa9.77□□□□□ -0.85
SNF8-215ENST00000515572 METTL21EPA6NDL7 271 aa9.77□□□□□ -0.85
SNF8-215ENST00000515572 CLEC2LP0C7M8 214 aa9.77□□□□□ -0.85
SNF8-215ENST00000515572 CCL3L1P16619 93 aa9.77□□□□□ -0.85
SNF8-215ENST00000515572 CHATP28329 748 aa9.77□□□□□ -0.85
SNF8-215ENST00000515572 BLVRBP30043 206 aaPredicted RBP9.77□□□□□ -0.85
SNF8-215ENST00000515572 DLX6P56179 175 aa9.77□□□□□ -0.85
SNF8-215ENST00000515572 ERVFRD-1P60508 538 aa9.77□□□□□ -0.85
SNF8-215ENST00000515572 NCS1P62166 190 aa9.77□□□□□ -0.85
SNF8-215ENST00000515572 GUCA2AQ02747 115 aa9.77□□□□□ -0.85
SNF8-215ENST00000515572 CTF1Q16619 201 aa9.77□□□□□ -0.85
SNF8-215ENST00000515572 KLF17Q5JT82 389 aaPredicted RBP9.77□□□□□ -0.85
SNF8-215ENST00000515572 IDNKQ5T6J7 187 aa9.77□□□□□ -0.85
SNF8-215ENST00000515572 GPR157Q5UAW9 335 aa9.77□□□□□ -0.85
SNF8-215ENST00000515572 TCF23Q7RTU1 214 aa9.77□□□□□ -0.85
SNF8-215ENST00000515572 PLPPR1Q8TBJ4 325 aa9.77□□□□□ -0.85
SNF8-215ENST00000515572 BCL7BQ9BQE9 202 aa9.77□□□□□ -0.85
SNF8-215ENST00000515572 NICN1Q9BSH3 213 aa9.77□□□□□ -0.85
SNF8-215ENST00000515572 ING3Q9NXR8 418 aa9.77□□□□□ -0.85
SNF8-215ENST00000515572 KIF25Q9UIL4 384 aa9.77□□□□□ -0.85
SNF8-215ENST00000515572 HSF4Q9ULV5 492 aa9.77□□□□□ -0.85
SNF8-215ENST00000515572 ETV7Q9Y603 341 aa9.77□□□□□ -0.85
SNF8-215ENST00000515572 ZNF729A6NN14 1252 aaPredicted RBP9.76□□□□□ -0.85
SNF8-215ENST00000515572 EPHA1P21709 976 aa9.76□□□□□ -0.85
SNF8-215ENST00000515572 FPR2P25090 351 aa9.76□□□□□ -0.85
SNF8-215ENST00000515572 TGFBR1P36897 503 aa9.76□□□□□ -0.85
SNF8-215ENST00000515572 RPS19P39019 145 aaKnown RBP9.76□□□□□ -0.85
SNF8-215ENST00000515572 SERPINB10P48595 397 aa9.76□□□□□ -0.85
SNF8-215ENST00000515572 TMBIM6P55061 237 aa9.76□□□□□ -0.85
SNF8-215ENST00000515572 VBP1P61758 197 aa9.76□□□□□ -0.85
SNF8-215ENST00000515572 NKAPLQ5M9Q1 402 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms