RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 ELOBQ15370 118 aa6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 LRRC37A5PQ49AS3 106 aa6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 ZNF684Q5T5D7 378 aa6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 WDR74Q6RFH5 385 aaPredicted RBP6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 SLC35F2Q8IXU6 374 aa6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 GATSQ8NAP1 163 aa6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 OR2T27Q8NH04 317 aa6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 LMX1AQ8TE12 382 aa6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 HAVCR1Q96D42 359 aa6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 GFI1Q99684 422 aa6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 LRFN3Q9BTN0 628 aa6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 VAMP8Q9BV40 100 aa6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 SSBP4Q9BWG4 385 aaPredicted RBP6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 HRASLSQ9HDD0 168 aa6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 AK6Q9Y3D8 172 aaKnown RBP6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 ADAMTS9Q9P2N4 1935 aa6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 TLCD2A6NGC4 264 aa6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 C17orf51A8MQB3 221 aa6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 XKRYO14609 159 aa6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 WISP1O95388 367 aa6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 IGKV3-11P04433 115 aa6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 IL5P05113 134 aa6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 ATF1P18846 271 aa6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 CD27P26842 260 aa6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 CD38P28907 300 aa6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 HINT1P49773 126 aaPredicted RBP6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 ZNF74Q16587 644 aa6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 RPL22L1Q6P5R6 122 aaKnown RBP6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 DND1Q8IYX4 353 aaKnown RBP6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 NXF5Q9H1B4 397 aaKnown RBP6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 ABCA7Q8IZY2 2146 aa6.53□□□□□ -1.36
PDLIM5-219ENST00000514743 TRAV1-2A0A0B4J238 106 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 METTL12A8MUP2 240 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 FAM157AC9JC47 383 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 CD1AP06126 327 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 ASAH2BP0C7U1 165 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 SRFP11831 508 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 PTHLHP12272 177 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 SNCAP37840 140 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 CDKN2AP42771 156 aaKnown RBP6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 CFHR1Q03591 330 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 SPOCK1Q08629 439 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 KLF9Q13886 244 aaPredicted RBP6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 DEFB133Q30KQ1 61 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 AWAT2Q6E213 333 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 MRGPRGQ86SM5 289 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 GKN2Q86XP6 184 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 INO80EQ8NBZ0 244 aaPredicted RBP6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 ZNF721Q8TF20 911 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 THAP4Q8WY91 577 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 DCBLD2Q96PD2 775 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 PDCD1LG2Q9BQ51 273 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 THYN1Q9P016 225 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 FRYLO94915 3013 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 PIN1P1O15428 100 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 DDAH2O95865 285 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 HAND1O96004 215 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 PF4P02776 101 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 CD37P11049 281 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 KITLGP21583 273 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 FBLP22087 321 aaKnown RBP6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 OTX2P32243 289 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 NANOS3P60323 173 aaKnown RBP6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 SIRPAP78324 504 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 GABRA6Q16445 453 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 OTPQ5XKR4 325 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 EID2Q8N6I1 236 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 RNF133Q8WVZ7 376 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 SARAFQ96BY9 339 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 SLC25A18Q9H1K4 315 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 AUNIPQ9H7T9 357 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 ZNF319Q9P2F9 582 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 VPS13AQ96RL7 3174 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 A0A1B0GVT2 93 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 ODAMA1E959 279 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 PRR33A8MZF0 331 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 ZNF217O75362 1048 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 TAF13Q15543 124 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 PRAMEF17Q5VTA0 474 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 C1orf210Q8IVY1 113 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 C17orf78Q8N4C9 275 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 ZNF433Q8N7K0 673 aaPredicted RBP6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 OR52I2Q8NH67 350 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 GPR119Q8TDV5 335 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 Q96M85 177 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 KCNJ16Q9NPI9 418 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 KLHDC2Q9Y2U9 406 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 MEMO1Q9Y316 297 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 RNF115Q9Y4L5 304 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 TNRC6BQ9UPQ9 1833 aaKnown RBP6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 SPAG17Q6Q759 2223 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 RP1P56715 2156 aa6.52□□□□□ -1.37
PDLIM5-219ENST00000514743 SDK1Q7Z5N4 2213 aa6.51□□□□□ -1.37
PDLIM5-219ENST00000514743 ZNF208O43345 1280 aa6.51□□□□□ -1.37
PDLIM5-219ENST00000514743 S1PR2O95136 353 aa6.51□□□□□ -1.37
PDLIM5-219ENST00000514743 GATA3P23771 443 aa6.51□□□□□ -1.37
PDLIM5-219ENST00000514743 PPICP45877 212 aa6.51□□□□□ -1.37
PDLIM5-219ENST00000514743 OR1D4P47884 311 aa6.51□□□□□ -1.37
PDLIM5-219ENST00000514743 IL13RA1P78552 427 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms