RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 WNT10AQ9GZT5 417 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 FAM192AQ9GZU8 254 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 NCOR1P1Q9H4R4 102 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 IFT22Q9H7X7 185 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 BABAM2Q9NXR7 383 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 IL36GQ9NZH8 169 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 OR6C3Q9NZP0 311 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 DPM3Q9P2X0 92 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 ZNF281Q9Y2X9 895 aa8.39□□□□□ -1.07
HMGXB3-205ENST00000514469 NOTCH1P46531 2555 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 DNAH3Q8TD57 4116 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 TET2Q6N021 2002 aaPredicted RBP8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 TRBV5-5A0A0J9YX44 114 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 KBTBD11-OT1A0A1B0GTJ5 212 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 LEUTXA8MZ59 168 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 LY6LH3BQJ8 138 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 HSPB6O14558 160 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 FBXO24O75426 580 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 IL1AP01583 271 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 IGFBP3P17936 291 aaPredicted RBP8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 MYL12AP19105 171 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 GLP1RP43220 463 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 KCNJ3P48549 501 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 BLCAPP62952 87 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 PPP3R1P63098 170 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 RSU1Q15404 277 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 LRRC36Q1X8D7 754 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 FBLN7Q53RD9 439 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 UTF1Q5T230 341 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 TPTE2P1Q5T6R2 138 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 DDI2Q5TDH0 399 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 RSBN1Q5VWQ0 802 aaPredicted RBP8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 DMKNQ6E0U4 476 aaPredicted RBP8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 Q6ZS46 218 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 SATL1Q86VE3 508 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 ZNF485Q8NCK3 441 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 OR13A1Q8NGR1 328 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 PLPPR1Q8TBJ4 325 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 CREB3L1Q96BA8 519 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 TMEM80Q96HE8 168 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 KIRREL1Q96J84 757 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 PGLYRP3Q96LB9 341 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 NR1H4Q96RI1 486 aaPredicted RBP8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 LINC00574Q9H8X3 128 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 LIN7BQ9HAP6 207 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 TMEM138Q9NPI0 162 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 ING3Q9NXR8 418 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 CALYQ9NYX4 217 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 CLEC2DQ9UHP7 191 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 KIF25Q9UIL4 384 aa8.38□□□□□ -1.07
HMGXB3-205ENST00000514469 MEIKINA0A087WXM9 373 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 OOSP1A8MZH6 123 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 BUB1B-PAK6H3BSN5 160 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 GPX5O75715 221 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 CDRT1O95170 752 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 OPN1MWP04001 364 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 OPN1MW2P0DN77 364 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 OPN1MW3P0DN78 364 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 CD28P10747 220 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 FSTP19883 344 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 BDKRB2P30411 391 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 BRS3P32247 399 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 ZNF93P35789 620 aaPredicted RBP8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 CEACAM3P40198 252 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 VDAC2P45880 294 aaPredicted RBP8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 ARHGDIBP52566 201 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 RBM11P57052 281 aaKnown RBP8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 RPS11P62280 158 aaKnown RBP eCLIP8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 RIPK1Q13546 671 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 RCN1Q15293 331 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 TMEM95Q3KNT9 176 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 YIF1BQ5BJH7 314 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 LINC00596Q86U02 117 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 DHRSXQ8N5I4 330 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 OR13C5Q8NGS8 318 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 OR9G1Q8NH87 305 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 GGHQ92820 318 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 GHSRQ92847 366 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 ORAI1Q96D31 301 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 OCSTAMPQ9BR26 566 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 METTL9Q9H1A3 318 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 MMP28Q9H239 520 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 CNOT2Q9NZN8 540 aaKnown RBP8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 ZNF581Q9P0T4 197 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 ST3GAL6Q9Y274 331 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 HSPE1-MOB4S4R3N1 261 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 TGP01266 2768 aa8.37□□□□□ -1.07
HMGXB3-205ENST00000514469 MAGEA13PA6NCF6 341 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 ADARB2-AS1A8MUL3 147 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 NPIPB11E5RHQ5 1161 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 H3BUI4 141 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 TOR1AO14656 332 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 CASQ2O14958 399 aaPredicted RBP8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 OR2F2O95006 317 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 HTR3BO95264 441 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 GNAO1P09471 354 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 CD24P25063 80 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 C21orf33P30042 268 aaPredicted RBP8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 CAPGP40121 348 aa8.36□□□□□ -1.07
HMGXB3-205ENST00000514469 PRRX1P54821 245 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms