RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 CSNK1A1P48729 337 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 CLDN20P56880 219 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 OR10A3P58181 314 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 RPS11P62280 158 aaKnown RBP eCLIP6.07□□□□□ -1.44
CLCN3-206ENST00000507875 MRPS11P82912 194 aaKnown RBP6.07□□□□□ -1.44
CLCN3-206ENST00000507875 OR2A2Q6IF42 318 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 ZNF100Q8IYN0 542 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 RDH10Q8IZV5 341 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 C1orf87Q8N0U7 546 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 OR6V1Q8N148 313 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 RBMXL3Q8N7X1 1067 aaKnown RBP6.07□□□□□ -1.44
CLCN3-206ENST00000507875 ZFP3Q96NJ6 502 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 OR2M2Q96R28 347 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 PFDN5Q99471 154 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 ZNF251Q9BRH9 671 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 NICN1Q9BSH3 213 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 SRXN1Q9BYN0 137 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 MMP28Q9H239 520 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 SYT4Q9H2B2 425 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 SLA2Q9H6Q3 261 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 NIPAL2Q9H841 368 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 GLTPQ9NZD2 209 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 FLVCR2Q9UPI3 526 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 GOLT1BQ9Y3E0 138 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 FLVCR1Q9Y5Y0 555 aa6.07□□□□□ -1.44
CLCN3-206ENST00000507875 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-206ENST00000507875 C13orf42A0A1B0GVH6 325 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 RPL36A-HNRNPH2H7BZ11 118 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 SLC16A7O60669 478 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 ARL6IP5O75915 188 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 CNIH1O95406 144 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 RAB3BP20337 219 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 EDNRAP25101 427 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 ACKR3P25106 362 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 NKX2-1P43699 371 aaPredicted RBP6.06□□□□□ -1.44
CLCN3-206ENST00000507875 CLDN17P56750 224 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 SNRPEP62304 92 aaKnown RBP6.06□□□□□ -1.44
CLCN3-206ENST00000507875 MICBQ29980 383 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 SLC18B1Q6NT16 456 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 FAM220AQ7Z4H9 259 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 TMEM17Q86X19 198 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 C17orf78Q8N4C9 275 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 OR5T2Q8NGG2 359 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 OTOSQ8NHW6 89 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 TSSK2Q96PF2 358 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 CSDC2Q9Y534 153 aaKnown RBP6.06□□□□□ -1.44
CLCN3-206ENST00000507875 MEIOCA2RUB1 952 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 ANKRD30BLA7E2S9 258 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 HSPB6O14558 160 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 WDR1O75083 606 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 NXPH3O95157 252 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 UCHL1P09936 223 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 HLA-DOBP13765 273 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 PITPNAQ00169 270 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 GK2Q14410 553 aaPredicted RBP6.06□□□□□ -1.44
CLCN3-206ENST00000507875 SLC25A35Q3KQZ1 300 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 ZNF684Q5T5D7 378 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 LRRN1Q6UXK5 716 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 AAED1Q7RTV5 226 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 PEG10Q86TG7 708 aaKnown RBP6.06□□□□□ -1.44
CLCN3-206ENST00000507875 SAMD12Q8N8I0 201 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 ZIC4Q8N9L1 334 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 SLC26A10Q8NG04 563 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 RPS4Y2Q8TD47 263 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 MRGPRDQ8TDS7 321 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 GMPPAQ96IJ6 420 aaPredicted RBP6.06□□□□□ -1.44
CLCN3-206ENST00000507875 FAM210BQ96KR6 192 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 GPR137Q96N19 417 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 PDCD1LG2Q9BQ51 273 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 PRRG4Q9BZD6 226 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 OR51M1Q9H341 326 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 RBFOX1Q9NWB1 397 aaKnown RBP6.06□□□□□ -1.44
CLCN3-206ENST00000507875 GSKIPQ9P0R6 139 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 FOXJ3Q9UPW0 622 aa6.06□□□□□ -1.44
CLCN3-206ENST00000507875 ALPK2Q86TB3 2170 aa6.05□□□□□ -1.44
CLCN3-206ENST00000507875 A0A0G2JMP0 313 aa6.05□□□□□ -1.44
CLCN3-206ENST00000507875 A0A0X1KG70 313 aa6.05□□□□□ -1.44
CLCN3-206ENST00000507875 PRR32B1ATL7 298 aa6.05□□□□□ -1.44
CLCN3-206ENST00000507875 DCTN6O00399 190 aa6.05□□□□□ -1.44
CLCN3-206ENST00000507875 SS18L1O75177 396 aaPredicted RBP6.05□□□□□ -1.44
CLCN3-206ENST00000507875 DFFBO76075 338 aa6.05□□□□□ -1.44
CLCN3-206ENST00000507875 EIF4EP06730 217 aaKnown RBP6.05□□□□□ -1.44
CLCN3-206ENST00000507875 SERPINE2P07093 398 aa6.05□□□□□ -1.44
CLCN3-206ENST00000507875 CSN3P07498 182 aa6.05□□□□□ -1.44
CLCN3-206ENST00000507875 FBP1P09467 338 aa6.05□□□□□ -1.44
CLCN3-206ENST00000507875 NHLRC4P0CG21 123 aaPredicted RBP6.05□□□□□ -1.44
CLCN3-206ENST00000507875 ALOX5APP20292 161 aa6.05□□□□□ -1.44
CLCN3-206ENST00000507875 RAB13P51153 203 aa6.05□□□□□ -1.44
CLCN3-206ENST00000507875 GUK1Q16774 197 aa6.05□□□□□ -1.44
CLCN3-206ENST00000507875 UNQ9370/PRO34162Q6UXP9 181 aa6.05□□□□□ -1.44
CLCN3-206ENST00000507875 ZNF627Q7L945 461 aa6.05□□□□□ -1.44
CLCN3-206ENST00000507875 MYPOPQ86VE0 399 aaPredicted RBP6.05□□□□□ -1.44
CLCN3-206ENST00000507875 PUSL1Q8N0Z8 303 aaKnown RBP6.05□□□□□ -1.44
CLCN3-206ENST00000507875 CCDC54Q8NEL0 328 aa6.05□□□□□ -1.44
CLCN3-206ENST00000507875 OR4M2Q8NGB6 313 aa6.05□□□□□ -1.44
CLCN3-206ENST00000507875 OR1L4Q8NGR5 311 aa6.05□□□□□ -1.44
CLCN3-206ENST00000507875 OR6N1Q8NGY5 312 aa6.05□□□□□ -1.44
CLCN3-206ENST00000507875 TRMT10AQ8TBZ6 339 aaKnown RBP6.05□□□□□ -1.44
CLCN3-206ENST00000507875 PIGCQ92535 297 aa6.05□□□□□ -1.44
CLCN3-206ENST00000507875 EMG1Q92979 244 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms