RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 OR2Y1Q8NGV0 311 aa12.89□□□□□ -0.35
SNF8-203ENST00000504000 TMEM171Q8WVE6 324 aa12.89□□□□□ -0.35
SNF8-203ENST00000504000 PIGCQ92535 297 aa12.89□□□□□ -0.35
SNF8-203ENST00000504000 JSRP1Q96MG2 331 aaPredicted RBP12.89□□□□□ -0.35
SNF8-203ENST00000504000 SIGLEC12Q96PQ1 595 aa12.89□□□□□ -0.35
SNF8-203ENST00000504000 ARID1AO14497 2285 aa12.89□□□□□ -0.35
SNF8-203ENST00000504000 MED12Q93074 2177 aa12.89□□□□□ -0.35
SNF8-203ENST00000504000 CACNA1EQ15878 2313 aa12.89□□□□□ -0.35
SNF8-203ENST00000504000 SHANK1Q9Y566 2161 aa12.89□□□□□ -0.35
SNF8-203ENST00000504000 LINC00587B1AMM8 73 aa12.89□□□□□ -0.35
SNF8-203ENST00000504000 LINC01387J3KSC0 135 aa12.89□□□□□ -0.35
SNF8-203ENST00000504000 PPIHO43447 177 aaKnown RBP12.89□□□□□ -0.35
SNF8-203ENST00000504000 CBR1P16152 277 aa12.89□□□□□ -0.35
SNF8-203ENST00000504000 RAB2AP61019 212 aa12.89□□□□□ -0.35
SNF8-203ENST00000504000 VAMP2P63027 116 aa12.89□□□□□ -0.35
SNF8-203ENST00000504000 TLE4Q04727 773 aa12.89□□□□□ -0.35
SNF8-203ENST00000504000 IL24Q13007 206 aa12.89□□□□□ -0.35
SNF8-203ENST00000504000 TGIF1Q15583 401 aa12.89□□□□□ -0.35
SNF8-203ENST00000504000 MPV17LQ2QL34 196 aa12.89□□□□□ -0.35
SNF8-203ENST00000504000 EXTL1Q92935 676 aa12.89□□□□□ -0.35
SNF8-203ENST00000504000 TMEM45BQ96B21 275 aa12.89□□□□□ -0.35
SNF8-203ENST00000504000 RARRES2Q99969 163 aa12.89□□□□□ -0.35
SNF8-203ENST00000504000 RIMS4Q9H426 269 aaPredicted RBP12.89□□□□□ -0.35
SNF8-203ENST00000504000 GPR35Q9HC97 309 aa12.89□□□□□ -0.35
SNF8-203ENST00000504000 RTTNQ86VV8 2226 aa12.88□□□□□ -0.35
SNF8-203ENST00000504000 H0Y980 276 aa12.88□□□□□ -0.35
SNF8-203ENST00000504000 H3BQ15 152 aa12.88□□□□□ -0.35
SNF8-203ENST00000504000 HSD17B6O14756 317 aa12.88□□□□□ -0.35
SNF8-203ENST00000504000 CLN5O75503 358 aa12.88□□□□□ -0.35
SNF8-203ENST00000504000 NQO2P16083 231 aa12.88□□□□□ -0.35
SNF8-203ENST00000504000 HOXA5P20719 270 aa12.88□□□□□ -0.35
SNF8-203ENST00000504000 CXCL12P48061 93 aa12.88□□□□□ -0.35
SNF8-203ENST00000504000 FGF12P61328 243 aa12.88□□□□□ -0.35
SNF8-203ENST00000504000 CEACAM16Q2WEN9 425 aa12.88□□□□□ -0.35
SNF8-203ENST00000504000 KHDC3LQ587J8 217 aa12.88□□□□□ -0.35
SNF8-203ENST00000504000 SLC35E3Q7Z769 313 aa12.88□□□□□ -0.35
SNF8-203ENST00000504000 IL22RA1Q8N6P7 574 aa12.88□□□□□ -0.35
SNF8-203ENST00000504000 OR5D13Q8NGL4 314 aa12.88□□□□□ -0.35
SNF8-203ENST00000504000 OR5C1Q8NGR4 320 aa12.88□□□□□ -0.35
SNF8-203ENST00000504000 ALKBH3Q96Q83 286 aaPredicted RBP12.88□□□□□ -0.35
SNF8-203ENST00000504000 P4HTMQ9NXG6 502 aa12.88□□□□□ -0.35
SNF8-203ENST00000504000 PUS1Q9Y606 427 aaKnown RBP eCLIP12.88□□□□□ -0.35
SNF8-203ENST00000504000 TRIOO75962 3097 aa12.88□□□□□ -0.35
SNF8-203ENST00000504000 LAMA1P25391 3075 aa12.88□□□□□ -0.35
SNF8-203ENST00000504000 CCDC85CA6NKD9 419 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 B4DEV8 164 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 GPR37O15354 613 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 IGHEP01854 428 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 EDN3P14138 238 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 CCL20P78556 96 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 SLC25A26Q70HW3 274 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 ODF3L1Q8IXM7 274 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 CMTM1Q8IZ96 169 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 OR2V1Q8NHB1 315 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 MR1Q95460 341 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 ATP23Q9Y6H3 246 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 TRBV6-6A0A0A6YYG2 114 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 SLC22A20A6NK97 555 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 YKT6O15498 198 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 ADAM20O43506 726 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 CYTIPO60759 359 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 DFFBO76075 338 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 SCAF4O95104 1147 aaKnown RBP12.87□□□□□ -0.35
SNF8-203ENST00000504000 IGHV2-70P01814 119 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 NPBWR2P48146 333 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 OR2B8PP59922 312 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 ACSF3Q4G176 576 aaPredicted RBP12.87□□□□□ -0.35
SNF8-203ENST00000504000 CXorf66Q5JRM2 361 aaPredicted RBP12.87□□□□□ -0.35
SNF8-203ENST00000504000 LYSMD4Q5XG99 296 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 ZNF818PQ6ZRF7 136 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 LINC00596Q86U02 117 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 ZFP62Q8NB50 900 aaPredicted RBP12.87□□□□□ -0.35
SNF8-203ENST00000504000 PLPPR1Q8TBJ4 325 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 RAB39BQ96DA2 213 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 TVP23CQ96ET8 276 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 REPIN1Q9BWE0 567 aaKnown RBP12.87□□□□□ -0.35
SNF8-203ENST00000504000 GLRX2Q9NS18 164 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 MIOXQ9UGB7 285 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 RNF115Q9Y4L5 304 aa12.87□□□□□ -0.35
SNF8-203ENST00000504000 G3V3Y1 287 aa12.86□□□□□ -0.35
SNF8-203ENST00000504000 SSSCA1O60232 199 aa12.86□□□□□ -0.35
SNF8-203ENST00000504000 P04436 131 aa12.86□□□□□ -0.35
SNF8-203ENST00000504000 PATE4P0C8F1 98 aa12.86□□□□□ -0.35
SNF8-203ENST00000504000 COX5BP10606 129 aa12.86□□□□□ -0.35
SNF8-203ENST00000504000 CDX1P47902 265 aaPredicted RBP12.86□□□□□ -0.35
SNF8-203ENST00000504000 DYNLT3P51808 116 aa12.86□□□□□ -0.35
SNF8-203ENST00000504000 TAS2R30P59541 319 aa12.86□□□□□ -0.35
SNF8-203ENST00000504000 ICAM4Q14773 271 aa12.86□□□□□ -0.35
SNF8-203ENST00000504000 SPIN3Q5JUX0 258 aa12.86□□□□□ -0.35
SNF8-203ENST00000504000 GAPTQ8N292 157 aa12.86□□□□□ -0.35
SNF8-203ENST00000504000 OR13D1Q8NGV5 346 aa12.86□□□□□ -0.35
SNF8-203ENST00000504000 FGFBP3Q8TAT2 258 aa12.86□□□□□ -0.35
SNF8-203ENST00000504000 CPNE4Q96A23 557 aaPredicted RBP12.86□□□□□ -0.35
SNF8-203ENST00000504000 ATP5SQ99766 215 aa12.86□□□□□ -0.35
SNF8-203ENST00000504000 LINC00470Q9BZP3 86 aa12.86□□□□□ -0.35
SNF8-203ENST00000504000 PLK3Q9H4B4 646 aa12.86□□□□□ -0.35
SNF8-203ENST00000504000 ZNF587BE7ETH6 402 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 CXCL13O43927 109 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 ELOBQ15370 118 aa12.85□□□□□ -0.35
SNF8-203ENST00000504000 AKR1C8PQ5T2L2 129 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms