RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 ZNF695Q8IW36 515 aa14.18□□□□□ -0.14
VCAN-204ENST00000502527 OR1K1Q8NGR3 316 aa14.18□□□□□ -0.14
VCAN-204ENST00000502527 LYPD6BQ8NI32 183 aa14.18□□□□□ -0.14
VCAN-204ENST00000502527 NANOS1Q8WY41 292 aaKnown RBP14.18□□□□□ -0.14
VCAN-204ENST00000502527 BSCL2Q96G97 398 aaPredicted RBP14.18□□□□□ -0.14
VCAN-204ENST00000502527 SPIN2AQ99865 258 aa14.18□□□□□ -0.14
VCAN-204ENST00000502527 SPIN2BQ9BPZ2 258 aa14.18□□□□□ -0.14
VCAN-204ENST00000502527 AIFM2Q9BRQ8 373 aa14.18□□□□□ -0.14
VCAN-204ENST00000502527 GINS3Q9BRX5 216 aa14.18□□□□□ -0.14
VCAN-204ENST00000502527 IL36RNQ9UBH0 155 aa14.18□□□□□ -0.14
VCAN-204ENST00000502527 RCL1Q9Y2P8 373 aaKnown RBP14.18□□□□□ -0.14
VCAN-204ENST00000502527 ATP23Q9Y6H3 246 aa14.18□□□□□ -0.14
VCAN-204ENST00000502527 TUSC2O75896 110 aa14.18□□□□□ -0.14
VCAN-204ENST00000502527 CD5P06127 495 aa14.18□□□□□ -0.14
VCAN-204ENST00000502527 IL32P24001 234 aa14.18□□□□□ -0.14
VCAN-204ENST00000502527 GNG3P63215 75 aa14.18□□□□□ -0.14
VCAN-204ENST00000502527 TSC22D1Q15714 1073 aa14.18□□□□□ -0.14
VCAN-204ENST00000502527 HIKESHIQ53FT3 197 aa14.18□□□□□ -0.14
VCAN-204ENST00000502527 HES3Q5TGS1 186 aa14.18□□□□□ -0.14
VCAN-204ENST00000502527 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.18□□□□□ -0.14
VCAN-204ENST00000502527 IL22RA1Q8N6P7 574 aa14.18□□□□□ -0.14
VCAN-204ENST00000502527 DMBX1Q8NFW5 382 aa14.18□□□□□ -0.14
VCAN-204ENST00000502527 WNT2BQ93097 391 aa14.18□□□□□ -0.14
VCAN-204ENST00000502527 C12orf49Q9H741 205 aa14.18□□□□□ -0.14
VCAN-204ENST00000502527 WFDC1Q9HC57 220 aa14.18□□□□□ -0.14
VCAN-204ENST00000502527 ZDHHC8Q9ULC8 765 aa14.18□□□□□ -0.14
VCAN-204ENST00000502527 NKX2-6A6NCS4 301 aa14.17□□□□□ -0.14
VCAN-204ENST00000502527 SLC22A20A6NK97 555 aa14.17□□□□□ -0.14
VCAN-204ENST00000502527 HSPB6O14558 160 aa14.17□□□□□ -0.14
VCAN-204ENST00000502527 SLC34A2O95436 690 aa14.17□□□□□ -0.14
VCAN-204ENST00000502527 WNT5AP41221 380 aa14.17□□□□□ -0.14
VCAN-204ENST00000502527 HERPUD1Q15011 391 aa14.17□□□□□ -0.14
VCAN-204ENST00000502527 FAM76BQ5HYJ3 339 aa14.17□□□□□ -0.14
VCAN-204ENST00000502527 FBXW9Q5XUX1 488 aa14.17□□□□□ -0.14
VCAN-204ENST00000502527 DHRS7BQ6IAN0 325 aaPredicted RBP14.17□□□□□ -0.14
VCAN-204ENST00000502527 ZNF818PQ6ZRF7 136 aa14.17□□□□□ -0.14
VCAN-204ENST00000502527 GAPTQ8N292 157 aa14.17□□□□□ -0.14
VCAN-204ENST00000502527 SUMF2Q8NBJ7 301 aa14.17□□□□□ -0.14
VCAN-204ENST00000502527 BCL2L2Q92843 193 aaPredicted RBP14.17□□□□□ -0.14
VCAN-204ENST00000502527 ADAT1Q9BUB4 502 aaKnown RBP14.17□□□□□ -0.14
VCAN-204ENST00000502527 LIPGQ9Y5X9 500 aa14.17□□□□□ -0.14
VCAN-204ENST00000502527 IL18BPO95998 194 aa14.16□□□□□ -0.14
VCAN-204ENST00000502527 H2AFB1P0C5Y9 115 aa14.16□□□□□ -0.14
VCAN-204ENST00000502527 SFTA3P0C7M3 94 aa14.16□□□□□ -0.14
VCAN-204ENST00000502527 NOVA1P51513 510 aaKnown RBP14.16□□□□□ -0.14
VCAN-204ENST00000502527 DVL1P1P54792 670 aaPredicted RBP14.16□□□□□ -0.14
VCAN-204ENST00000502527 IL24Q13007 206 aa14.16□□□□□ -0.14
VCAN-204ENST00000502527 TMEM88Q6PEY1 159 aa14.16□□□□□ -0.14
VCAN-204ENST00000502527 USB1Q9BQ65 265 aaKnown RBP14.16□□□□□ -0.14
VCAN-204ENST00000502527 DEFB127Q9H1M4 99 aa14.16□□□□□ -0.14
VCAN-204ENST00000502527 LUZP4Q9P127 313 aa14.16□□□□□ -0.14
VCAN-204ENST00000502527 NDRG3Q9UGV2 375 aa14.16□□□□□ -0.14
VCAN-204ENST00000502527 TNRC6AQ8NDV7 1962 aaKnown RBP14.16□□□□□ -0.14
VCAN-204ENST00000502527 TRBV6-6A0A0A6YYG2 114 aa14.16□□□□□ -0.14
VCAN-204ENST00000502527 DUXBA0A1W2PPF3 345 aa14.16□□□□□ -0.14
VCAN-204ENST00000502527 AGPAT2O15120 278 aa14.16□□□□□ -0.14
VCAN-204ENST00000502527 TSPAN15O95858 294 aa14.16□□□□□ -0.14
VCAN-204ENST00000502527 DANCRP0C864 163 aa14.16□□□□□ -0.14
VCAN-204ENST00000502527 SPP1P10451 314 aa14.16□□□□□ -0.14
VCAN-204ENST00000502527 PVALBP20472 110 aaPredicted RBP14.16□□□□□ -0.14
VCAN-204ENST00000502527 CMTM1Q8IZ96 169 aa14.16□□□□□ -0.14
VCAN-204ENST00000502527 SELENOHQ8IZQ5 122 aaKnown RBP14.16□□□□□ -0.14
VCAN-204ENST00000502527 COMMD1Q8N668 190 aa14.16□□□□□ -0.14
VCAN-204ENST00000502527 WDYHV1Q96HA8 205 aa14.16□□□□□ -0.14
VCAN-204ENST00000502527 ABHD14BQ96IU4 210 aa14.16□□□□□ -0.14
VCAN-204ENST00000502527 PKIBQ9C010 78 aa14.16□□□□□ -0.14
VCAN-204ENST00000502527 GP6Q9HCN6 339 aa14.16□□□□□ -0.14
VCAN-204ENST00000502527 FREM1Q5H8C1 2179 aa14.16□□□□□ -0.14
VCAN-204ENST00000502527 SHANK1Q9Y566 2161 aa14.16□□□□□ -0.14
VCAN-204ENST00000502527 ARID1AO14497 2285 aa14.15□□□□□ -0.14
VCAN-204ENST00000502527 FREM2Q5SZK8 3169 aa14.15□□□□□ -0.14
VCAN-204ENST00000502527 TRGV5A0A0B4J1U4 118 aa14.15□□□□□ -0.14
VCAN-204ENST00000502527 F12P00748 615 aaPredicted RBP14.15□□□□□ -0.14
VCAN-204ENST00000502527 OR8U9P0C7N5 309 aa14.15□□□□□ -0.14
VCAN-204ENST00000502527 CD80P33681 288 aa14.15□□□□□ -0.14
VCAN-204ENST00000502527 NKX2-1P43699 371 aaPredicted RBP14.15□□□□□ -0.14
VCAN-204ENST00000502527 RAB5CP51148 216 aa14.15□□□□□ -0.14
VCAN-204ENST00000502527 NHLH2Q02577 135 aa14.15□□□□□ -0.14
VCAN-204ENST00000502527 C5orf24Q7Z6I8 188 aa14.15□□□□□ -0.14
VCAN-204ENST00000502527 MDP1Q86V88 176 aa14.15□□□□□ -0.14
VCAN-204ENST00000502527 FAM58AQ8N1B3 248 aa14.15□□□□□ -0.14
VCAN-204ENST00000502527 OR8U1Q8NH10 309 aa14.15□□□□□ -0.14
VCAN-204ENST00000502527 MRPL30Q8TCC3 161 aaKnown RBP14.15□□□□□ -0.14
VCAN-204ENST00000502527 BOD1Q96IK1 185 aa14.15□□□□□ -0.14
VCAN-204ENST00000502527 GPR179Q6PRD1 2367 aa14.15□□□□□ -0.14
VCAN-204ENST00000502527 IGKV1D-13A0A0B4J2D9 117 aa14.14□□□□□ -0.15
VCAN-204ENST00000502527 IGKV1-6A0A0C4DH72 117 aa14.14□□□□□ -0.15
VCAN-204ENST00000502527 H7C2Y5 167 aa14.14□□□□□ -0.15
VCAN-204ENST00000502527 LILRA1O75019 489 aa14.14□□□□□ -0.15
VCAN-204ENST00000502527 TSPAN9O75954 239 aa14.14□□□□□ -0.15
VCAN-204ENST00000502527 IGKV1-13P0DP09 117 aa14.14□□□□□ -0.15
VCAN-204ENST00000502527 ID4P47928 161 aa14.14□□□□□ -0.15
VCAN-204ENST00000502527 NPBWR1P48145 328 aa14.14□□□□□ -0.15
VCAN-204ENST00000502527 EWSR1Q01844 656 aaKnown RBP eCLIP14.14□□□□□ -0.15
VCAN-204ENST00000502527 CBLN2Q8IUK8 224 aa14.14□□□□□ -0.15
VCAN-204ENST00000502527 OR2C3Q8N628 320 aa14.14□□□□□ -0.15
VCAN-204ENST00000502527 KIRREL1Q96J84 757 aa14.14□□□□□ -0.15
VCAN-204ENST00000502527 ZNF488Q96MN9 340 aa14.14□□□□□ -0.15
VCAN-204ENST00000502527 LHX6Q9UPM6 363 aa14.14□□□□□ -0.15
VCAN-204ENST00000502527 STRAPQ9Y3F4 350 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms