RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 PLPPR1Q8TBJ4 325 aa12.97□□□□□ -0.33
NR1H3-227ENST00000498548 NPFFR1Q9GZQ6 430 aa12.97□□□□□ -0.33
NR1H3-227ENST00000498548 ZNF702PQ9H963 129 aa12.97□□□□□ -0.33
NR1H3-227ENST00000498548 NKX1-2Q9UD57 310 aaPredicted RBP12.97□□□□□ -0.33
NR1H3-227ENST00000498548 KIF25Q9UIL4 384 aa12.97□□□□□ -0.33
NR1H3-227ENST00000498548 MINOS1-NBL1R4GNA1 71 aa12.97□□□□□ -0.33
NR1H3-227ENST00000498548 TRAV39A0A0B4J263 110 aa12.96□□□□□ -0.33
NR1H3-227ENST00000498548 TRBV5-5A0A0J9YX44 114 aa12.96□□□□□ -0.33
NR1H3-227ENST00000498548 A0A1W2PP11 408 aa12.96□□□□□ -0.33
NR1H3-227ENST00000498548 MAGEA13PA6NCF6 341 aa12.96□□□□□ -0.33
NR1H3-227ENST00000498548 CASQ2O14958 399 aaPredicted RBP12.96□□□□□ -0.33
NR1H3-227ENST00000498548 IGHV3-7P01780 117 aa12.96□□□□□ -0.33
NR1H3-227ENST00000498548 CSN2P05814 226 aa12.96□□□□□ -0.33
NR1H3-227ENST00000498548 IGFBP3P17936 291 aaPredicted RBP12.96□□□□□ -0.33
NR1H3-227ENST00000498548 NFYBP25208 207 aa12.96□□□□□ -0.33
NR1H3-227ENST00000498548 C21orf33P30042 268 aaPredicted RBP12.96□□□□□ -0.33
NR1H3-227ENST00000498548 ZNF93P35789 620 aaPredicted RBP12.96□□□□□ -0.33
NR1H3-227ENST00000498548 RPS11P62280 158 aaKnown RBP eCLIP12.96□□□□□ -0.33
NR1H3-227ENST00000498548 PPP3R1P63098 170 aa12.96□□□□□ -0.33
NR1H3-227ENST00000498548 HERPUD1Q15011 391 aa12.96□□□□□ -0.33
NR1H3-227ENST00000498548 LTC4SQ16873 150 aa12.96□□□□□ -0.33
NR1H3-227ENST00000498548 OR52W1Q6IF63 320 aa12.96□□□□□ -0.33
NR1H3-227ENST00000498548 LIAT1Q6ZQX7 453 aa12.96□□□□□ -0.33
NR1H3-227ENST00000498548 AHSA2Q719I0 299 aa12.96□□□□□ -0.33
NR1H3-227ENST00000498548 KLHDC1Q8N7A1 406 aa12.96□□□□□ -0.33
NR1H3-227ENST00000498548 OR51T1Q8NGJ9 327 aa12.96□□□□□ -0.33
NR1H3-227ENST00000498548 OR13A1Q8NGR1 328 aa12.96□□□□□ -0.33
NR1H3-227ENST00000498548 CPNE2Q96FN4 548 aaPredicted RBP12.96□□□□□ -0.33
NR1H3-227ENST00000498548 PGLYRP3Q96LB9 341 aa12.96□□□□□ -0.33
NR1H3-227ENST00000498548 METTL9Q9H1A3 318 aa12.96□□□□□ -0.33
NR1H3-227ENST00000498548 RANBP3Q9H6Z4 567 aaPredicted RBP12.96□□□□□ -0.33
NR1H3-227ENST00000498548 TMEM138Q9NPI0 162 aa12.96□□□□□ -0.33
NR1H3-227ENST00000498548 PSORS1C1Q9UIG5 152 aa12.96□□□□□ -0.33
NR1H3-227ENST00000498548 HSPE1-MOB4S4R3N1 261 aa12.96□□□□□ -0.33
NR1H3-227ENST00000498548 TRAV8-7A0A075B6U6 113 aa12.95□□□□□ -0.34
NR1H3-227ENST00000498548 MEIKINA0A087WXM9 373 aa12.95□□□□□ -0.34
NR1H3-227ENST00000498548 EFCAB10A6NFE3 127 aa12.95□□□□□ -0.34
NR1H3-227ENST00000498548 H0YHG0 523 aa12.95□□□□□ -0.34
NR1H3-227ENST00000498548 F2RL2O00254 374 aa12.95□□□□□ -0.34
NR1H3-227ENST00000498548 SERPINA2P20848 420 aa12.95□□□□□ -0.34
NR1H3-227ENST00000498548 GLP1RP43220 463 aa12.95□□□□□ -0.34
NR1H3-227ENST00000498548 BLCAPP62952 87 aa12.95□□□□□ -0.34
NR1H3-227ENST00000498548 DEFA6Q01524 100 aa12.95□□□□□ -0.34
NR1H3-227ENST00000498548 IL13RA2Q14627 380 aa12.95□□□□□ -0.34
NR1H3-227ENST00000498548 FBLN7Q53RD9 439 aa12.95□□□□□ -0.34
NR1H3-227ENST00000498548 RTN4RL2Q86UN3 420 aa12.95□□□□□ -0.34
NR1H3-227ENST00000498548 LYG1Q8N1E2 194 aa12.95□□□□□ -0.34
NR1H3-227ENST00000498548 OSR2Q8N2R0 312 aa12.95□□□□□ -0.34
NR1H3-227ENST00000498548 STX19Q8N4C7 294 aa12.95□□□□□ -0.34
NR1H3-227ENST00000498548 OR4D6Q8NGJ1 314 aa12.95□□□□□ -0.34
NR1H3-227ENST00000498548 LEAP2Q969E1 77 aa12.95□□□□□ -0.34
NR1H3-227ENST00000498548 OR5M11Q96RB7 305 aa12.95□□□□□ -0.34
NR1H3-227ENST00000498548 ZNF184Q99676 751 aaPredicted RBP12.95□□□□□ -0.34
NR1H3-227ENST00000498548 DPM3Q9P2X0 92 aa12.95□□□□□ -0.34
NR1H3-227ENST00000498548 ST3GAL6Q9Y274 331 aa12.95□□□□□ -0.34
NR1H3-227ENST00000498548 WNK1Q9H4A3 2382 aa12.95□□□□□ -0.34
NR1H3-227ENST00000498548 PKD1L1Q8TDX9 2849 aa12.94□□□□□ -0.34
NR1H3-227ENST00000498548 MGAM2Q2M2H8 2515 aa12.94□□□□□ -0.34
NR1H3-227ENST00000498548 ZNF729A6NN14 1252 aaPredicted RBP12.94□□□□□ -0.34
NR1H3-227ENST00000498548 TOR1AO14656 332 aa12.94□□□□□ -0.34
NR1H3-227ENST00000498548 CSTBP04080 98 aaKnown RBP12.94□□□□□ -0.34
NR1H3-227ENST00000498548 CGB3P0DN86 165 aa12.94□□□□□ -0.34
NR1H3-227ENST00000498548 CGB7P0DN87 165 aa12.94□□□□□ -0.34
NR1H3-227ENST00000498548 RIPK1Q13546 671 aa12.94□□□□□ -0.34
NR1H3-227ENST00000498548 RBM39Q14498 530 aaKnown RBP12.94□□□□□ -0.34
NR1H3-227ENST00000498548 Q499Y3 187 aa12.94□□□□□ -0.34
NR1H3-227ENST00000498548 RSBN1Q5VWQ0 802 aaPredicted RBP12.94□□□□□ -0.34
NR1H3-227ENST00000498548 Q6ZTK2 550 aa12.94□□□□□ -0.34
NR1H3-227ENST00000498548 SUMF2Q8NBJ7 301 aa12.94□□□□□ -0.34
NR1H3-227ENST00000498548 Q8NFD4 153 aa12.94□□□□□ -0.34
NR1H3-227ENST00000498548 RFESDQ8TAC1 157 aa12.94□□□□□ -0.34
NR1H3-227ENST00000498548 MRGPRDQ8TDS7 321 aa12.94□□□□□ -0.34
NR1H3-227ENST00000498548 FBLIM1Q8WUP2 373 aa12.94□□□□□ -0.34
NR1H3-227ENST00000498548 OR14A2Q96R54 314 aa12.94□□□□□ -0.34
NR1H3-227ENST00000498548 S100A13Q99584 98 aa12.94□□□□□ -0.34
NR1H3-227ENST00000498548 CDCA4Q9BXL8 241 aa12.94□□□□□ -0.34
NR1H3-227ENST00000498548 BARHL1Q9BZE3 327 aa12.94□□□□□ -0.34
NR1H3-227ENST00000498548 MMP27Q9H306 513 aa12.94□□□□□ -0.34
NR1H3-227ENST00000498548 SERTAD4Q9NUC0 356 aa12.94□□□□□ -0.34
NR1H3-227ENST00000498548 CNOT2Q9NZN8 540 aaKnown RBP12.94□□□□□ -0.34
NR1H3-227ENST00000498548 OR6C3Q9NZP0 311 aa12.94□□□□□ -0.34
NR1H3-227ENST00000498548 PITPNC1Q9UKF7 332 aa12.94□□□□□ -0.34
NR1H3-227ENST00000498548 KBTBD11-OT1A0A1B0GTJ5 212 aa12.93□□□□□ -0.34
NR1H3-227ENST00000498548 GEMIN2O14893 280 aaKnown RBP12.93□□□□□ -0.34
NR1H3-227ENST00000498548 OR7C1O76099 320 aaPredicted RBP12.93□□□□□ -0.34
NR1H3-227ENST00000498548 IGLV1-47P01700 117 aa12.93□□□□□ -0.34
NR1H3-227ENST00000498548 CD34P28906 385 aa12.93□□□□□ -0.34
NR1H3-227ENST00000498548 DYNLT3P51808 116 aa12.93□□□□□ -0.34
NR1H3-227ENST00000498548 BDH1Q02338 343 aa12.93□□□□□ -0.34
NR1H3-227ENST00000498548 SLC22A6Q4U2R8 563 aa12.93□□□□□ -0.34
NR1H3-227ENST00000498548 YIF1BQ5BJH7 314 aa12.93□□□□□ -0.34
NR1H3-227ENST00000498548 ZNF565Q8N9K5 539 aa12.93□□□□□ -0.34
NR1H3-227ENST00000498548 ZNF596Q8TC21 504 aa12.93□□□□□ -0.34
NR1H3-227ENST00000498548 TFAP2CQ92754 450 aa12.93□□□□□ -0.34
NR1H3-227ENST00000498548 MUL1Q969V5 352 aa12.93□□□□□ -0.34
NR1H3-227ENST00000498548 KIRREL1Q96J84 757 aa12.93□□□□□ -0.34
NR1H3-227ENST00000498548 DPCDQ9BVM2 203 aaPredicted RBP12.93□□□□□ -0.34
NR1H3-227ENST00000498548 PRSS22Q9GZN4 317 aa12.93□□□□□ -0.34
NR1H3-227ENST00000498548 PLCXD1Q9NUJ7 323 aa12.93□□□□□ -0.34
NR1H3-227ENST00000498548 CALYQ9NYX4 217 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms