RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, human

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM53-209	ENST00000495630	CDX1	P47902	265 aa	Predicted RBP	13.8	□□□□□ -0.2
TMEM53-209	ENST00000495630	LUM	P51884	338 aa	Predicted RBP	13.8	□□□□□ -0.2
TMEM53-209	ENST00000495630	BNIP1	Q12981	228 aa		13.8	□□□□□ -0.2
TMEM53-209	ENST00000495630	SLC16A12	Q6ZSM3	486 aa		13.8	□□□□□ -0.2
TMEM53-209	ENST00000495630	OR8U1	Q8NH10	309 aa		13.8	□□□□□ -0.2
TMEM53-209	ENST00000495630	OPALIN	Q96PE5	141 aa		13.8	□□□□□ -0.2
TMEM53-209	ENST00000495630	ASCL2	Q99929	193 aa		13.8	□□□□□ -0.2
TMEM53-209	ENST00000495630	THTPA	Q9BU02	230 aa		13.8	□□□□□ -0.2
TMEM53-209	ENST00000495630	ING3	Q9NXR8	418 aa		13.8	□□□□□ -0.2
TMEM53-209	ENST00000495630	SCOC	Q9UIL1	159 aa		13.8	□□□□□ -0.2
TMEM53-209	ENST00000495630	LINC01548	A6NM66	108 aa		13.79	□□□□□ -0.2
TMEM53-209	ENST00000495630	AP4M1	O00189	453 aa		13.79	□□□□□ -0.2
TMEM53-209	ENST00000495630	MT-ND2	P03891	347 aa		13.79	□□□□□ -0.2
TMEM53-209	ENST00000495630	ISG15	P05161	165 aa		13.79	□□□□□ -0.2
TMEM53-209	ENST00000495630	OCM2	P0CE71	109 aa		13.79	□□□□□ -0.2
TMEM53-209	ENST00000495630	OCM	P0CE72	109 aa	Predicted RBP	13.79	□□□□□ -0.2
TMEM53-209	ENST00000495630	ZNF20	P17024	532 aa		13.79	□□□□□ -0.2
TMEM53-209	ENST00000495630	C21orf33	P30042	268 aa	Predicted RBP	13.79	□□□□□ -0.2
TMEM53-209	ENST00000495630	HTR1F	P30939	366 aa		13.79	□□□□□ -0.2
TMEM53-209	ENST00000495630	KIR3DL2	P43630	455 aa		13.79	□□□□□ -0.2
TMEM53-209	ENST00000495630	GNGT1	P63211	74 aa		13.79	□□□□□ -0.2
TMEM53-209	ENST00000495630	EBI3	Q14213	229 aa		13.79	□□□□□ -0.2
TMEM53-209	ENST00000495630	LCNL1	Q6ZST4	164 aa		13.79	□□□□□ -0.2
TMEM53-209	ENST00000495630	SPATA24	Q86W54	205 aa		13.79	□□□□□ -0.2
TMEM53-209	ENST00000495630	OR10H4	Q8NGA5	316 aa		13.79	□□□□□ -0.2
TMEM53-209	ENST00000495630	MUC7	Q8TAX7	377 aa		13.79	□□□□□ -0.2
TMEM53-209	ENST00000495630	RFT1	Q96AA3	541 aa		13.79	□□□□□ -0.2
TMEM53-209	ENST00000495630	PSG11	Q9UQ72	335 aa		13.79	□□□□□ -0.2
TMEM53-209	ENST00000495630	ATP8B1	O43520	1251 aa		13.78	□□□□□ -0.2
TMEM53-209	ENST00000495630	IGKV1D-33	P01593	117 aa		13.78	□□□□□ -0.2
TMEM53-209	ENST00000495630	IGKV1-33	P01594	117 aa		13.78	□□□□□ -0.2
TMEM53-209	ENST00000495630	EPHA2	P29317	976 aa		13.78	□□□□□ -0.2
TMEM53-209	ENST00000495630	ATP6V1E1	P36543	226 aa		13.78	□□□□□ -0.2
TMEM53-209	ENST00000495630	ISL1	P61371	349 aa		13.78	□□□□□ -0.2
TMEM53-209	ENST00000495630	FOXE3	Q13461	319 aa		13.78	□□□□□ -0.2
TMEM53-209	ENST00000495630	DIAPH2-AS1	Q14236	149 aa		13.78	□□□□□ -0.2
TMEM53-209	ENST00000495630	CXorf66	Q5JRM2	361 aa	Predicted RBP	13.78	□□□□□ -0.2
TMEM53-209	ENST00000495630	CASC10	Q5T4H9	136 aa		13.78	□□□□□ -0.2
TMEM53-209	ENST00000495630	TGIF2LX	Q8IUE1	241 aa		13.78	□□□□□ -0.2
TMEM53-209	ENST00000495630	OR51T1	Q8NGJ9	327 aa		13.78	□□□□□ -0.2
TMEM53-209	ENST00000495630	OR2G2	Q8NGZ5	317 aa		13.78	□□□□□ -0.2
TMEM53-209	ENST00000495630	RNF166	Q96A37	237 aa	Predicted RBP	13.78	□□□□□ -0.2
TMEM53-209	ENST00000495630	MBOAT4	Q96T53	435 aa		13.78	□□□□□ -0.2
TMEM53-209	ENST00000495630	PPIL3	Q9H2H8	161 aa	Known RBP	13.78	□□□□□ -0.2
TMEM53-209	ENST00000495630	CALY	Q9NYX4	217 aa		13.78	□□□□□ -0.2
TMEM53-209	ENST00000495630	IDI2-AS1	Q9NZ38	188 aa		13.78	□□□□□ -0.2
TMEM53-209	ENST00000495630	SIRT4	Q9Y6E7	314 aa	Predicted RBP	13.78	□□□□□ -0.2
TMEM53-209	ENST00000495630	STAB2	Q8WWQ8	2551 aa		13.78	□□□□□ -0.2
TMEM53-209	ENST00000495630	TCRBV3S1	A0A5B6	114 aa		13.77	□□□□□ -0.21
TMEM53-209	ENST00000495630	SEC14L6	B5MCN3	397 aa		13.77	□□□□□ -0.21
TMEM53-209	ENST00000495630	NPIPB11	E5RHQ5	1161 aa		13.77	□□□□□ -0.21
TMEM53-209	ENST00000495630	MITF	O75030	526 aa	Predicted RBP	13.77	□□□□□ -0.21
TMEM53-209	ENST00000495630	IGHV3-7	P01780	117 aa		13.77	□□□□□ -0.21
TMEM53-209	ENST00000495630	RPLP1	P05386	114 aa	Known RBP	13.77	□□□□□ -0.21
TMEM53-209	ENST00000495630	ELANE	P08246	267 aa		13.77	□□□□□ -0.21
TMEM53-209	ENST00000495630	TMED1	Q13445	227 aa		13.77	□□□□□ -0.21
TMEM53-209	ENST00000495630	GPR50	Q13585	617 aa		13.77	□□□□□ -0.21
TMEM53-209	ENST00000495630	ATXN7L3	Q14CW9	347 aa	Predicted RBP	13.77	□□□□□ -0.21
TMEM53-209	ENST00000495630	CDK5R1	Q15078	307 aa		13.77	□□□□□ -0.21
TMEM53-209	ENST00000495630	FAM220A	Q7Z4H9	259 aa		13.77	□□□□□ -0.21
TMEM53-209	ENST00000495630	KCTD20	Q7Z5Y7	419 aa		13.77	□□□□□ -0.21
TMEM53-209	ENST00000495630	RNF152	Q8N8N0	203 aa		13.77	□□□□□ -0.21
TMEM53-209	ENST00000495630	OR10A7	Q8NGE5	316 aa		13.77	□□□□□ -0.21
TMEM53-209	ENST00000495630	LEAP2	Q969E1	77 aa		13.77	□□□□□ -0.21
TMEM53-209	ENST00000495630	UTP4	Q969X6	686 aa	Known RBP	13.77	□□□□□ -0.21
TMEM53-209	ENST00000495630	OSBPL10	Q9BXB5	764 aa		13.77	□□□□□ -0.21
TMEM53-209	ENST00000495630	BARHL1	Q9BZE3	327 aa		13.77	□□□□□ -0.21
TMEM53-209	ENST00000495630	ABCG5	Q9H222	651 aa		13.77	□□□□□ -0.21
TMEM53-209	ENST00000495630	NEK6	Q9HC98	313 aa		13.77	□□□□□ -0.21
TMEM53-209	ENST00000495630	GNG8	Q9UK08	70 aa		13.77	□□□□□ -0.21
TMEM53-209	ENST00000495630	MEIKIN	A0A087WXM9	373 aa		13.76	□□□□□ -0.21
TMEM53-209	ENST00000495630	NCBP2L	A6PVI3	153 aa	Known RBP	13.76	□□□□□ -0.21
TMEM53-209	ENST00000495630	APOL3	O95236	402 aa		13.76	□□□□□ -0.21
TMEM53-209	ENST00000495630	IL1A	P01583	271 aa		13.76	□□□□□ -0.21
TMEM53-209	ENST00000495630	GAPDH	P04406	335 aa	Known RBP	13.76	□□□□□ -0.21
TMEM53-209	ENST00000495630	DBT	P11182	482 aa	Known RBP	13.76	□□□□□ -0.21
TMEM53-209	ENST00000495630	GPR12	P47775	334 aa		13.76	□□□□□ -0.21
TMEM53-209	ENST00000495630	FLOT2	Q14254	428 aa		13.76	□□□□□ -0.21
TMEM53-209	ENST00000495630	FDX2	Q6P4F2	183 aa		13.76	□□□□□ -0.21
TMEM53-209	ENST00000495630		Q8NFD4	153 aa		13.76	□□□□□ -0.21
TMEM53-209	ENST00000495630	OR5D18	Q8NGL1	313 aa		13.76	□□□□□ -0.21
TMEM53-209	ENST00000495630	SPACA5	Q96QH8	159 aa		13.76	□□□□□ -0.21
TMEM53-209	ENST00000495630	LIN7C	Q9NUP9	197 aa	Known RBP	13.76	□□□□□ -0.21
TMEM53-209	ENST00000495630	FRRS1L	Q9P0K9	344 aa		13.76	□□□□□ -0.21
TMEM53-209	ENST00000495630	KIF25	Q9UIL4	384 aa		13.76	□□□□□ -0.21
TMEM53-209	ENST00000495630	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.76	□□□□□ -0.21
TMEM53-209	ENST00000495630	TENM2	Q9NT68	2774 aa		13.76	□□□□□ -0.21
TMEM53-209	ENST00000495630	CCRL2	O00421	344 aa		13.75	□□□□□ -0.21
TMEM53-209	ENST00000495630	MPZL2	O60487	215 aa		13.75	□□□□□ -0.21
TMEM53-209	ENST00000495630	TMEM225B	P0DP42	221 aa		13.75	□□□□□ -0.21
TMEM53-209	ENST00000495630	GLP1R	P43220	463 aa		13.75	□□□□□ -0.21
TMEM53-209	ENST00000495630	ZNF85	Q03923	595 aa		13.75	□□□□□ -0.21
TMEM53-209	ENST00000495630	ZNF816	Q0VGE8	651 aa	Predicted RBP	13.75	□□□□□ -0.21
TMEM53-209	ENST00000495630	DEFB136	Q30KP8	78 aa		13.75	□□□□□ -0.21
TMEM53-209	ENST00000495630	TP53I3	Q53FA7	332 aa		13.75	□□□□□ -0.21
TMEM53-209	ENST00000495630	OR13A1	Q8NGR1	328 aa		13.75	□□□□□ -0.21
TMEM53-209	ENST00000495630	OR10X1	Q8NGY0	326 aa		13.75	□□□□□ -0.21
TMEM53-209	ENST00000495630	EAF1	Q96JC9	268 aa	Predicted RBP	13.75	□□□□□ -0.21
TMEM53-209	ENST00000495630	ENOPH1	Q9UHY7	261 aa		13.75	□□□□□ -0.21
TMEM53-209	ENST00000495630	SMAD5-AS1	Q9Y6J3	95 aa		13.75	□□□□□ -0.21

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