RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 SLC16A12Q6ZSM3 486 aa14.11□□□□□ -0.15
HDAC6-235ENST00000495515 PTX4Q96A99 478 aa14.11□□□□□ -0.15
HDAC6-235ENST00000495515 RCC2Q9P258 522 aaKnown RBP14.11□□□□□ -0.15
HDAC6-235ENST00000495515 PEX16Q9Y5Y5 336 aa14.11□□□□□ -0.15
HDAC6-235ENST00000495515 TRGV10A0A0A0MS01 117 aa14.1□□□□□ -0.15
HDAC6-235ENST00000495515 TMEM272A0A1B0GTI8 110 aa14.1□□□□□ -0.15
HDAC6-235ENST00000495515 METTL21EPA6NDL7 271 aa14.1□□□□□ -0.15
HDAC6-235ENST00000495515 M0R1W7 72 aa14.1□□□□□ -0.15
HDAC6-235ENST00000495515 LDLRAD4O15165 306 aa14.1□□□□□ -0.15
HDAC6-235ENST00000495515 TOX4O94842 621 aa14.1□□□□□ -0.15
HDAC6-235ENST00000495515 SLC2A2P11168 524 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-235ENST00000495515 RAB6AP20340 208 aa14.1□□□□□ -0.15
HDAC6-235ENST00000495515 RPS19P39019 145 aaKnown RBP14.1□□□□□ -0.15
HDAC6-235ENST00000495515 SCAND1P57086 179 aa14.1□□□□□ -0.15
HDAC6-235ENST00000495515 PAX5Q02548 391 aa14.1□□□□□ -0.15
HDAC6-235ENST00000495515 AESQ08117 197 aa14.1□□□□□ -0.15
HDAC6-235ENST00000495515 SCGB2A2Q13296 93 aa14.1□□□□□ -0.15
HDAC6-235ENST00000495515 IDNKQ5T6J7 187 aa14.1□□□□□ -0.15
HDAC6-235ENST00000495515 TMEM200BQ69YZ2 307 aa14.1□□□□□ -0.15
HDAC6-235ENST00000495515 CLVS1Q8IUQ0 354 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-235ENST00000495515 BPIFB2Q8N4F0 458 aa14.1□□□□□ -0.15
HDAC6-235ENST00000495515 OR56B1Q8NGI3 324 aa14.1□□□□□ -0.15
HDAC6-235ENST00000495515 NANPQ8TBE9 248 aa14.1□□□□□ -0.15
HDAC6-235ENST00000495515 RAB2BQ8WUD1 216 aa14.1□□□□□ -0.15
HDAC6-235ENST00000495515 WDFY2Q96P53 400 aa14.1□□□□□ -0.15
HDAC6-235ENST00000495515 BCL7BQ9BQE9 202 aa14.1□□□□□ -0.15
HDAC6-235ENST00000495515 LPAR5Q9H1C0 372 aa14.1□□□□□ -0.15
HDAC6-235ENST00000495515 KCNK15Q9H427 330 aa14.1□□□□□ -0.15
HDAC6-235ENST00000495515 NCOR1P1Q9H4R4 102 aa14.1□□□□□ -0.15
HDAC6-235ENST00000495515 OR6C3Q9NZP0 311 aa14.1□□□□□ -0.15
HDAC6-235ENST00000495515 LINC00312Q9Y6C7 94 aa14.1□□□□□ -0.15
HDAC6-235ENST00000495515 ODAMA1E959 279 aa14.09□□□□□ -0.15
HDAC6-235ENST00000495515 CA11O75493 328 aa14.09□□□□□ -0.15
HDAC6-235ENST00000495515 BLVRBP30043 206 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-235ENST00000495515 TGFBR1P36897 503 aa14.09□□□□□ -0.15
HDAC6-235ENST00000495515 TMBIM6P55061 237 aa14.09□□□□□ -0.15
HDAC6-235ENST00000495515 CTF1Q16619 201 aa14.09□□□□□ -0.15
HDAC6-235ENST00000495515 NKAPLQ5M9Q1 402 aa14.09□□□□□ -0.15
HDAC6-235ENST00000495515 USP43Q70EL4 1123 aa14.09□□□□□ -0.15
HDAC6-235ENST00000495515 TRAPPC6BQ86SZ2 158 aa14.09□□□□□ -0.15
HDAC6-235ENST00000495515 UPRTQ96BW1 309 aa14.09□□□□□ -0.15
HDAC6-235ENST00000495515 PCGF1Q9BSM1 259 aa14.09□□□□□ -0.15
HDAC6-235ENST00000495515 NAA50Q9GZZ1 169 aaKnown RBP14.09□□□□□ -0.15
HDAC6-235ENST00000495515 ING3Q9NXR8 418 aa14.09□□□□□ -0.15
HDAC6-235ENST00000495515 ABRACLQ9P1F3 81 aa14.09□□□□□ -0.15
HDAC6-235ENST00000495515 OPN4Q9UHM6 478 aa14.09□□□□□ -0.15
HDAC6-235ENST00000495515 UBE2J1Q9Y385 318 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-235ENST00000495515 ETV7Q9Y603 341 aa14.09□□□□□ -0.15
HDAC6-235ENST00000495515 MEIKINA0A087WXM9 373 aa14.08□□□□□ -0.16
HDAC6-235ENST00000495515 TMEM30CPA0ZSE6 113 aa14.08□□□□□ -0.16
HDAC6-235ENST00000495515 ZNF728P0DKX0 622 aa14.08□□□□□ -0.16
HDAC6-235ENST00000495515 GLIPR1P48060 266 aa14.08□□□□□ -0.16
HDAC6-235ENST00000495515 SLC35E4Q6ICL7 350 aa14.08□□□□□ -0.16
HDAC6-235ENST00000495515 FAM89BQ8N5H3 189 aa14.08□□□□□ -0.16
HDAC6-235ENST00000495515 TPRX1Q8N7U7 411 aa14.08□□□□□ -0.16
HDAC6-235ENST00000495515 ZNF565Q8N9K5 539 aa14.08□□□□□ -0.16
HDAC6-235ENST00000495515 SLC25A46Q96AG3 418 aa14.08□□□□□ -0.16
HDAC6-235ENST00000495515 COQ2Q96H96 371 aa14.08□□□□□ -0.16
HDAC6-235ENST00000495515 ZNF714Q96N38 554 aa14.08□□□□□ -0.16
HDAC6-235ENST00000495515 NICN1Q9BSH3 213 aa14.08□□□□□ -0.16
HDAC6-235ENST00000495515 SIRPDQ9H106 197 aa14.08□□□□□ -0.16
HDAC6-235ENST00000495515 GAL3ST2Q9H3Q3 398 aa14.08□□□□□ -0.16
HDAC6-235ENST00000495515 METTL8Q9H825 291 aaKnown RBP14.08□□□□□ -0.16
HDAC6-235ENST00000495515 PLEKHJ1Q9NW61 149 aa14.08□□□□□ -0.16
HDAC6-235ENST00000495515 ETAA1Q9NY74 926 aa14.08□□□□□ -0.16
HDAC6-235ENST00000495515 ZNF581Q9P0T4 197 aa14.08□□□□□ -0.16
HDAC6-235ENST00000495515 DOCK11Q5JSL3 2073 aa14.07□□□□□ -0.16
HDAC6-235ENST00000495515 A0A0B4J203 849 aa14.07□□□□□ -0.16
HDAC6-235ENST00000495515 CRLF1O75462 422 aa14.07□□□□□ -0.16
HDAC6-235ENST00000495515 SCGNO76038 276 aa14.07□□□□□ -0.16
HDAC6-235ENST00000495515 AVPP01185 164 aa14.07□□□□□ -0.16
HDAC6-235ENST00000495515 RBP4P02753 201 aa14.07□□□□□ -0.16
HDAC6-235ENST00000495515 MMP9P14780 707 aa14.07□□□□□ -0.16
HDAC6-235ENST00000495515 SRD5A1P18405 259 aa14.07□□□□□ -0.16
HDAC6-235ENST00000495515 CHATP28329 748 aa14.07□□□□□ -0.16
HDAC6-235ENST00000495515 VEGFCP49767 419 aa14.07□□□□□ -0.16
HDAC6-235ENST00000495515 ZNF273Q14593 569 aa14.07□□□□□ -0.16
HDAC6-235ENST00000495515 KRTAP21-3Q3LHN1 58 aa14.07□□□□□ -0.16
HDAC6-235ENST00000495515 RSBN1Q5VWQ0 802 aaPredicted RBP14.07□□□□□ -0.16
HDAC6-235ENST00000495515 SIGIRRQ6IA17 410 aa14.07□□□□□ -0.16
HDAC6-235ENST00000495515 BRICD5Q6PL45 260 aa14.07□□□□□ -0.16
HDAC6-235ENST00000495515 CORO2AQ92828 525 aa14.07□□□□□ -0.16
HDAC6-235ENST00000495515 KCTD12Q96CX2 325 aaKnown RBP14.07□□□□□ -0.16
HDAC6-235ENST00000495515 DCSTAMPQ9H295 470 aa14.07□□□□□ -0.16
HDAC6-235ENST00000495515 TAS2R3Q9NYW6 316 aa14.07□□□□□ -0.16
HDAC6-235ENST00000495515 KIF25Q9UIL4 384 aa14.07□□□□□ -0.16
HDAC6-235ENST00000495515 SNRPBP14678 240 aaKnown RBP14.06□□□□□ -0.16
HDAC6-235ENST00000495515 PRTN3P24158 256 aa14.06□□□□□ -0.16
HDAC6-235ENST00000495515 RORCP51449 518 aa14.06□□□□□ -0.16
HDAC6-235ENST00000495515 ARL6IP1Q15041 203 aa14.06□□□□□ -0.16
HDAC6-235ENST00000495515 GPR157Q5UAW9 335 aa14.06□□□□□ -0.16
HDAC6-235ENST00000495515 NCR3LG1Q68D85 454 aa14.06□□□□□ -0.16
HDAC6-235ENST00000495515 METAP1DQ6UB28 335 aaPredicted RBP14.06□□□□□ -0.16
HDAC6-235ENST00000495515 C1orf229Q6ZS94 237 aaPredicted RBP14.06□□□□□ -0.16
HDAC6-235ENST00000495515 IL17RELQ6ZVW7 336 aa14.06□□□□□ -0.16
HDAC6-235ENST00000495515 VMO1Q7Z5L0 202 aa14.06□□□□□ -0.16
HDAC6-235ENST00000495515 PLPPR1Q8TBJ4 325 aa14.06□□□□□ -0.16
HDAC6-235ENST00000495515 LGALS14Q8TCE9 139 aa14.06□□□□□ -0.16
HDAC6-235ENST00000495515 PHF21AQ96BD5 680 aa14.06□□□□□ -0.16
HDAC6-235ENST00000495515 ATG5Q9H1Y0 275 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms