RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 LSM3P62310 102 aaKnown RBP15.93■□□□□ 0.14
HDAC4-212ENST00000495497 MXD1Q05195 221 aa15.93■□□□□ 0.14
HDAC4-212ENST00000495497 MEF2CQ06413 473 aaPredicted RBP15.93■□□□□ 0.14
HDAC4-212ENST00000495497 BLMHQ13867 455 aa15.93■□□□□ 0.14
HDAC4-212ENST00000495497 C2orf76Q3KRA6 126 aa15.93■□□□□ 0.14
HDAC4-212ENST00000495497 KCNG3Q8TAE7 436 aa15.93■□□□□ 0.14
HDAC4-212ENST00000495497 FAM3DQ96BQ1 224 aa15.93■□□□□ 0.14
HDAC4-212ENST00000495497 SLC6A7Q99884 636 aa15.93■□□□□ 0.14
HDAC4-212ENST00000495497 NICN1Q9BSH3 213 aa15.93■□□□□ 0.14
HDAC4-212ENST00000495497 TMEM59Q9BXS4 323 aa15.93■□□□□ 0.14
HDAC4-212ENST00000495497 MRPS26Q9BYN8 205 aaKnown RBP15.93■□□□□ 0.14
HDAC4-212ENST00000495497 OCEL1Q9H607 264 aa15.93■□□□□ 0.14
HDAC4-212ENST00000495497 A0A1W2PPH5 198 aa15.92■□□□□ 0.14
HDAC4-212ENST00000495497 IFITM5A6NNB3 132 aa15.92■□□□□ 0.14
HDAC4-212ENST00000495497 RNASEK-C17orf49H0YIS7 233 aa15.92■□□□□ 0.14
HDAC4-212ENST00000495497 RPS27AP62979 156 aaKnown RBP15.92■□□□□ 0.14
HDAC4-212ENST00000495497 GPR157Q5UAW9 335 aa15.92■□□□□ 0.14
HDAC4-212ENST00000495497 SIGIRRQ6IA17 410 aa15.92■□□□□ 0.14
HDAC4-212ENST00000495497 ZNF782Q6ZMW2 699 aaPredicted RBP15.92■□□□□ 0.14
HDAC4-212ENST00000495497 C1orf122Q6ZSJ8 110 aa15.92■□□□□ 0.14
HDAC4-212ENST00000495497 TRAPPC6BQ86SZ2 158 aa15.92■□□□□ 0.14
HDAC4-212ENST00000495497 OR13F1Q8NGS4 319 aa15.92■□□□□ 0.14
HDAC4-212ENST00000495497 TNFRSF14Q92956 283 aa15.92■□□□□ 0.14
HDAC4-212ENST00000495497 ZNF714Q96N38 554 aa15.92■□□□□ 0.14
HDAC4-212ENST00000495497 MS4A7Q9GZW8 240 aaPredicted RBP15.92■□□□□ 0.14
HDAC4-212ENST00000495497 METTL8Q9H825 291 aaKnown RBP15.92■□□□□ 0.14
HDAC4-212ENST00000495497 KIF25Q9UIL4 384 aa15.92■□□□□ 0.14
HDAC4-212ENST00000495497 LINC00312Q9Y6C7 94 aa15.92■□□□□ 0.14
HDAC4-212ENST00000495497 A0A0A6YYD4 124 aa15.91■□□□□ 0.14
HDAC4-212ENST00000495497 TRAV39A0A0B4J263 110 aa15.91■□□□□ 0.14
HDAC4-212ENST00000495497 ODAMA1E959 279 aa15.91■□□□□ 0.14
HDAC4-212ENST00000495497 FUOMA2VDF0 154 aa15.91■□□□□ 0.14
HDAC4-212ENST00000495497 C17orf98A8MV24 154 aa15.91■□□□□ 0.14
HDAC4-212ENST00000495497 AIREO43918 545 aa15.91■□□□□ 0.14
HDAC4-212ENST00000495497 ZNF728P0DKX0 622 aa15.91■□□□□ 0.14
HDAC4-212ENST00000495497 PRTN3P24158 256 aa15.91■□□□□ 0.14
HDAC4-212ENST00000495497 SRSF2Q01130 221 aaKnown RBP15.91■□□□□ 0.14
HDAC4-212ENST00000495497 RSBN1Q5VWQ0 802 aaPredicted RBP15.91■□□□□ 0.14
HDAC4-212ENST00000495497 RAB12Q6IQ22 244 aa15.91■□□□□ 0.14
HDAC4-212ENST00000495497 HCP5Q6MZN7 132 aa15.91■□□□□ 0.14
HDAC4-212ENST00000495497 RTN4RL2Q86UN3 420 aa15.91■□□□□ 0.14
HDAC4-212ENST00000495497 PNKDQ8N490 385 aa15.91■□□□□ 0.14
HDAC4-212ENST00000495497 NEK7Q8TDX7 302 aa15.91■□□□□ 0.14
HDAC4-212ENST00000495497 FUNDC2Q9BWH2 189 aa15.91■□□□□ 0.14
HDAC4-212ENST00000495497 RCC2Q9P258 522 aaKnown RBP15.91■□□□□ 0.14
HDAC4-212ENST00000495497 PEX16Q9Y5Y5 336 aa15.91■□□□□ 0.14
HDAC4-212ENST00000495497 MEIKINA0A087WXM9 373 aa15.9■□□□□ 0.14
HDAC4-212ENST00000495497 IGHV1-69DA0A0B4J2H0 117 aa15.9■□□□□ 0.14
HDAC4-212ENST00000495497 TMEM272A0A1B0GTI8 110 aa15.9■□□□□ 0.14
HDAC4-212ENST00000495497 UBE2QL1A1L167 161 aa15.9■□□□□ 0.14
HDAC4-212ENST00000495497 LDLRAD4O15165 306 aa15.9■□□□□ 0.14
HDAC4-212ENST00000495497 IGHV1-69P01742 117 aa15.9■□□□□ 0.14
HDAC4-212ENST00000495497 TIMM50Q3ZCQ8 353 aa15.9■□□□□ 0.14
HDAC4-212ENST00000495497 NKAPLQ5M9Q1 402 aa15.9■□□□□ 0.14
HDAC4-212ENST00000495497 OR2W3Q7Z3T1 314 aa15.9■□□□□ 0.14
HDAC4-212ENST00000495497 TPRA1Q86W33 373 aa15.9■□□□□ 0.14
HDAC4-212ENST00000495497 DYRK2Q92630 601 aa15.9■□□□□ 0.14
HDAC4-212ENST00000495497 TM2D1Q9BX74 207 aa15.9■□□□□ 0.14
HDAC4-212ENST00000495497 BARHL1Q9BZE3 327 aa15.9■□□□□ 0.14
HDAC4-212ENST00000495497 LPAR5Q9H1C0 372 aa15.9■□□□□ 0.14
HDAC4-212ENST00000495497 MXRA5Q9NR99 2828 aa15.9■□□□□ 0.14
HDAC4-212ENST00000495497 TRGV10A0A0A0MS01 117 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 MDFIC2A0A1B0GVS7 189 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 FAM90A10PA6NDY2 464 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 FAM90A18PA6NE21 464 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 FAM90A16PA6NEW6 464 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 FAM90A20PA6NIJ5 464 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 FAM90A8PA6NJQ4 464 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 FAM90A7PA6NKC0 464 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 NOTOA8MTQ0 251 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 FAM90A22PA8MWA6 464 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 FAM90A12PA8MX19 464 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 FAM90A5PA8MXJ8 464 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 FAM90A23PA8MXZ1 464 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 MCRIP1C9JLW8 97 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 AIPO00170 330 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 MMP23AO75900 390 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 IFNA2P01563 188 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 TFAP2AP05549 437 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 FAM90A15PP0C7V4 464 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 FAM90A13PP0C7W8 464 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 FAM90A14PP0C7W9 464 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 FAM90A24PP0C7X0 464 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 FUT3P21217 361 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 FPR2P25090 351 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 EFNB2P52799 333 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 GDPGP1Q6ZNW5 385 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 OR13A1Q8NGR1 328 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 CORO2AQ92828 525 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 ZNF48Q96MX3 618 aaPredicted RBP15.89■□□□□ 0.13
HDAC4-212ENST00000495497 UNKLQ9H9P5 680 aaKnown RBP15.89■□□□□ 0.13
HDAC4-212ENST00000495497 LIN7BQ9HAP6 207 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 SPACA1Q9HBV2 294 aa15.89■□□□□ 0.13
HDAC4-212ENST00000495497 UBE2J1Q9Y385 318 aaPredicted RBP15.89■□□□□ 0.13
HDAC4-212ENST00000495497 SOCS1O15524 211 aa15.88■□□□□ 0.13
HDAC4-212ENST00000495497 PDCD6O75340 191 aa15.88■□□□□ 0.13
HDAC4-212ENST00000495497 COX7A1P24310 79 aa15.88■□□□□ 0.13
HDAC4-212ENST00000495497 GDNFP39905 211 aa15.88■□□□□ 0.13
HDAC4-212ENST00000495497 GLP1RP43220 463 aa15.88■□□□□ 0.13
HDAC4-212ENST00000495497 KCNJ3P48549 501 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms