RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 SIGIRRQ6IA17 410 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 MZT2AQ6P582 158 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 FAM89BQ8N5H3 189 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 OR4M2Q8NGB6 313 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 MMP26Q9NRE1 261 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 PLEKHJ1Q9NW61 149 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 RHBDL2Q9NX52 303 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 COMMD3Q9UBI1 195 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 KCNS2Q9ULS6 477 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 ARHGAP32A7KAX9 2087 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 HIVEP1P15822 2718 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 ABCA1O95477 2261 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 ZANQ9Y493 2812 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 UBE2QL1A1L167 161 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 SCGNO76038 276 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 GLAP06280 429 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 LIPFP07098 398 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 GATA3P23771 443 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 CHATP28329 748 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 ERP29P30040 261 aaKnown RBP12.04□□□□□ -0.48
BRCA1-223ENST00000494123 FAHD2BQ6P2I3 314 aaPredicted RBP12.04□□□□□ -0.48
BRCA1-223ENST00000494123 CLEC9AQ6UXN8 241 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 Q6ZTK2 550 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 C6orf201Q7Z4U5 140 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 TRAPPC6BQ86SZ2 158 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 TPRX1Q8N7U7 411 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 SAMD12Q8N8I0 201 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 DYNC2LI1Q8TCX1 351 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 DGCR14Q96DF8 476 aaKnown RBP12.04□□□□□ -0.48
BRCA1-223ENST00000494123 FAHD2AQ96GK7 314 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 YAE1D1Q9NRH1 226 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 C19orf12Q9NSK7 152 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 ETAA1Q9NY74 926 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 CCDC59Q9P031 241 aaKnown RBP12.04□□□□□ -0.48
BRCA1-223ENST00000494123 LPAR3Q9UBY5 353 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 INSIG2Q9Y5U4 225 aa12.04□□□□□ -0.48
BRCA1-223ENST00000494123 ZNF469Q96JG9 3925 aaPredicted RBP12.03□□□□□ -0.48
BRCA1-223ENST00000494123 KIR2DS1A0A191URI9 304 aa12.03□□□□□ -0.48
BRCA1-223ENST00000494123 A0A1W2PPH5 198 aa12.03□□□□□ -0.48
BRCA1-223ENST00000494123 hADV38S2A0JD32 116 aa12.03□□□□□ -0.48
BRCA1-223ENST00000494123 LY6G6DO95868 133 aa12.03□□□□□ -0.48
BRCA1-223ENST00000494123 PAX2Q02962 417 aa12.03□□□□□ -0.48
BRCA1-223ENST00000494123 KRTAP1-1Q07627 177 aa12.03□□□□□ -0.48
BRCA1-223ENST00000494123 DYNC1I2Q13409 638 aaKnown RBP12.03□□□□□ -0.48
BRCA1-223ENST00000494123 UBE2NLQ5JXB2 153 aa12.03□□□□□ -0.48
BRCA1-223ENST00000494123 OR10R2Q8NGX6 335 aa12.03□□□□□ -0.48
BRCA1-223ENST00000494123 C8orf46Q8TAG6 207 aa12.03□□□□□ -0.48
BRCA1-223ENST00000494123 PLPPR1Q8TBJ4 325 aa12.03□□□□□ -0.48
BRCA1-223ENST00000494123 RAB3CQ96E17 227 aa12.03□□□□□ -0.48
BRCA1-223ENST00000494123 COQ2Q96H96 371 aa12.03□□□□□ -0.48
BRCA1-223ENST00000494123 ONECUT1Q9UBC0 465 aa12.03□□□□□ -0.48
BRCA1-223ENST00000494123 A0A075B6Q4 140 aa12.02□□□□□ -0.49
BRCA1-223ENST00000494123 MEIKINA0A087WXM9 373 aa12.02□□□□□ -0.49
BRCA1-223ENST00000494123 TMEM30CPA0ZSE6 113 aa12.02□□□□□ -0.49
BRCA1-223ENST00000494123 GLIPR1P48060 266 aa12.02□□□□□ -0.49
BRCA1-223ENST00000494123 MEF2CQ06413 473 aaPredicted RBP12.02□□□□□ -0.49
BRCA1-223ENST00000494123 MOGAT2Q3SYC2 334 aa12.02□□□□□ -0.49
BRCA1-223ENST00000494123 CMTM4Q8IZR5 234 aa12.02□□□□□ -0.49
BRCA1-223ENST00000494123 SLC25A38Q96DW6 304 aa12.02□□□□□ -0.49
BRCA1-223ENST00000494123 ARHGAP5-AS1Q96IT6 56 aa12.02□□□□□ -0.49
BRCA1-223ENST00000494123 SULT4A1Q9BR01 284 aa12.02□□□□□ -0.49
BRCA1-223ENST00000494123 DCUN1D5Q9BTE7 237 aa12.02□□□□□ -0.49
BRCA1-223ENST00000494123 FAAP24Q9BTP7 215 aa12.02□□□□□ -0.49
BRCA1-223ENST00000494123 C7orf69Q9H7B7 122 aa12.02□□□□□ -0.49
BRCA1-223ENST00000494123 KIF25Q9UIL4 384 aa12.02□□□□□ -0.49
BRCA1-223ENST00000494123 HSF4Q9ULV5 492 aa12.02□□□□□ -0.49
BRCA1-223ENST00000494123 F8P00451 2351 aa12.01□□□□□ -0.49
BRCA1-223ENST00000494123 TRGV10A0A0A0MS01 117 aa12.01□□□□□ -0.49
BRCA1-223ENST00000494123 ODAMA1E959 279 aa12.01□□□□□ -0.49
BRCA1-223ENST00000494123 MEX3AA1L020 520 aaKnown RBP12.01□□□□□ -0.49
BRCA1-223ENST00000494123 FOXI3A8MTJ6 420 aaPredicted RBP12.01□□□□□ -0.49
BRCA1-223ENST00000494123 J3QLI3 93 aa12.01□□□□□ -0.49
BRCA1-223ENST00000494123 RAB27BO00194 218 aa12.01□□□□□ -0.49
BRCA1-223ENST00000494123 TMEM50BP56557 158 aa12.01□□□□□ -0.49
BRCA1-223ENST00000494123 RSBN1Q5VWQ0 802 aaPredicted RBP12.01□□□□□ -0.49
BRCA1-223ENST00000494123 TMEM200BQ69YZ2 307 aa12.01□□□□□ -0.49
BRCA1-223ENST00000494123 SLC35E4Q6ICL7 350 aa12.01□□□□□ -0.49
BRCA1-223ENST00000494123 LY6G5BQ8NDX9 201 aa12.01□□□□□ -0.49
BRCA1-223ENST00000494123 DYRK2Q92630 601 aa12.01□□□□□ -0.49
BRCA1-223ENST00000494123 DACT3Q96B18 629 aaPredicted RBP12.01□□□□□ -0.49
BRCA1-223ENST00000494123 S100A16Q96FQ6 103 aaKnown RBP12.01□□□□□ -0.49
BRCA1-223ENST00000494123 DMRTB1Q96MA1 342 aa12.01□□□□□ -0.49
BRCA1-223ENST00000494123 PECRQ9BY49 303 aa12.01□□□□□ -0.49
BRCA1-223ENST00000494123 DIABLOQ9NR28 239 aa12.01□□□□□ -0.49
BRCA1-223ENST00000494123 LINC00312Q9Y6C7 94 aa12.01□□□□□ -0.49
BRCA1-223ENST00000494123 WNK2Q9Y3S1 2297 aa12.01□□□□□ -0.49
BRCA1-223ENST00000494123 CSPG4Q6UVK1 2322 aa12.01□□□□□ -0.49
BRCA1-223ENST00000494123 A8MV72 311 aaPredicted RBP12□□□□□ -0.49
BRCA1-223ENST00000494123 CA11O75493 328 aa12□□□□□ -0.49
BRCA1-223ENST00000494123 ARF6P62330 175 aa12□□□□□ -0.49
BRCA1-223ENST00000494123 MRPS15P82914 257 aaKnown RBP12□□□□□ -0.49
BRCA1-223ENST00000494123 PAX5Q02548 391 aa12□□□□□ -0.49
BRCA1-223ENST00000494123 ZNF273Q14593 569 aa12□□□□□ -0.49
BRCA1-223ENST00000494123 ARL6IP1Q15041 203 aa12□□□□□ -0.49
BRCA1-223ENST00000494123 PLAC9Q5JTB6 97 aa12□□□□□ -0.49
BRCA1-223ENST00000494123 METTL11BQ5VVY1 283 aa12□□□□□ -0.49
BRCA1-223ENST00000494123 ZNF497Q6ZNH5 498 aa12□□□□□ -0.49
BRCA1-223ENST00000494123 CMTM3Q96MX0 182 aa12□□□□□ -0.49
BRCA1-223ENST00000494123 ABCG5Q9H222 651 aa12□□□□□ -0.49
BRCA1-223ENST00000494123 GSX1Q9H4S2 264 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms