RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 MMP23AO75900 390 aa12.2□□□□□ -0.46
USP39-217ENST00000491659 CDRT1O95170 752 aa12.2□□□□□ -0.46
USP39-217ENST00000491659 IGFBP3P17936 291 aaPredicted RBP12.2□□□□□ -0.46
USP39-217ENST00000491659 CELP19835 753 aa12.2□□□□□ -0.46
USP39-217ENST00000491659 SERPINA2P20848 420 aa12.2□□□□□ -0.46
USP39-217ENST00000491659 GLP1RP43220 463 aa12.2□□□□□ -0.46
USP39-217ENST00000491659 KCNJ3P48549 501 aa12.2□□□□□ -0.46
USP39-217ENST00000491659 PIGYQ3MUY2 71 aa12.2□□□□□ -0.46
USP39-217ENST00000491659 SLC35E4Q6ICL7 350 aa12.2□□□□□ -0.46
USP39-217ENST00000491659 TREML4Q6UXN2 200 aa12.2□□□□□ -0.46
USP39-217ENST00000491659 ASCL4Q6XD76 172 aa12.2□□□□□ -0.46
USP39-217ENST00000491659 RTN4RL2Q86UN3 420 aa12.2□□□□□ -0.46
USP39-217ENST00000491659 OSR2Q8N2R0 312 aa12.2□□□□□ -0.46
USP39-217ENST00000491659 DTX3Q8N9I9 347 aa12.2□□□□□ -0.46
USP39-217ENST00000491659 Q8NFD4 153 aa12.2□□□□□ -0.46
USP39-217ENST00000491659 ZNF596Q8TC21 504 aa12.2□□□□□ -0.46
USP39-217ENST00000491659 BARHL1Q9BZE3 327 aa12.2□□□□□ -0.46
USP39-217ENST00000491659 PCDHB16Q9NRJ7 776 aa12.2□□□□□ -0.46
USP39-217ENST00000491659 FKBP14Q9NWM8 211 aa12.2□□□□□ -0.46
USP39-217ENST00000491659 FBLN5Q9UBX5 448 aa12.2□□□□□ -0.46
USP39-217ENST00000491659 PITPNC1Q9UKF7 332 aa12.2□□□□□ -0.46
USP39-217ENST00000491659 HILPDAQ9Y5L2 63 aa12.2□□□□□ -0.46
USP39-217ENST00000491659 KIAA2026Q5HYC2 2103 aa12.19□□□□□ -0.46
USP39-217ENST00000491659 MEIKINA0A087WXM9 373 aa12.19□□□□□ -0.46
USP39-217ENST00000491659 TRAV24A0A0B4J272 114 aa12.19□□□□□ -0.46
USP39-217ENST00000491659 FAM172BPA6NC97 362 aa12.19□□□□□ -0.46
USP39-217ENST00000491659 M0QZ24 198 aa12.19□□□□□ -0.46
USP39-217ENST00000491659 CHST1O43916 411 aa12.19□□□□□ -0.46
USP39-217ENST00000491659 GPX5O75715 221 aa12.19□□□□□ -0.46
USP39-217ENST00000491659 MAPK3P27361 379 aaPredicted RBP12.19□□□□□ -0.46
USP39-217ENST00000491659 HTR1DP28221 377 aa12.19□□□□□ -0.46
USP39-217ENST00000491659 AQP4P55087 323 aa12.19□□□□□ -0.46
USP39-217ENST00000491659 RBM11P57052 281 aaKnown RBP12.19□□□□□ -0.46
USP39-217ENST00000491659 RPS11P62280 158 aaKnown RBP eCLIP12.19□□□□□ -0.46
USP39-217ENST00000491659 NHLRC3Q5JS37 347 aa12.19□□□□□ -0.46
USP39-217ENST00000491659 LDLRAD2Q5SZI1 272 aa12.19□□□□□ -0.46
USP39-217ENST00000491659 LINC00596Q86U02 117 aa12.19□□□□□ -0.46
USP39-217ENST00000491659 ABHD12Q8N2K0 398 aa12.19□□□□□ -0.46
USP39-217ENST00000491659 NANOGP1Q8N7R0 232 aa12.19□□□□□ -0.46
USP39-217ENST00000491659 OR4P4Q8NGL7 312 aa12.19□□□□□ -0.46
USP39-217ENST00000491659 OR2T6Q8NHC8 308 aa12.19□□□□□ -0.46
USP39-217ENST00000491659 PIFOQ8TCI5 191 aa12.19□□□□□ -0.46
USP39-217ENST00000491659 MYDGFQ969H8 173 aa12.19□□□□□ -0.46
USP39-217ENST00000491659 MND1Q9BWT6 205 aa12.19□□□□□ -0.46
USP39-217ENST00000491659 CDCA4Q9BXL8 241 aa12.19□□□□□ -0.46
USP39-217ENST00000491659 TCF7L1Q9HCS4 588 aa12.19□□□□□ -0.46
USP39-217ENST00000491659 SCN3BQ9NY72 215 aa12.19□□□□□ -0.46
USP39-217ENST00000491659 FOXJ3Q9UPW0 622 aa12.19□□□□□ -0.46
USP39-217ENST00000491659 ST3GAL6Q9Y274 331 aa12.19□□□□□ -0.46
USP39-217ENST00000491659 TRAV8-7A0A075B6U6 113 aa12.18□□□□□ -0.46
USP39-217ENST00000491659 TRBV5-7A0A0A0MS05 114 aa12.18□□□□□ -0.46
USP39-217ENST00000491659 A0A1W2PPK0 400 aa12.18□□□□□ -0.46
USP39-217ENST00000491659 MAGEA13PA6NCF6 341 aa12.18□□□□□ -0.46
USP39-217ENST00000491659 TOR1AO14656 332 aa12.18□□□□□ -0.46
USP39-217ENST00000491659 OR7C1O76099 320 aaPredicted RBP12.18□□□□□ -0.46
USP39-217ENST00000491659 CD1AP06126 327 aa12.18□□□□□ -0.46
USP39-217ENST00000491659 CDK1P06493 297 aa12.18□□□□□ -0.46
USP39-217ENST00000491659 RAB13P51153 203 aa12.18□□□□□ -0.46
USP39-217ENST00000491659 DYNLT3P51808 116 aa12.18□□□□□ -0.46
USP39-217ENST00000491659 ARHGDIBP52566 201 aa12.18□□□□□ -0.46
USP39-217ENST00000491659 KRTAP10-3P60369 221 aa12.18□□□□□ -0.46
USP39-217ENST00000491659 BDH1Q02338 343 aa12.18□□□□□ -0.46
USP39-217ENST00000491659 C6orf141Q5SZD1 244 aa12.18□□□□□ -0.46
USP39-217ENST00000491659 C11orf88Q6PI97 169 aa12.18□□□□□ -0.46
USP39-217ENST00000491659 JAGN1Q8N5M9 183 aa12.18□□□□□ -0.46
USP39-217ENST00000491659 ZNF565Q8N9K5 539 aa12.18□□□□□ -0.46
USP39-217ENST00000491659 NRG4Q8WWG1 115 aa12.18□□□□□ -0.46
USP39-217ENST00000491659 DERL3Q96Q80 235 aa12.18□□□□□ -0.46
USP39-217ENST00000491659 DPCDQ9BVM2 203 aaPredicted RBP12.18□□□□□ -0.46
USP39-217ENST00000491659 VCX3BQ9H321 246 aa12.18□□□□□ -0.46
USP39-217ENST00000491659 NCOR1P1Q9H4R4 102 aa12.18□□□□□ -0.46
USP39-217ENST00000491659 KIF25Q9UIL4 384 aa12.18□□□□□ -0.46
USP39-217ENST00000491659 KBTBD11-OT1A0A1B0GTJ5 212 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 PTGES3LE9PB15 166 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 H3BUI4 141 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 MAS1P04201 325 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 GTF2F2P13984 249 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 NFYBP25208 207 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 CD34P28906 385 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 GDNFP39905 211 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 CEACAM3P40198 252 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 KIR2DS4P43632 304 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 PAX5Q02548 391 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 DOC2BQ14184 412 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 GPR176Q14439 515 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 C17orf58Q2M2W7 97 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 MPV17LQ2QL34 196 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 SLC22A6Q4U2R8 563 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 RSBN1Q5VWQ0 802 aaPredicted RBP12.17□□□□□ -0.46
USP39-217ENST00000491659 RNLSQ5VYX0 342 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 AWAT2Q6E213 333 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 BAIAP2L2Q6UXY1 529 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 NKAIN3Q8N8D7 197 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 SUMF2Q8NBJ7 301 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 OR13A1Q8NGR1 328 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 PLPPR1Q8TBJ4 325 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 MUL1Q969V5 352 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 CREB3L1Q96BA8 519 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 IFT22Q9H7X7 185 aa12.17□□□□□ -0.46
USP39-217ENST00000491659 ZNF286AQ9HBT8 521 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms