RNA–Protein interactions for RNA: ENST00000491139.5

NELFE-210, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-210ENST00000491139 ADGRL4Q9HBW9 690 aa16.37■□□□□ 0.21
NELFE-210ENST00000491139 ING3Q9NXR8 418 aa16.37■□□□□ 0.21
NELFE-210ENST00000491139 H2AFY2Q9P0M6 372 aaPredicted RBP16.37■□□□□ 0.21
NELFE-210ENST00000491139 SCOCQ9UIL1 159 aa16.37■□□□□ 0.21
NELFE-210ENST00000491139 ZNF256Q9Y2P7 627 aaPredicted RBP16.37■□□□□ 0.21
NELFE-210ENST00000491139 ZNF729A6NN14 1252 aaPredicted RBP16.36■□□□□ 0.21
NELFE-210ENST00000491139 RPLP1P05386 114 aaKnown RBP16.36■□□□□ 0.21
NELFE-210ENST00000491139 KRT8P05787 483 aa16.36■□□□□ 0.21
NELFE-210ENST00000491139 LYL1P12980 280 aa16.36■□□□□ 0.21
NELFE-210ENST00000491139 KIR2DS1Q14954 304 aa16.36■□□□□ 0.21
NELFE-210ENST00000491139 PNLIPRP3Q17RR3 467 aa16.36■□□□□ 0.21
NELFE-210ENST00000491139 KRBOX4Q5JUW0 171 aa16.36■□□□□ 0.21
NELFE-210ENST00000491139 LCNL1Q6ZST4 164 aa16.36■□□□□ 0.21
NELFE-210ENST00000491139 CATSPERDQ86XM0 798 aa16.36■□□□□ 0.21
NELFE-210ENST00000491139 PP6455Q8WZ26 134 aa16.36■□□□□ 0.21
NELFE-210ENST00000491139 C10orf35Q96D05 121 aa16.36■□□□□ 0.21
NELFE-210ENST00000491139 RCHY1Q96PM5 261 aa16.36■□□□□ 0.21
NELFE-210ENST00000491139 ORC6Q9Y5N6 252 aa16.36■□□□□ 0.21
NELFE-210ENST00000491139 SMAD5-AS1Q9Y6J3 95 aa16.36■□□□□ 0.21
NELFE-210ENST00000491139 BIRC6Q9NR09 4857 aa16.36■□□□□ 0.21
NELFE-210ENST00000491139 SACSQ9NZJ4 4579 aa16.35■□□□□ 0.21
NELFE-210ENST00000491139 LCE6AA0A183 80 aa16.35■□□□□ 0.21
NELFE-210ENST00000491139 A0A1W2PPI3 338 aa16.35■□□□□ 0.21
NELFE-210ENST00000491139 CSN2P05814 226 aa16.35■□□□□ 0.21
NELFE-210ENST00000491139 ZNF44P15621 663 aa16.35■□□□□ 0.21
NELFE-210ENST00000491139 ZSCAN26Q16670 478 aa16.35■□□□□ 0.21
NELFE-210ENST00000491139 C17orf58Q2M2W7 97 aa16.35■□□□□ 0.21
NELFE-210ENST00000491139 CXorf66Q5JRM2 361 aaPredicted RBP16.35■□□□□ 0.21
NELFE-210ENST00000491139 BCDIN3DQ7Z5W3 292 aaKnown RBP16.35■□□□□ 0.21
NELFE-210ENST00000491139 OR8J1Q8NGP2 316 aa16.35■□□□□ 0.21
NELFE-210ENST00000491139 KIRREL1Q96J84 757 aa16.35■□□□□ 0.21
NELFE-210ENST00000491139 GON7Q9BXV9 100 aa16.35■□□□□ 0.21
NELFE-210ENST00000491139 PALMDQ9NP74 551 aa16.35■□□□□ 0.21
NELFE-210ENST00000491139 GAR1Q9NY12 217 aaKnown RBP16.35■□□□□ 0.21
NELFE-210ENST00000491139 OR6C3Q9NZP0 311 aa16.35■□□□□ 0.21
NELFE-210ENST00000491139 KBTBD11-OT1A0A1B0GTJ5 212 aa16.34■□□□□ 0.21
NELFE-210ENST00000491139 LINC01548A6NM66 108 aa16.34■□□□□ 0.21
NELFE-210ENST00000491139 J3QR06 171 aa16.34■□□□□ 0.21
NELFE-210ENST00000491139 AP4M1O00189 453 aa16.34■□□□□ 0.21
NELFE-210ENST00000491139 IGKV1D-33P01593 117 aa16.34■□□□□ 0.21
NELFE-210ENST00000491139 IGKV1-33P01594 117 aa16.34■□□□□ 0.21
NELFE-210ENST00000491139 PRKACBP22694 351 aa16.34■□□□□ 0.21
NELFE-210ENST00000491139 CDX1P47902 265 aaPredicted RBP16.34■□□□□ 0.21
NELFE-210ENST00000491139 SCN1BQ07699 218 aa16.34■□□□□ 0.21
NELFE-210ENST00000491139 PDZK1IP1Q13113 114 aa16.34■□□□□ 0.21
NELFE-210ENST00000491139 TMED1Q13445 227 aa16.34■□□□□ 0.21
NELFE-210ENST00000491139 MADCAM1Q13477 382 aa16.34■□□□□ 0.21
NELFE-210ENST00000491139 CBR4Q8N4T8 237 aa16.34■□□□□ 0.21
NELFE-210ENST00000491139 TCEANCQ8N8B7 351 aa16.34■□□□□ 0.21
NELFE-210ENST00000491139 TRUB1Q8WWH5 349 aaKnown RBP16.34■□□□□ 0.21
NELFE-210ENST00000491139 COQ2Q96H96 371 aa16.34■□□□□ 0.21
NELFE-210ENST00000491139 RIBC2Q9H4K1 309 aa16.34■□□□□ 0.21
NELFE-210ENST00000491139 SIRT4Q9Y6E7 314 aaPredicted RBP16.34■□□□□ 0.21
NELFE-210ENST00000491139 LY86O95711 162 aa16.33■□□□□ 0.2
NELFE-210ENST00000491139 IGHV3-7P01780 117 aa16.33■□□□□ 0.2
NELFE-210ENST00000491139 RAB7AP51149 207 aa16.33■□□□□ 0.2
NELFE-210ENST00000491139 ZNF260Q3ZCT1 412 aa16.33■□□□□ 0.2
NELFE-210ENST00000491139 LHFPL2Q6ZUX7 228 aa16.33■□□□□ 0.2
NELFE-210ENST00000491139 SSX6Q7RTT6 188 aa16.33■□□□□ 0.2
NELFE-210ENST00000491139 OR8H3Q8N146 312 aa16.33■□□□□ 0.2
NELFE-210ENST00000491139 CHST4Q8NCG5 386 aa16.33■□□□□ 0.2
NELFE-210ENST00000491139 COMMD4Q9H0A8 199 aa16.33■□□□□ 0.2
NELFE-210ENST00000491139 HUWE1Q7Z6Z7 4374 aaKnown RBP16.33■□□□□ 0.2
NELFE-210ENST00000491139 IGKV1-9A0A0C4DH69 117 aa16.32■□□□□ 0.2
NELFE-210ENST00000491139 POLR2IP36954 125 aaKnown RBP16.32■□□□□ 0.2
NELFE-210ENST00000491139 FOXE3Q13461 319 aa16.32■□□□□ 0.2
NELFE-210ENST00000491139 GPR50Q13585 617 aa16.32■□□□□ 0.2
NELFE-210ENST00000491139 DIAPH2-AS1Q14236 149 aa16.32■□□□□ 0.2
NELFE-210ENST00000491139 SLC25A30Q5SVS4 291 aa16.32■□□□□ 0.2
NELFE-210ENST00000491139 SBSPONQ8IVN8 264 aa16.32■□□□□ 0.2
NELFE-210ENST00000491139 ZNF565Q8N9K5 539 aa16.32■□□□□ 0.2
NELFE-210ENST00000491139 HAVCR2Q8TDQ0 301 aa16.32■□□□□ 0.2
NELFE-210ENST00000491139 LEAP2Q969E1 77 aa16.32■□□□□ 0.2
NELFE-210ENST00000491139 RDH12Q96NR8 316 aa16.32■□□□□ 0.2
NELFE-210ENST00000491139 TBX5Q99593 518 aa16.32■□□□□ 0.2
NELFE-210ENST00000491139 C8orf4Q9NR00 106 aa16.32■□□□□ 0.2
NELFE-210ENST00000491139 WARS2Q9UGM6 360 aaKnown RBP16.32■□□□□ 0.2
NELFE-210ENST00000491139 IGKV1-12A0A0C4DH73 117 aa16.31■□□□□ 0.2
NELFE-210ENST00000491139 LOC107986453A0A1B0GWG9 222 aa16.31■□□□□ 0.2
NELFE-210ENST00000491139 METTL15A6NJ78 407 aa16.31■□□□□ 0.2
NELFE-210ENST00000491139 NCBP2LA6PVI3 153 aaKnown RBP16.31■□□□□ 0.2
NELFE-210ENST00000491139 M0R129 80 aa16.31■□□□□ 0.2
NELFE-210ENST00000491139 IGKV1D-12P01611 117 aa16.31■□□□□ 0.2
NELFE-210ENST00000491139 ELANEP08246 267 aa16.31■□□□□ 0.2
NELFE-210ENST00000491139 ATF1P18846 271 aa16.31■□□□□ 0.2
NELFE-210ENST00000491139 HTR1FP30939 366 aa16.31■□□□□ 0.2
NELFE-210ENST00000491139 GPR12P47775 334 aa16.31■□□□□ 0.2
NELFE-210ENST00000491139 ATXN7L3Q14CW9 347 aaPredicted RBP16.31■□□□□ 0.2
NELFE-210ENST00000491139 RFT1Q96AA3 541 aa16.31■□□□□ 0.2
NELFE-210ENST00000491139 ADAT3Q96EY9 351 aaPredicted RBP16.31■□□□□ 0.2
NELFE-210ENST00000491139 PPIL3Q9H2H8 161 aaKnown RBP16.31■□□□□ 0.2
NELFE-210ENST00000491139 PSG11Q9UQ72 335 aa16.31■□□□□ 0.2
NELFE-210ENST00000491139 SLC33A1O00400 549 aaPredicted RBP16.3■□□□□ 0.2
NELFE-210ENST00000491139 CCRL2O00421 344 aa16.3■□□□□ 0.2
NELFE-210ENST00000491139 DEGS1O15121 323 aa16.3■□□□□ 0.2
NELFE-210ENST00000491139 KDM4BO94953 1096 aa16.3■□□□□ 0.2
NELFE-210ENST00000491139 OCM2P0CE71 109 aa16.3■□□□□ 0.2
NELFE-210ENST00000491139 OCMP0CE72 109 aaPredicted RBP16.3■□□□□ 0.2
NELFE-210ENST00000491139 UBCP0CG48 685 aaKnown RBP16.3■□□□□ 0.2
NELFE-210ENST00000491139 CGB3P0DN86 165 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms