RNA–Protein interactions for RNA: ENST00000489857.5

FAM3D-204, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-204ENST00000489857 PCDHB16Q9NRJ7 776 aa11.82□□□□□ -0.52
FAM3D-204ENST00000489857 OR6C3Q9NZP0 311 aa11.82□□□□□ -0.52
FAM3D-204ENST00000489857 ZMAT5Q9UDW3 170 aaKnown RBP11.82□□□□□ -0.52
FAM3D-204ENST00000489857 GNG8Q9UK08 70 aa11.82□□□□□ -0.52
FAM3D-204ENST00000489857 RYR2Q92736 4967 aa11.81□□□□□ -0.52
FAM3D-204ENST00000489857 LINC01548A6NM66 108 aa11.81□□□□□ -0.52
FAM3D-204ENST00000489857 CCL24O00175 119 aa11.81□□□□□ -0.52
FAM3D-204ENST00000489857 RAMP3O60896 148 aa11.81□□□□□ -0.52
FAM3D-204ENST00000489857 NANOS3P60323 173 aaKnown RBP11.81□□□□□ -0.52
FAM3D-204ENST00000489857 SLC35B1P78383 322 aa11.81□□□□□ -0.52
FAM3D-204ENST00000489857 FAM220AQ7Z4H9 259 aa11.81□□□□□ -0.52
FAM3D-204ENST00000489857 STPG2Q8N412 459 aa11.81□□□□□ -0.52
FAM3D-204ENST00000489857 COMMD1Q8N668 190 aa11.81□□□□□ -0.52
FAM3D-204ENST00000489857 CHST4Q8NCG5 386 aa11.81□□□□□ -0.52
FAM3D-204ENST00000489857 OR51A4Q8NGJ6 313 aa11.81□□□□□ -0.52
FAM3D-204ENST00000489857 OR13A1Q8NGR1 328 aa11.81□□□□□ -0.52
FAM3D-204ENST00000489857 OR13C9Q8NGT0 318 aa11.81□□□□□ -0.52
FAM3D-204ENST00000489857 PRR25Q96S07 402 aa11.81□□□□□ -0.52
FAM3D-204ENST00000489857 CALYQ9NYX4 217 aa11.81□□□□□ -0.52
FAM3D-204ENST00000489857 FRRS1LQ9P0K9 344 aa11.81□□□□□ -0.52
FAM3D-204ENST00000489857 KIF25Q9UIL4 384 aa11.81□□□□□ -0.52
FAM3D-204ENST00000489857 PSG11Q9UQ72 335 aa11.81□□□□□ -0.52
FAM3D-204ENST00000489857 POMPQ9Y244 141 aa11.81□□□□□ -0.52
FAM3D-204ENST00000489857 AMMECR1Q9Y4X0 333 aaPredicted RBP11.81□□□□□ -0.52
FAM3D-204ENST00000489857 DEGS1O15121 323 aa11.8□□□□□ -0.52
FAM3D-204ENST00000489857 IGKV1D-33P01593 117 aa11.8□□□□□ -0.52
FAM3D-204ENST00000489857 IGKV1-33P01594 117 aa11.8□□□□□ -0.52
FAM3D-204ENST00000489857 MT-ND2P03891 347 aa11.8□□□□□ -0.52
FAM3D-204ENST00000489857 ISG15P05161 165 aa11.8□□□□□ -0.52
FAM3D-204ENST00000489857 POLR2IP36954 125 aaKnown RBP11.8□□□□□ -0.52
FAM3D-204ENST00000489857 GLP1RP43220 463 aa11.8□□□□□ -0.52
FAM3D-204ENST00000489857 RAB25P57735 213 aa11.8□□□□□ -0.52
FAM3D-204ENST00000489857 MADCAM1Q13477 382 aa11.8□□□□□ -0.52
FAM3D-204ENST00000489857 DEFB136Q30KP8 78 aa11.8□□□□□ -0.52
FAM3D-204ENST00000489857 LCNL1Q6ZST4 164 aa11.8□□□□□ -0.52
FAM3D-204ENST00000489857 SAXO1Q8IYX7 474 aa11.8□□□□□ -0.52
FAM3D-204ENST00000489857 CCDC197Q8NCU1 140 aa11.8□□□□□ -0.52
FAM3D-204ENST00000489857 HRASLS5Q96KN8 279 aa11.8□□□□□ -0.52
FAM3D-204ENST00000489857 RHOFQ9HBH0 211 aa11.8□□□□□ -0.52
FAM3D-204ENST00000489857 NEK6Q9HC98 313 aa11.8□□□□□ -0.52
FAM3D-204ENST00000489857 IDI2-AS1Q9NZ38 188 aa11.8□□□□□ -0.52
FAM3D-204ENST00000489857 HSPB6O14558 160 aa11.79□□□□□ -0.52
FAM3D-204ENST00000489857 IL1AP01583 271 aa11.79□□□□□ -0.52
FAM3D-204ENST00000489857 RPLP1P05386 114 aaKnown RBP11.79□□□□□ -0.52
FAM3D-204ENST00000489857 OCM2P0CE71 109 aa11.79□□□□□ -0.52
FAM3D-204ENST00000489857 OCMP0CE72 109 aaPredicted RBP11.79□□□□□ -0.52
FAM3D-204ENST00000489857 ATP6V1E1P36543 226 aa11.79□□□□□ -0.52
FAM3D-204ENST00000489857 GP2P55259 537 aaKnown RBP11.79□□□□□ -0.52
FAM3D-204ENST00000489857 BNIP1Q12981 228 aa11.79□□□□□ -0.52
FAM3D-204ENST00000489857 FOXRED2Q8IWF2 684 aa11.79□□□□□ -0.52
FAM3D-204ENST00000489857 OR8H3Q8N146 312 aa11.79□□□□□ -0.52
FAM3D-204ENST00000489857 OR51T1Q8NGJ9 327 aa11.79□□□□□ -0.52
FAM3D-204ENST00000489857 RFESDQ8TAC1 157 aa11.79□□□□□ -0.52
FAM3D-204ENST00000489857 EME1Q96AY2 570 aa11.79□□□□□ -0.52
FAM3D-204ENST00000489857 ASCL2Q99929 193 aa11.79□□□□□ -0.52
FAM3D-204ENST00000489857 OSBPL10Q9BXB5 764 aa11.79□□□□□ -0.52
FAM3D-204ENST00000489857 GABARAPL1Q9H0R8 117 aa11.79□□□□□ -0.52
FAM3D-204ENST00000489857 DCLRE1BQ9H816 532 aa11.79□□□□□ -0.52
FAM3D-204ENST00000489857 LINC00574Q9H8X3 128 aa11.79□□□□□ -0.52
FAM3D-204ENST00000489857 MEIKINA0A087WXM9 373 aa11.78□□□□□ -0.52
FAM3D-204ENST00000489857 NPIPB11E5RHQ5 1161 aa11.78□□□□□ -0.52
FAM3D-204ENST00000489857 G3V2T6 193 aa11.78□□□□□ -0.52
FAM3D-204ENST00000489857 C3orf84H3BNL1 204 aa11.78□□□□□ -0.52
FAM3D-204ENST00000489857 ZFPL1O95159 310 aa11.78□□□□□ -0.52
FAM3D-204ENST00000489857 GNG10P50151 68 aa11.78□□□□□ -0.52
FAM3D-204ENST00000489857 RAB7AP51149 207 aa11.78□□□□□ -0.52
FAM3D-204ENST00000489857 ZP1P60852 638 aa11.78□□□□□ -0.52
FAM3D-204ENST00000489857 TMED1Q13445 227 aa11.78□□□□□ -0.52
FAM3D-204ENST00000489857 ATP6AP1Q15904 470 aa11.78□□□□□ -0.52
FAM3D-204ENST00000489857 LTC4SQ16873 150 aa11.78□□□□□ -0.52
FAM3D-204ENST00000489857 FDX2Q6P4F2 183 aa11.78□□□□□ -0.52
FAM3D-204ENST00000489857 TEX38Q6PEX7 206 aa11.78□□□□□ -0.52
FAM3D-204ENST00000489857 HAVCR2Q8TDQ0 301 aa11.78□□□□□ -0.52
FAM3D-204ENST00000489857 CIB1Q99828 191 aa11.78□□□□□ -0.52
FAM3D-204ENST00000489857 MYRFQ9Y2G1 1151 aa11.78□□□□□ -0.52
FAM3D-204ENST00000489857 HUWE1Q7Z6Z7 4374 aaKnown RBP11.78□□□□□ -0.52
FAM3D-204ENST00000489857 TRAV24A0A0B4J272 114 aa11.77□□□□□ -0.53
FAM3D-204ENST00000489857 A0A1W2PPE3 182 aa11.77□□□□□ -0.53
FAM3D-204ENST00000489857 H0YJX3 145 aa11.77□□□□□ -0.53
FAM3D-204ENST00000489857 AP4M1O00189 453 aa11.77□□□□□ -0.53
FAM3D-204ENST00000489857 GYG2O15488 501 aa11.77□□□□□ -0.53
FAM3D-204ENST00000489857 TMEM225BP0DP42 221 aa11.77□□□□□ -0.53
FAM3D-204ENST00000489857 GPR12P47775 334 aa11.77□□□□□ -0.53
FAM3D-204ENST00000489857 EBI3Q14213 229 aa11.77□□□□□ -0.53
FAM3D-204ENST00000489857 KIR2DS1Q14954 304 aa11.77□□□□□ -0.53
FAM3D-204ENST00000489857 PNLIPRP3Q17RR3 467 aa11.77□□□□□ -0.53
FAM3D-204ENST00000489857 DNAL1Q4LDG9 190 aa11.77□□□□□ -0.53
FAM3D-204ENST00000489857 PAN3Q58A45 887 aaKnown RBP11.77□□□□□ -0.53
FAM3D-204ENST00000489857 C9orf66Q5T8R8 295 aa11.77□□□□□ -0.53
FAM3D-204ENST00000489857 Q8N6K4 173 aa11.77□□□□□ -0.53
FAM3D-204ENST00000489857 ZNF565Q8N9K5 539 aa11.77□□□□□ -0.53
FAM3D-204ENST00000489857 OR8J1Q8NGP2 316 aa11.77□□□□□ -0.53
FAM3D-204ENST00000489857 OR5M8Q8NGP6 311 aa11.77□□□□□ -0.53
FAM3D-204ENST00000489857 OR13C3Q8NGS6 347 aa11.77□□□□□ -0.53
FAM3D-204ENST00000489857 OR8U1Q8NH10 309 aa11.77□□□□□ -0.53
FAM3D-204ENST00000489857 PLPPR1Q8TBJ4 325 aa11.77□□□□□ -0.53
FAM3D-204ENST00000489857 MRGPRDQ8TDS7 321 aa11.77□□□□□ -0.53
FAM3D-204ENST00000489857 EAF1Q96JC9 268 aaPredicted RBP11.77□□□□□ -0.53
FAM3D-204ENST00000489857 NCOR1P1Q9H4R4 102 aa11.77□□□□□ -0.53
FAM3D-204ENST00000489857 ZCCHC4Q9H5U6 513 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms