RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 SLITRK2Q9H156 845 aa11.63□□□□□ -0.55
BRCA1-218ENST00000489037 MEGF9Q9H1U4 602 aa11.63□□□□□ -0.55
BRCA1-218ENST00000489037 BEX1Q9HBH7 125 aa11.63□□□□□ -0.55
BRCA1-218ENST00000489037 VPREB3Q9UKI3 123 aa11.63□□□□□ -0.55
BRCA1-218ENST00000489037 MRPS28Q9Y2Q9 187 aaKnown RBP11.63□□□□□ -0.55
BRCA1-218ENST00000489037 ZNF729A6NN14 1252 aaPredicted RBP11.62□□□□□ -0.55
BRCA1-218ENST00000489037 OMGP23515 440 aa11.62□□□□□ -0.55
BRCA1-218ENST00000489037 RAG2P55895 527 aa11.62□□□□□ -0.55
BRCA1-218ENST00000489037 RBM11P57052 281 aaKnown RBP11.62□□□□□ -0.55
BRCA1-218ENST00000489037 AANATQ16613 207 aa11.62□□□□□ -0.55
BRCA1-218ENST00000489037 MPV17LQ2QL34 196 aa11.62□□□□□ -0.55
BRCA1-218ENST00000489037 LRRC75BQ2VPJ9 315 aa11.62□□□□□ -0.55
BRCA1-218ENST00000489037 NHLRC3Q5JS37 347 aa11.62□□□□□ -0.55
BRCA1-218ENST00000489037 ATAD3CQ5T2N8 411 aa11.62□□□□□ -0.55
BRCA1-218ENST00000489037 AWAT2Q6E213 333 aa11.62□□□□□ -0.55
BRCA1-218ENST00000489037 DHRS7BQ6IAN0 325 aaPredicted RBP11.62□□□□□ -0.55
BRCA1-218ENST00000489037 GLIPR1L1Q6UWM5 242 aa11.62□□□□□ -0.55
BRCA1-218ENST00000489037 TCF23Q7RTU1 214 aa11.62□□□□□ -0.55
BRCA1-218ENST00000489037 OR11H6Q8NGC7 330 aa11.62□□□□□ -0.55
BRCA1-218ENST00000489037 SGCDQ92629 289 aa11.62□□□□□ -0.55
BRCA1-218ENST00000489037 MRPS24Q96EL2 167 aaKnown RBP11.62□□□□□ -0.55
BRCA1-218ENST00000489037 CLEC7AQ9BXN2 247 aa11.62□□□□□ -0.55
BRCA1-218ENST00000489037 TMEM133Q9H2Q1 129 aa11.62□□□□□ -0.55
BRCA1-218ENST00000489037 ISYNA1Q9NPH2 558 aa11.62□□□□□ -0.55
BRCA1-218ENST00000489037 LSM2Q9Y333 95 aaKnown RBP11.62□□□□□ -0.55
BRCA1-218ENST00000489037 MEIKINA0A087WXM9 373 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 TRAV24A0A0B4J272 114 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 MAGEA13PA6NCF6 341 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 H3BUI4 141 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 H3BUX3 64 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 PIN1P1O15428 100 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 NDUFA7O95182 113 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 CDK2P24941 298 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 PSMA1P25786 263 aaKnown RBP11.61□□□□□ -0.55
BRCA1-218ENST00000489037 TAF9Q16594 264 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 HSD17B12Q53GQ0 312 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 LIPKQ5VXJ0 399 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 GLT8D1Q68CQ7 371 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 ZNF626Q68DY1 528 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 UNQ9370/PRO34162Q6UXP9 181 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 HEPN1Q6WQI6 88 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 CEACAM19Q7Z692 300 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 RTN4RL2Q86UN3 420 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 NDNFQ8TB73 568 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 NEK7Q8TDX7 302 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 MALSU1Q96EH3 234 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 COQ2Q96H96 371 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 UQCC2Q9BRT2 126 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 ZNF747Q9BV97 191 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 DPCDQ9BVM2 203 aaPredicted RBP11.61□□□□□ -0.55
BRCA1-218ENST00000489037 NCOR1P1Q9H4R4 102 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 SPACA1Q9HBV2 294 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 ABCB10Q9NRK6 738 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 C1RLQ9NZP8 487 aa11.61□□□□□ -0.55
BRCA1-218ENST00000489037 IGHV2-26A0A0B4J1V2 119 aa11.6□□□□□ -0.55
BRCA1-218ENST00000489037 TOR1AO14656 332 aa11.6□□□□□ -0.55
BRCA1-218ENST00000489037 GEMIN2O14893 280 aaKnown RBP11.6□□□□□ -0.55
BRCA1-218ENST00000489037 GLP1RP43220 463 aa11.6□□□□□ -0.55
BRCA1-218ENST00000489037 MLLT11Q13015 90 aaPredicted RBP11.6□□□□□ -0.55
BRCA1-218ENST00000489037 TPBGQ13641 420 aa11.6□□□□□ -0.55
BRCA1-218ENST00000489037 FAM189A2Q15884 450 aa11.6□□□□□ -0.55
BRCA1-218ENST00000489037 MINOS1Q5TGZ0 78 aa11.6□□□□□ -0.55
BRCA1-218ENST00000489037 PRAMEF5Q5TYX0 476 aa11.6□□□□□ -0.55
BRCA1-218ENST00000489037 SHISA2Q6UWI4 295 aa11.6□□□□□ -0.55
BRCA1-218ENST00000489037 SUMF2Q8NBJ7 301 aa11.6□□□□□ -0.55
BRCA1-218ENST00000489037 ZNF596Q8TC21 504 aa11.6□□□□□ -0.55
BRCA1-218ENST00000489037 C17orf50Q8WW18 174 aa11.6□□□□□ -0.55
BRCA1-218ENST00000489037 PHYHIPQ92561 330 aa11.6□□□□□ -0.55
BRCA1-218ENST00000489037 IFT22Q9H7X7 185 aa11.6□□□□□ -0.55
BRCA1-218ENST00000489037 RAB18Q9NP72 206 aa11.6□□□□□ -0.55
BRCA1-218ENST00000489037 GHRLQ9UBU3 117 aa11.6□□□□□ -0.55
BRCA1-218ENST00000489037 KIF25Q9UIL4 384 aa11.6□□□□□ -0.55
BRCA1-218ENST00000489037 MMP24Q9Y5R2 645 aa11.6□□□□□ -0.55
BRCA1-218ENST00000489037 MINOS1-NBL1R4GNA1 71 aa11.6□□□□□ -0.55
BRCA1-218ENST00000489037 KBTBD11-OT1A0A1B0GTJ5 212 aa11.59□□□□□ -0.55
BRCA1-218ENST00000489037 FAM90A8PA6NJQ4 464 aa11.59□□□□□ -0.55
BRCA1-218ENST00000489037 ODF3BA8MYP8 253 aa11.59□□□□□ -0.55
BRCA1-218ENST00000489037 CRTAPO75718 401 aaPredicted RBP11.59□□□□□ -0.55
BRCA1-218ENST00000489037 UBBP0CG47 229 aa11.59□□□□□ -0.55
BRCA1-218ENST00000489037 SRMP19623 302 aa11.59□□□□□ -0.55
BRCA1-218ENST00000489037 MDKP21741 143 aaPredicted RBP11.59□□□□□ -0.55
BRCA1-218ENST00000489037 HTR1DP28221 377 aa11.59□□□□□ -0.55
BRCA1-218ENST00000489037 RANBP1P43487 201 aa11.59□□□□□ -0.55
BRCA1-218ENST00000489037 PRRX1P54821 245 aa11.59□□□□□ -0.55
BRCA1-218ENST00000489037 RBM39Q14498 530 aaKnown RBP11.59□□□□□ -0.55
BRCA1-218ENST00000489037 SSX2Q16385 188 aa11.59□□□□□ -0.55
BRCA1-218ENST00000489037 LY6EQ16553 131 aa11.59□□□□□ -0.55
BRCA1-218ENST00000489037 LHFPL4Q7Z7J7 247 aa11.59□□□□□ -0.55
BRCA1-218ENST00000489037 ABHD12Q8N2K0 398 aa11.59□□□□□ -0.55
BRCA1-218ENST00000489037 DTX3Q8N9I9 347 aa11.59□□□□□ -0.55
BRCA1-218ENST00000489037 TMEM203Q969S6 136 aa11.59□□□□□ -0.55
BRCA1-218ENST00000489037 CREB3L1Q96BA8 519 aa11.59□□□□□ -0.55
BRCA1-218ENST00000489037 MGLLQ99685 303 aa11.59□□□□□ -0.55
BRCA1-218ENST00000489037 CST11Q9H112 138 aa11.59□□□□□ -0.55
BRCA1-218ENST00000489037 PPIL3Q9H2H8 161 aaKnown RBP11.59□□□□□ -0.55
BRCA1-218ENST00000489037 A0A1W2PP11 408 aa11.58□□□□□ -0.56
BRCA1-218ENST00000489037 TMEM30CPA0ZSE6 113 aa11.58□□□□□ -0.56
BRCA1-218ENST00000489037 CLPSL1A2RUU4 121 aa11.58□□□□□ -0.56
BRCA1-218ENST00000489037 MCRIP1C9JLW8 97 aa11.58□□□□□ -0.56
BRCA1-218ENST00000489037 MRPS14O60783 128 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms