RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 LYPD6BQ8NI32 183 aa15.73■□□□□ 0.11
COL16A1-215ENST00000488897 GLYATL2Q8WU03 294 aa15.73■□□□□ 0.11
COL16A1-215ENST00000488897 PRDM14Q9GZV8 571 aa15.73■□□□□ 0.11
COL16A1-215ENST00000488897 NAA60Q9H7X0 242 aa15.73■□□□□ 0.11
COL16A1-215ENST00000488897 FAM212BQ9NTI7 297 aaPredicted RBP15.73■□□□□ 0.11
COL16A1-215ENST00000488897 RYDENQ9NUL5 291 aaKnown RBP15.73■□□□□ 0.11
COL16A1-215ENST00000488897 USP9XQ93008 2570 aaPredicted RBP15.73■□□□□ 0.11
COL16A1-215ENST00000488897 ANGPTL7O43827 346 aa15.73■□□□□ 0.11
COL16A1-215ENST00000488897 NFYBP25208 207 aa15.73■□□□□ 0.11
COL16A1-215ENST00000488897 RBP2P50120 134 aa15.73■□□□□ 0.11
COL16A1-215ENST00000488897 TMEM187Q14656 261 aa15.73■□□□□ 0.11
COL16A1-215ENST00000488897 HMGN3Q15651 99 aa15.73■□□□□ 0.11
COL16A1-215ENST00000488897 ASCL4Q6XD76 172 aa15.73■□□□□ 0.11
COL16A1-215ENST00000488897 LHFPL2Q6ZUX7 228 aa15.73■□□□□ 0.11
COL16A1-215ENST00000488897 KIRREL1Q96J84 757 aa15.73■□□□□ 0.11
COL16A1-215ENST00000488897 SUCNR1Q9BXA5 334 aa15.73■□□□□ 0.11
COL16A1-215ENST00000488897 PLA2G2EQ9NZK7 142 aa15.73■□□□□ 0.11
COL16A1-215ENST00000488897 SPTAN1Q13813 2472 aaKnown RBP15.73■□□□□ 0.11
COL16A1-215ENST00000488897 MSTNO14793 375 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 AGPAT2O15120 278 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 DNPH1O43598 174 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 SPRY1O43609 319 aaPredicted RBP15.72■□□□□ 0.11
COL16A1-215ENST00000488897 SYNGR3O43761 229 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 SCGB1D2O95969 90 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 CST2P09228 141 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 AKR1D1P51857 326 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 SHEQ5VZ18 495 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 TUSC5Q8IXB3 177 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 GPR137CQ8N3F9 429 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 LRTM2Q8N967 370 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 OR2AE1Q8NHA4 323 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 FAM57AQ8TBR7 257 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 TOMM40LQ969M1 308 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 BORCS8Q96FH0 119 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 C12orf49Q9H741 205 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 CALHM2Q9HA72 323 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 CRYBG3Q68DQ2 2970 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 CRYBA1P05813 215 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 CHATP28329 748 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 OPRM1P35372 400 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 RAC3P60763 192 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 ACSF3Q4G176 576 aaPredicted RBP15.72■□□□□ 0.11
COL16A1-215ENST00000488897 COMMD1Q8N668 190 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 OR1F12Q8NHA8 337 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 RXFP4Q8TDU9 374 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 RTN4IP1Q8WWV3 396 aaPredicted RBP15.72■□□□□ 0.11
COL16A1-215ENST00000488897 ZNF837Q96EG3 531 aaPredicted RBP15.72■□□□□ 0.11
COL16A1-215ENST00000488897 SMIM3Q9BZL3 60 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 ARV1Q9H2C2 271 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 LIME1Q9H400 295 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 KPTNQ9Y664 436 aa15.72■□□□□ 0.11
COL16A1-215ENST00000488897 SPTBN1Q01082 2364 aaKnown RBP15.71■□□□□ 0.11
COL16A1-215ENST00000488897 BORCS7-ASMTA0A0B4J1R7 106 aa15.71■□□□□ 0.11
COL16A1-215ENST00000488897 EDN3P14138 238 aa15.71■□□□□ 0.11
COL16A1-215ENST00000488897 DMBX1Q8NFW5 382 aa15.71■□□□□ 0.11
COL16A1-215ENST00000488897 SMCO4Q9NRQ5 59 aa15.71■□□□□ 0.11
COL16A1-215ENST00000488897 ZNF391Q9UJN7 358 aa15.71■□□□□ 0.11
COL16A1-215ENST00000488897 IGKV1-27A0A075B6S5 117 aa15.7■□□□□ 0.1
COL16A1-215ENST00000488897 PQLC2LA1A4F0 135 aa15.7■□□□□ 0.1
COL16A1-215ENST00000488897 ZNF98A6NK75 572 aa15.7■□□□□ 0.1
COL16A1-215ENST00000488897 SLC22A20A6NK97 555 aa15.7■□□□□ 0.1
COL16A1-215ENST00000488897 FAM157AC9JC47 383 aa15.7■□□□□ 0.1
COL16A1-215ENST00000488897 MBPP02686 304 aaPredicted RBP15.7■□□□□ 0.1
COL16A1-215ENST00000488897 LCATP04180 440 aa15.7■□□□□ 0.1
COL16A1-215ENST00000488897 OR5AC1P0C628 307 aa15.7■□□□□ 0.1
COL16A1-215ENST00000488897 SEC11BP0C7V7 166 aa15.7■□□□□ 0.1
COL16A1-215ENST00000488897 RPL35P42766 123 aaKnown RBP15.7■□□□□ 0.1
COL16A1-215ENST00000488897 CDSNQ15517 529 aa15.7■□□□□ 0.1
COL16A1-215ENST00000488897 GPR157Q5UAW9 335 aa15.7■□□□□ 0.1
COL16A1-215ENST00000488897 SYT3Q9BQG1 590 aa15.7■□□□□ 0.1
COL16A1-215ENST00000488897 BCO1Q9HAY6 547 aa15.7■□□□□ 0.1
COL16A1-215ENST00000488897 PRR14LQ5THK1 2151 aa15.7■□□□□ 0.1
COL16A1-215ENST00000488897 MEX3AA1L020 520 aaKnown RBP15.7■□□□□ 0.1
COL16A1-215ENST00000488897 PCP4L1A6NKN8 68 aa15.7■□□□□ 0.1
COL16A1-215ENST00000488897 PRRG2O14669 202 aa15.7■□□□□ 0.1
COL16A1-215ENST00000488897 ZNF774Q6NX45 483 aa15.7■□□□□ 0.1
COL16A1-215ENST00000488897 H7C1Q1 480 aa15.69■□□□□ 0.1
COL16A1-215ENST00000488897 GPR137BO60478 399 aa15.69■□□□□ 0.1
COL16A1-215ENST00000488897 TSPAN15O95858 294 aa15.69■□□□□ 0.1
COL16A1-215ENST00000488897 NRASP01111 189 aa15.69■□□□□ 0.1
COL16A1-215ENST00000488897 OR8U9P0C7N5 309 aa15.69■□□□□ 0.1
COL16A1-215ENST00000488897 PAX6P26367 422 aa15.69■□□□□ 0.1
COL16A1-215ENST00000488897 SP6Q3SY56 376 aa15.69■□□□□ 0.1
COL16A1-215ENST00000488897 LIAT1Q6ZQX7 453 aa15.69■□□□□ 0.1
COL16A1-215ENST00000488897 NUFIP2Q7Z417 695 aaKnown RBP15.69■□□□□ 0.1
COL16A1-215ENST00000488897 P4HA3Q7Z4N8 544 aa15.69■□□□□ 0.1
COL16A1-215ENST00000488897 CNEP1R1Q8N9A8 125 aa15.69■□□□□ 0.1
COL16A1-215ENST00000488897 OR8U1Q8NH10 309 aa15.69■□□□□ 0.1
COL16A1-215ENST00000488897 ERGIC1Q969X5 290 aa15.69■□□□□ 0.1
COL16A1-215ENST00000488897 STARD10Q9Y365 291 aa15.69■□□□□ 0.1
COL16A1-215ENST00000488897 C9JQL5 133 aa15.69■□□□□ 0.1
COL16A1-215ENST00000488897 SPP1P10451 314 aa15.69■□□□□ 0.1
COL16A1-215ENST00000488897 TMEM42Q69YG0 159 aa15.69■□□□□ 0.1
COL16A1-215ENST00000488897 VWA1Q6PCB0 445 aa15.69■□□□□ 0.1
COL16A1-215ENST00000488897 OSR2Q8N2R0 312 aa15.69■□□□□ 0.1
COL16A1-215ENST00000488897 ST6GALNAC3Q8NDV1 305 aa15.69■□□□□ 0.1
COL16A1-215ENST00000488897 ZNF286AQ9HBT8 521 aa15.69■□□□□ 0.1
COL16A1-215ENST00000488897 TMEM38BQ9NVV0 291 aa15.69■□□□□ 0.1
COL16A1-215ENST00000488897 TIMM10BQ9Y5J6 103 aa15.69■□□□□ 0.1
COL16A1-215ENST00000488897 ARID1AO14497 2285 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms