RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 ZNF737O75373 536 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 SCGNO76038 276 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 GLAP06280 429 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 LIPFP07098 398 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 ZFP36P26651 326 aaKnown RBP8.53□□□□□ -1.04
SKA1-204ENST00000488454 BLVRBP30043 206 aaPredicted RBP8.53□□□□□ -1.04
SKA1-204ENST00000488454 VEGFCP49767 419 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 RPL31P62899 125 aaKnown RBP8.53□□□□□ -1.04
SKA1-204ENST00000488454 EDDM3AQ14507 147 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 KRBOX4Q5JUW0 171 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 RAB12Q6IQ22 244 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 METAP1DQ6UB28 335 aaPredicted RBP8.53□□□□□ -1.04
SKA1-204ENST00000488454 C17orf107Q6ZR85 190 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 Q6ZTK2 550 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 BPIFB2Q8N4F0 458 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 OR4S1Q8NGB4 309 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 LGALS14Q8TCE9 139 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 RAB40AQ8WXH6 277 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 TMEM186Q96B77 213 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 SHARPINQ9H0F6 387 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 LPAR5Q9H1C0 372 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 PPA2Q9H2U2 334 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 PLEKHJ1Q9NW61 149 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 HIF1ANQ9NWT6 349 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 ING3Q9NXR8 418 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 LPAR3Q9UBY5 353 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 SPATA2Q9UM82 520 aa8.53□□□□□ -1.04
SKA1-204ENST00000488454 MYO9AB2RTY4 2548 aa8.52□□□□□ -1.04
SKA1-204ENST00000488454 PPIAL4CA0A0B4J2A2 164 aa8.52□□□□□ -1.05
SKA1-204ENST00000488454 A0A0G2JMP0 313 aa8.52□□□□□ -1.05
SKA1-204ENST00000488454 A0A0X1KG70 313 aa8.52□□□□□ -1.05
SKA1-204ENST00000488454 hADV38S2A0JD32 116 aa8.52□□□□□ -1.05
SKA1-204ENST00000488454 KIAA1324LA8MWY0 1029 aaPredicted RBP8.52□□□□□ -1.05
SKA1-204ENST00000488454 CSN2P05814 226 aa8.52□□□□□ -1.05
SKA1-204ENST00000488454 PPIAL4GP0DN37 164 aa8.52□□□□□ -1.05
SKA1-204ENST00000488454 GATA3P23771 443 aa8.52□□□□□ -1.05
SKA1-204ENST00000488454 ERP29P30040 261 aaKnown RBP8.52□□□□□ -1.05
SKA1-204ENST00000488454 OR3A1P47881 315 aa8.52□□□□□ -1.05
SKA1-204ENST00000488454 DVL1P1P54792 670 aaPredicted RBP8.52□□□□□ -1.05
SKA1-204ENST00000488454 MEF2CQ06413 473 aaPredicted RBP8.52□□□□□ -1.05
SKA1-204ENST00000488454 AESQ08117 197 aa8.52□□□□□ -1.05
SKA1-204ENST00000488454 DYNC1I2Q13409 638 aaKnown RBP8.52□□□□□ -1.05
SKA1-204ENST00000488454 DCAF12L2Q5VW00 463 aa8.52□□□□□ -1.05
SKA1-204ENST00000488454 FAHD2BQ6P2I3 314 aaPredicted RBP8.52□□□□□ -1.05
SKA1-204ENST00000488454 BIVMQ86UB2 503 aa8.52□□□□□ -1.05
SKA1-204ENST00000488454 CMTM4Q8IZR5 234 aa8.52□□□□□ -1.05
SKA1-204ENST00000488454 FAM185AQ8N0U4 392 aa8.52□□□□□ -1.05
SKA1-204ENST00000488454 FAM89BQ8N5H3 189 aa8.52□□□□□ -1.05
SKA1-204ENST00000488454 OR4M2Q8NGB6 313 aa8.52□□□□□ -1.05
SKA1-204ENST00000488454 OR4M1Q8NGD0 313 aa8.52□□□□□ -1.05
SKA1-204ENST00000488454 RAB3CQ96E17 227 aa8.52□□□□□ -1.05
SKA1-204ENST00000488454 S100A16Q96FQ6 103 aaKnown RBP8.52□□□□□ -1.05
SKA1-204ENST00000488454 FAHD2AQ96GK7 314 aa8.52□□□□□ -1.05
SKA1-204ENST00000488454 NUDT16L1Q9BRJ7 211 aaKnown RBP8.52□□□□□ -1.05
SKA1-204ENST00000488454 NICN1Q9BSH3 213 aa8.52□□□□□ -1.05
SKA1-204ENST00000488454 DCTN5Q9BTE1 182 aa8.52□□□□□ -1.05
SKA1-204ENST00000488454 DIABLOQ9NR28 239 aa8.52□□□□□ -1.05
SKA1-204ENST00000488454 ETAA1Q9NY74 926 aa8.52□□□□□ -1.05
SKA1-204ENST00000488454 COMMD3Q9UBI1 195 aa8.52□□□□□ -1.05
SKA1-204ENST00000488454 RPUSD1Q9UJJ7 312 aaKnown RBP8.52□□□□□ -1.05
SKA1-204ENST00000488454 KCNS2Q9ULS6 477 aa8.52□□□□□ -1.05
SKA1-204ENST00000488454 POLR3KQ9Y2Y1 108 aaPredicted RBP8.52□□□□□ -1.05
SKA1-204ENST00000488454 AKAP9Q99996 3911 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 MEIKINA0A087WXM9 373 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 TRGV10A0A0A0MS01 117 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 IGHV2-70DA0A0C4DH43 119 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 KIR2DS1A0A191URI9 304 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 hCG_1809904A0A1W2PP81 198 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 A0A1W2PPE2 198 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 A0A1W2PR64 198 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 A0A1W2PRV1 198 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 UBE2QL1A1L167 161 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 SOCS1O15524 211 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 CD5LO43866 347 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 ZNF16P17020 682 aaPredicted RBP8.51□□□□□ -1.05
SKA1-204ENST00000488454 EFNB2P52799 333 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 P2RX3P56373 397 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 MRPS15P82914 257 aaKnown RBP8.51□□□□□ -1.05
SKA1-204ENST00000488454 PLA2G7Q13093 441 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 ATXN7L3Q14CW9 347 aaPredicted RBP8.51□□□□□ -1.05
SKA1-204ENST00000488454 ARL6IP1Q15041 203 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 CLEC9AQ6UXN8 241 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 TRAPPC6BQ86SZ2 158 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 FGFRL1Q8N441 504 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 SAMD12Q8N8I0 201 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 ZNF565Q8N9K5 539 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 OR5H6Q8NGV6 325 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 OR10R2Q8NGX6 335 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 DYNC2LI1Q8TCX1 351 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 FAAP24Q9BTP7 215 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 RBM38Q9H0Z9 239 aaKnown RBP8.51□□□□□ -1.05
SKA1-204ENST00000488454 BATF3Q9NR55 127 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 MMP26Q9NRE1 261 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 YAE1D1Q9NRH1 226 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 RHBDL2Q9NX52 303 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 OR6C3Q9NZP0 311 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 CCDC59Q9P031 241 aaKnown RBP8.51□□□□□ -1.05
SKA1-204ENST00000488454 RCC2Q9P258 522 aaKnown RBP8.51□□□□□ -1.05
SKA1-204ENST00000488454 INSIG2Q9Y5U4 225 aa8.51□□□□□ -1.05
SKA1-204ENST00000488454 MAP1AP78559 2803 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms