RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 CROCCP3Q8IVE0 287 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 IZUMO1Q8IYV9 350 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 FAM185AQ8N0U4 392 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 ZNF561Q8N587 486 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 SAMD12Q8N8I0 201 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 SUMF2Q8NBJ7 301 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 OR4S1Q8NGB4 309 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 PPP1R35Q8TAP8 253 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 SETD6Q8TBK2 473 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 CCDC107Q8WV48 283 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 SLC25A46Q96AG3 418 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 DGCR14Q96DF8 476 aaKnown RBP4.67□□□□□ -1.66
COPS3-208ENST00000486032 SNX22Q96L94 193 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 Q96M66 194 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 SSBP3Q9BWW4 388 aaPredicted RBP4.67□□□□□ -1.66
COPS3-208ENST00000486032 C6orf62Q9GZU0 229 aaPredicted RBP4.67□□□□□ -1.66
COPS3-208ENST00000486032 RBM38Q9H0Z9 239 aaKnown RBP4.67□□□□□ -1.66
COPS3-208ENST00000486032 LPAR5Q9H1C0 372 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 ZMAT3Q9HA38 289 aaKnown RBP4.67□□□□□ -1.66
COPS3-208ENST00000486032 CHMP1AQ9HD42 196 aaPredicted RBP4.67□□□□□ -1.66
COPS3-208ENST00000486032 PLEKHJ1Q9NW61 149 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 ZNF222Q9UK12 451 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 RAB22AQ9UL26 194 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 PEX16Q9Y5Y5 336 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 FLNAP21333 2647 aaKnown RBP4.67□□□□□ -1.66
COPS3-208ENST00000486032 CR1P17927 2039 aa4.67□□□□□ -1.66
COPS3-208ENST00000486032 MAP1AP78559 2803 aaPredicted RBP4.66□□□□□ -1.66
COPS3-208ENST00000486032 SVEP1Q4LDE5 3571 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 LOC105371242A0A075B767 164 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 A0A0A6YYD4 124 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 TRAV24A0A0B4J272 114 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 METTL21EPA6NDL7 271 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 MCRIP1C9JLW8 97 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 SLC33A1O00400 549 aaPredicted RBP4.66□□□□□ -1.66
COPS3-208ENST00000486032 TNFRSF13BO14836 293 aaPredicted RBP4.66□□□□□ -1.66
COPS3-208ENST00000486032 HPGDSO60760 199 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 FOXH1O75593 365 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 FCN3O75636 299 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 TK1P04183 234 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 MSMBP08118 114 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 IGHV4-31P0DP07 118 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 CD99P14209 185 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 GNB3P16520 340 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 ZFP36P26651 326 aaKnown RBP4.66□□□□□ -1.66
COPS3-208ENST00000486032 OR3A1P47881 315 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 GLIPR1P48060 266 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 QRFPP83859 136 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 AESQ08117 197 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 LTC4SQ16873 150 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 TMEM249Q2WGJ8 235 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 MOGAT2Q3SYC2 334 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 RNASE12Q5GAN4 147 aaKnown RBP4.66□□□□□ -1.66
COPS3-208ENST00000486032 KRBOX4Q5JUW0 171 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 RAB12Q6IQ22 244 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 C17orf107Q6ZR85 190 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 Q6ZTK2 550 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 BTN2A1Q7KYR7 527 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 C6orf201Q7Z4U5 140 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 TRAPPC6BQ86SZ2 158 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 BIVMQ86UB2 503 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 CMTM4Q8IZR5 234 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 OR8H2Q8N162 312 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 LINC01356Q8N9X3 169 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 OR56B1Q8NGI3 324 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 OR4K15Q8NH41 348 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 MCFD2Q8NI22 146 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 PLPPR1Q8TBJ4 325 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 DYNC2LI1Q8TCX1 351 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 AP3S1Q92572 193 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 MRPS24Q96EL2 167 aaKnown RBP4.66□□□□□ -1.66
COPS3-208ENST00000486032 SDSLQ96GA7 329 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 ARHGAP5-AS1Q96IT6 56 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 BCL7BQ9BQE9 202 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 DCTN5Q9BTE1 182 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 FAAP24Q9BTP7 215 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 DPCDQ9BVM2 203 aaPredicted RBP4.66□□□□□ -1.66
COPS3-208ENST00000486032 RHOFQ9HBH0 211 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 MMP26Q9NRE1 261 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 YAE1D1Q9NRH1 226 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 C19orf12Q9NSK7 152 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 RHBDL2Q9NX52 303 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 ETAA1Q9NY74 926 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 NDUFA13Q9P0J0 144 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 ABRACLQ9P1F3 81 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 ONECUT1Q9UBC0 465 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 SPATA2Q9UM82 520 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 MRPS7Q9Y2R9 242 aaKnown RBP4.66□□□□□ -1.66
COPS3-208ENST00000486032 DNHD1Q96M86 4753 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 ZANQ9Y493 2812 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 ARHGAP32A7KAX9 2087 aa4.66□□□□□ -1.66
COPS3-208ENST00000486032 ABCA2Q9BZC7 2435 aa4.65□□□□□ -1.66
COPS3-208ENST00000486032 ZFHX3Q15911 3703 aa4.65□□□□□ -1.66
COPS3-208ENST00000486032 TRAV18A0A075B6X5 111 aa4.65□□□□□ -1.67
COPS3-208ENST00000486032 MEIKINA0A087WXM9 373 aa4.65□□□□□ -1.67
COPS3-208ENST00000486032 A0A096LNT2 108 aa4.65□□□□□ -1.67
COPS3-208ENST00000486032 PPIAL4CA0A0B4J2A2 164 aa4.65□□□□□ -1.67
COPS3-208ENST00000486032 A0A1W2PRD5 423 aa4.65□□□□□ -1.67
COPS3-208ENST00000486032 A0A1W2PRF3 423 aa4.65□□□□□ -1.67
COPS3-208ENST00000486032 A0A1W2PRM7 423 aa4.65□□□□□ -1.67
COPS3-208ENST00000486032 A6NHS1 94 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms