RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 OLFM3Q96PB7 478 aa0.74□□□□□ -2.29
SCAF11-207ENST00000484275 PITX2Q99697 317 aa0.74□□□□□ -2.29
SCAF11-207ENST00000484275 TXNIPQ9H3M7 391 aa0.74□□□□□ -2.29
SCAF11-207ENST00000484275 METTL8Q9H825 291 aaKnown RBP0.74□□□□□ -2.29
SCAF11-207ENST00000484275 STMN3Q9NZ72 180 aa0.74□□□□□ -2.29
SCAF11-207ENST00000484275 SLC22A14Q9Y267 594 aa0.74□□□□□ -2.29
SCAF11-207ENST00000484275 ZNF706Q9Y5V0 76 aaPredicted RBP0.74□□□□□ -2.29
SCAF11-207ENST00000484275 SHANK3Q9BYB0 1731 aa0.74□□□□□ -2.29
SCAF11-207ENST00000484275 MALRD1Q5VYJ5 2156 aa0.74□□□□□ -2.29
SCAF11-207ENST00000484275 SLX4Q8IY92 1834 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 IGHV2-26A0A0B4J1V2 119 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 A0A1B0GXF2 115 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 RAB19A4D1S5 217 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 RBFOX3A6NFN3 312 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 A8MWP4 228 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 hCG_2039718K7EN88 272 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 PLPP3O14495 311 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 ISLRO14498 428 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 UBDO15205 165 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 CRXO43186 299 aaPredicted RBP0.73□□□□□ -2.29
SCAF11-207ENST00000484275 SPOPO43791 374 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 PSIP1O75475 530 aaKnown RBP0.73□□□□□ -2.29
SCAF11-207ENST00000484275 POP7O75817 140 aaKnown RBP0.73□□□□□ -2.29
SCAF11-207ENST00000484275 SC5DO75845 299 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 MYO1DO94832 1006 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 PDYNP01213 254 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 IGKV1D-33P01593 117 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 IGKV1-33P01594 117 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 OPN1SWP03999 348 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 GIMD1P0DJR0 217 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 SLC2A1P11166 492 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 GTF2F2P13984 249 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 PSMB9P28065 219 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 RPA3P35244 121 aaPredicted RBP0.73□□□□□ -2.29
SCAF11-207ENST00000484275 COILP38432 576 aaPredicted RBP0.73□□□□□ -2.29
SCAF11-207ENST00000484275 RANBP1P43487 201 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 TTPAP49638 278 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 CARD18P57730 90 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 VSNL1P62760 191 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 C2orf80Q0P641 193 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 CASP8Q14790 479 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 GUSBP1Q15486 140 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 GOLGA7BQ2TAP0 167 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 C18orf21Q32NC0 220 aaPredicted RBP0.73□□□□□ -2.29
SCAF11-207ENST00000484275 ZCWPW2Q504Y3 356 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 PYCR3Q53H96 274 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 ACTL10Q5JWF8 245 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 CYHR1Q6ZMK1 362 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 SSX6Q7RTT6 188 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 TCF23Q7RTU1 214 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 DPPA2Q7Z7J5 298 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 GALNT10Q86SR1 603 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 ZFP82Q8N141 532 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 SPICQ8N5J4 248 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 DNAAF3Q8N9W5 541 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 DRAXINQ8NBI3 349 aaPredicted RBP0.73□□□□□ -2.29
SCAF11-207ENST00000484275 OR2M3Q8NG83 312 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 OR4K17Q8NGC6 315 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 CLHC1Q8NHS4 586 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 LRRC20Q8TCA0 184 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 RAD51AP1Q96B01 352 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 LRRC39Q96DD0 335 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 MSANTD3Q96H12 275 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 GLT1D1Q96MS3 346 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 ANAPC13Q9BS18 74 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 BEX2Q9BXY8 128 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 ULBP1Q9BZM6 244 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 GABARAPL1Q9H0R8 117 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 RAB1BQ9H0U4 201 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 TMBIM4Q9HC24 238 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 RMND1Q9NWS8 449 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 MRPL16Q9NX20 251 aaKnown RBP0.73□□□□□ -2.29
SCAF11-207ENST00000484275 NAGKQ9UJ70 344 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 FADS3Q9Y5Q0 445 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 NOTCH1P46531 2555 aa0.73□□□□□ -2.29
SCAF11-207ENST00000484275 POLR3AO14802 1390 aaPredicted RBP0.72□□□□□ -2.29
SCAF11-207ENST00000484275 COL4A1P02462 1669 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 USP42Q9H9J4 1324 aaKnown RBP0.72□□□□□ -2.29
SCAF11-207ENST00000484275 NAV1Q8NEY1 1877 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 TRAV8-3A0A0A6YYJ7 113 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 FAM183AA6NL82 134 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 I3L4J1 428 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 M0QXV9 152 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 NDUFS8O00217 210 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 PSMD11O00231 422 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 SOX14O95416 240 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 GPR75O95800 540 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 APOA1P02647 267 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 S100A9P06702 114 aaKnown RBP0.72□□□□□ -2.29
SCAF11-207ENST00000484275 ZNF22P17026 224 aaPredicted RBP0.72□□□□□ -2.29
SCAF11-207ENST00000484275 CRABP2P29373 138 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 GTF2H1P32780 548 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 CBX5P45973 191 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 GCLMP48507 274 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 ATP5J2P56134 94 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 HBG1P69891 147 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 HBG2P69892 147 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 BAXQ07812 192 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 MMDQ15546 238 aa0.72□□□□□ -2.29
SCAF11-207ENST00000484275 TNXAQ16473 311 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms