RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 CLDN15P56746 228 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 SUMO2P61956 95 aaKnown RBP6.62□□□□□ -1.35
SNX13-208ENST00000482558 UBA52P62987 128 aaKnown RBP6.62□□□□□ -1.35
SNX13-208ENST00000482558 OR1C1Q15619 314 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 CSRP2Q16527 193 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 SLC22A6Q4U2R8 563 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 PHYHD1Q5SRE7 291 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 TMEM42Q69YG0 159 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 TMUB2Q71RG4 321 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 TMED4Q7Z7H5 227 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 PEG10Q86TG7 708 aaKnown RBP6.62□□□□□ -1.35
SNX13-208ENST00000482558 LRRC18Q8N456 261 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 OR13C8Q8NGS7 320 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 OR6K3Q8NGY3 331 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 COQ8AQ8NI60 647 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 LRRC20Q8TCA0 184 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 SCARB1Q8WTV0 552 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 EMG1Q92979 244 aaKnown RBP6.62□□□□□ -1.35
SNX13-208ENST00000482558 PIGTQ969N2 578 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 SGK3Q96BR1 496 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 PHYHIPLQ96FC7 376 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 BORCS8Q96FH0 119 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 REEP6Q96HR9 211 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 LYZL4Q96KX0 146 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 ATG101Q9BSB4 218 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 PDCD10Q9BUL8 212 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 OR2H1Q9GZK4 316 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 EGLN1Q9GZT9 426 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 ZNF703Q9H7S9 590 aaPredicted RBP6.62□□□□□ -1.35
SNX13-208ENST00000482558 ACKR4Q9NPB9 350 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 CA10Q9NS85 328 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 ZNF319Q9P2F9 582 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 NOP16Q9Y3C1 178 aaKnown RBP6.62□□□□□ -1.35
SNX13-208ENST00000482558 TECTAO75443 2155 aa6.62□□□□□ -1.35
SNX13-208ENST00000482558 COL27A1Q8IZC6 1860 aaPredicted RBP6.62□□□□□ -1.35
SNX13-208ENST00000482558 KIAA1549Q9HCM3 1950 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 ZNF816-ZNF321PA0A0X1KG74 233 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 A1L4Q6 167 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 C9orf170A2RU37 121 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 OR5H14A6NHG9 310 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 FOXI3A8MTJ6 420 aaPredicted RBP6.61□□□□□ -1.35
SNX13-208ENST00000482558 CDX4O14627 284 aaPredicted RBP6.61□□□□□ -1.35
SNX13-208ENST00000482558 NME2P1O60361 137 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 LRP3O75074 770 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 NEURL1O76050 574 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 TOXO94900 526 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 NRASP01111 189 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 S100A6P06703 90 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 DANCRP0C864 163 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 ZNF35P13682 527 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 ZNF708P17019 499 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 ZNF32P17041 273 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 BLVRBP30043 206 aaPredicted RBP6.61□□□□□ -1.35
SNX13-208ENST00000482558 LHX2P50458 406 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 TMEM50BP56557 158 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 H2BFSP57053 126 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 RPS18P62269 152 aaKnown RBP6.61□□□□□ -1.35
SNX13-208ENST00000482558 FOXL1Q12952 345 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 EXOSC2Q13868 293 aaKnown RBP6.61□□□□□ -1.35
SNX13-208ENST00000482558 RSU1Q15404 277 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 OR8B8Q15620 311 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 UBE2V2Q15819 145 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 RSPO1Q2MKA7 263 aaPredicted RBP6.61□□□□□ -1.35
SNX13-208ENST00000482558 CEACAM16Q2WEN9 425 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 CHRFAM7AQ494W8 412 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 NHLRC3Q5JS37 347 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 TMEM268Q5VZI3 342 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 NCR3LG1Q68D85 454 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 GSG1LQ6UXU4 331 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 CCDC36Q8IYA8 594 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 SAXO1Q8IYX7 474 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 LINC00469Q8N7U9 141 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 TMEM178AQ8NBL3 297 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 INO80EQ8NBZ0 244 aaPredicted RBP6.61□□□□□ -1.35
SNX13-208ENST00000482558 TMEM104Q8NE00 496 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 CSNK2A3Q8NEV1 391 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 OR5AP2Q8NGF4 316 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 THAP6Q8TBB0 222 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 NUDCD2Q8WVJ2 157 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 ARHGAP5-AS1Q96IT6 56 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 NEU1Q99519 415 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 PECRQ9BY49 303 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 PRRG4Q9BZD6 226 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 NMES1Q9C002 83 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 MFFQ9GZY8 342 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 ARL6Q9H0F7 186 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 RHOFQ9HBH0 211 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 TMEM165Q9HC07 324 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 RAB18Q9NP72 206 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 DEPPQ9NTK1 212 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 PLEKHJ1Q9NW61 149 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 C11orf21Q9P2W6 132 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 VSIG4Q9Y279 399 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 MEMO1Q9Y316 297 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 TRIOO75962 3097 aa6.61□□□□□ -1.35
SNX13-208ENST00000482558 FXYD6-FXYD2A0A087WZ82 144 aa6.6□□□□□ -1.35
SNX13-208ENST00000482558 A0A0G2JMM0 328 aa6.6□□□□□ -1.35
SNX13-208ENST00000482558 A0A1W2PPB8 328 aa6.6□□□□□ -1.35
SNX13-208ENST00000482558 KANTRA0A1W2PQU2 76 aa6.6□□□□□ -1.35
SNX13-208ENST00000482558 A0A1W2PRS3 328 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms