RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 SLC25A28Q96A46 364 aa13.36□□□□□ -0.27
CCDC78-212ENST00000482152 ZNF48Q96MX3 618 aaPredicted RBP13.36□□□□□ -0.27
CCDC78-212ENST00000482152 MDFIQ99750 246 aa13.36□□□□□ -0.27
CCDC78-212ENST00000482152 POMT1Q9Y6A1 747 aa13.36□□□□□ -0.27
CCDC78-212ENST00000482152 TRAV1-2A0A0B4J238 106 aa13.35□□□□□ -0.27
CCDC78-212ENST00000482152 ODAMA1E959 279 aa13.35□□□□□ -0.27
CCDC78-212ENST00000482152 PDCD5O14737 125 aa13.35□□□□□ -0.27
CCDC78-212ENST00000482152 GEMIN2O14893 280 aaKnown RBP13.35□□□□□ -0.27
CCDC78-212ENST00000482152 SLC22A1O15245 554 aa13.35□□□□□ -0.27
CCDC78-212ENST00000482152 TNFAIP8O95379 198 aa13.35□□□□□ -0.27
CCDC78-212ENST00000482152 BPNT1O95861 308 aa13.35□□□□□ -0.27
CCDC78-212ENST00000482152 FBP1P09467 338 aa13.35□□□□□ -0.27
CCDC78-212ENST00000482152 IGHV1-8P0DP01 117 aa13.35□□□□□ -0.27
CCDC78-212ENST00000482152 CALRP27797 417 aaKnown RBP13.35□□□□□ -0.27
CCDC78-212ENST00000482152 HTR2CP28335 458 aa13.35□□□□□ -0.27
CCDC78-212ENST00000482152 GLIPR1P48060 266 aa13.35□□□□□ -0.27
CCDC78-212ENST00000482152 UBA52P62987 128 aaKnown RBP13.35□□□□□ -0.27
CCDC78-212ENST00000482152 RBM39Q14498 530 aaKnown RBP13.35□□□□□ -0.27
CCDC78-212ENST00000482152 KRTAP24-1Q3LI83 254 aa13.35□□□□□ -0.27
CCDC78-212ENST00000482152 TRAPPC6BQ86SZ2 158 aa13.35□□□□□ -0.27
CCDC78-212ENST00000482152 PIP4P2Q8N4L2 257 aa13.35□□□□□ -0.27
CCDC78-212ENST00000482152 SPATA3Q8NHX4 192 aa13.35□□□□□ -0.27
CCDC78-212ENST00000482152 KCNG3Q8TAE7 436 aa13.35□□□□□ -0.27
CCDC78-212ENST00000482152 C1orf147Q96MC9 270 aaPredicted RBP13.35□□□□□ -0.27
CCDC78-212ENST00000482152 NKX3-1Q99801 234 aaPredicted RBP13.35□□□□□ -0.27
CCDC78-212ENST00000482152 DPCDQ9BVM2 203 aaPredicted RBP13.35□□□□□ -0.27
CCDC78-212ENST00000482152 FBN1P35555 2871 aaKnown RBP13.34□□□□□ -0.27
CCDC78-212ENST00000482152 CRTAPO75718 401 aaPredicted RBP13.34□□□□□ -0.27
CCDC78-212ENST00000482152 MGMTP16455 207 aa13.34□□□□□ -0.27
CCDC78-212ENST00000482152 GZMHP20718 246 aa13.34□□□□□ -0.27
CCDC78-212ENST00000482152 PSMB9P28065 219 aa13.34□□□□□ -0.27
CCDC78-212ENST00000482152 LGALS4P56470 323 aa13.34□□□□□ -0.27
CCDC78-212ENST00000482152 SYT6Q5T7P8 510 aaPredicted RBP13.34□□□□□ -0.27
CCDC78-212ENST00000482152 SLC35E4Q6ICL7 350 aa13.34□□□□□ -0.27
CCDC78-212ENST00000482152 HCP5Q6MZN7 132 aa13.34□□□□□ -0.27
CCDC78-212ENST00000482152 HEPN1Q6WQI6 88 aa13.34□□□□□ -0.27
CCDC78-212ENST00000482152 LDLRAD3Q86YD5 345 aa13.34□□□□□ -0.27
CCDC78-212ENST00000482152 TPRX1Q8N7U7 411 aa13.34□□□□□ -0.27
CCDC78-212ENST00000482152 SUMF2Q8NBJ7 301 aa13.34□□□□□ -0.27
CCDC78-212ENST00000482152 OR11H6Q8NGC7 330 aa13.34□□□□□ -0.27
CCDC78-212ENST00000482152 SSMEM1Q8WWF3 244 aa13.34□□□□□ -0.27
CCDC78-212ENST00000482152 COQ2Q96H96 371 aa13.34□□□□□ -0.27
CCDC78-212ENST00000482152 C19orf24Q9BVV8 132 aa13.34□□□□□ -0.27
CCDC78-212ENST00000482152 DPAGT1Q9H3H5 408 aa13.34□□□□□ -0.27
CCDC78-212ENST00000482152 ESM1Q9NQ30 184 aa13.34□□□□□ -0.27
CCDC78-212ENST00000482152 SESN1Q9Y6P5 492 aa13.34□□□□□ -0.27
CCDC78-212ENST00000482152 A0A0U1RQK1 487 aa13.33□□□□□ -0.28
CCDC78-212ENST00000482152 MEIOCA2RUB1 952 aa13.33□□□□□ -0.28
CCDC78-212ENST00000482152 DNAJC9-AS1A6NH13 148 aa13.33□□□□□ -0.28
CCDC78-212ENST00000482152 ZNF729A6NN14 1252 aaPredicted RBP13.33□□□□□ -0.28
CCDC78-212ENST00000482152 MCRIP1C9JLW8 97 aa13.33□□□□□ -0.28
CCDC78-212ENST00000482152 SLC17A2O00624 439 aa13.33□□□□□ -0.28
CCDC78-212ENST00000482152 CA11O75493 328 aa13.33□□□□□ -0.28
CCDC78-212ENST00000482152 PAHP00439 452 aa13.33□□□□□ -0.28
CCDC78-212ENST00000482152 RNASE1P07998 156 aaKnown RBP13.33□□□□□ -0.28
CCDC78-212ENST00000482152 FUT3P21217 361 aa13.33□□□□□ -0.28
CCDC78-212ENST00000482152 MYL9P24844 172 aa13.33□□□□□ -0.28
CCDC78-212ENST00000482152 FGF9P31371 208 aaPredicted RBP13.33□□□□□ -0.28
CCDC78-212ENST00000482152 SAA4P35542 130 aa13.33□□□□□ -0.28
CCDC78-212ENST00000482152 KLRD1Q13241 179 aa13.33□□□□□ -0.28
CCDC78-212ENST00000482152 ATXN7L3Q14CW9 347 aaPredicted RBP13.33□□□□□ -0.28
CCDC78-212ENST00000482152 SLC9A3R2Q15599 337 aa13.33□□□□□ -0.28
CCDC78-212ENST00000482152 TAF9Q16594 264 aa13.33□□□□□ -0.28
CCDC78-212ENST00000482152 ATAD3CQ5T2N8 411 aa13.33□□□□□ -0.28
CCDC78-212ENST00000482152 TCF23Q7RTU1 214 aa13.33□□□□□ -0.28
CCDC78-212ENST00000482152 PDZD9Q8IXQ8 264 aa13.33□□□□□ -0.28
CCDC78-212ENST00000482152 Q96M66 194 aa13.33□□□□□ -0.28
CCDC78-212ENST00000482152 SELENOIQ9C0D9 397 aa13.33□□□□□ -0.28
CCDC78-212ENST00000482152 PLGRKTQ9HBL7 147 aa13.33□□□□□ -0.28
CCDC78-212ENST00000482152 RCC2Q9P258 522 aaKnown RBP13.33□□□□□ -0.28
CCDC78-212ENST00000482152 V9GY05 133 aa13.33□□□□□ -0.28
CCDC78-212ENST00000482152 ATRQ13535 2644 aa13.33□□□□□ -0.28
CCDC78-212ENST00000482152 A0A087WXM4 84 aa13.32□□□□□ -0.28
CCDC78-212ENST00000482152 MEIKINA0A087WXM9 373 aa13.32□□□□□ -0.28
CCDC78-212ENST00000482152 KBTBD11-OT1A0A1B0GTJ5 212 aa13.32□□□□□ -0.28
CCDC78-212ENST00000482152 A0A1W2PP11 408 aa13.32□□□□□ -0.28
CCDC78-212ENST00000482152 CLPXO76031 633 aa13.32□□□□□ -0.28
CCDC78-212ENST00000482152 MELTFP08582 738 aa13.32□□□□□ -0.28
CCDC78-212ENST00000482152 RPL15P61313 204 aaKnown RBP13.32□□□□□ -0.28
CCDC78-212ENST00000482152 AANATQ16613 207 aa13.32□□□□□ -0.28
CCDC78-212ENST00000482152 RSBN1Q5VWQ0 802 aaPredicted RBP13.32□□□□□ -0.28
CCDC78-212ENST00000482152 C16orf87Q6PH81 154 aa13.32□□□□□ -0.28
CCDC78-212ENST00000482152 OR2W3Q7Z3T1 314 aa13.32□□□□□ -0.28
CCDC78-212ENST00000482152 RTN4RL2Q86UN3 420 aa13.32□□□□□ -0.28
CCDC78-212ENST00000482152 PNKDQ8N490 385 aa13.32□□□□□ -0.28
CCDC78-212ENST00000482152 TMEM104Q8NE00 496 aa13.32□□□□□ -0.28
CCDC78-212ENST00000482152 OR10A7Q8NGE5 316 aa13.32□□□□□ -0.28
CCDC78-212ENST00000482152 MEGF9Q9H1U4 602 aa13.32□□□□□ -0.28
CCDC78-212ENST00000482152 TMEM133Q9H2Q1 129 aa13.32□□□□□ -0.28
CCDC78-212ENST00000482152 BANF2Q9H503 90 aa13.32□□□□□ -0.28
CCDC78-212ENST00000482152 LINC00574Q9H8X3 128 aa13.32□□□□□ -0.28
CCDC78-212ENST00000482152 VCX3AQ9NNX9 186 aa13.32□□□□□ -0.28
CCDC78-212ENST00000482152 STUB1Q9UNE7 303 aa13.32□□□□□ -0.28
CCDC78-212ENST00000482152 SSR3Q9UNL2 185 aa13.32□□□□□ -0.28
CCDC78-212ENST00000482152 TBL2Q9Y4P3 447 aaKnown RBP13.32□□□□□ -0.28
CCDC78-212ENST00000482152 SOX21Q9Y651 276 aaPredicted RBP13.32□□□□□ -0.28
CCDC78-212ENST00000482152 TMEM30CPA0ZSE6 113 aa13.31□□□□□ -0.28
CCDC78-212ENST00000482152 HSPB6O14558 160 aa13.31□□□□□ -0.28
CCDC78-212ENST00000482152 HOXA3O43365 443 aaPredicted RBP13.31□□□□□ -0.28
CCDC78-212ENST00000482152 CGB3P0DN86 165 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms