RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 OR3A4PP47883 348 aa18.87■□□□□ 0.61
C9orf3-215ENST00000478473 SCN1BQ07699 218 aa18.87■□□□□ 0.61
C9orf3-215ENST00000478473 DYNC1I2Q13409 638 aaKnown RBP18.87■□□□□ 0.61
C9orf3-215ENST00000478473 RIPK1Q13546 671 aa18.87■□□□□ 0.61
C9orf3-215ENST00000478473 FAM189A2Q15884 450 aa18.87■□□□□ 0.61
C9orf3-215ENST00000478473 DDI2Q5TDH0 399 aa18.87■□□□□ 0.61
C9orf3-215ENST00000478473 SATL1Q86VE3 508 aa18.87■□□□□ 0.61
C9orf3-215ENST00000478473 CDH26Q8IXH8 852 aa18.87■□□□□ 0.61
C9orf3-215ENST00000478473 ABHD12Q8N2K0 398 aa18.87■□□□□ 0.61
C9orf3-215ENST00000478473 OR13C5Q8NGS8 318 aa18.87■□□□□ 0.61
C9orf3-215ENST00000478473 ZNF596Q8TC21 504 aa18.87■□□□□ 0.61
C9orf3-215ENST00000478473 PPIL3Q9H2H8 161 aaKnown RBP18.87■□□□□ 0.61
C9orf3-215ENST00000478473 KBTBD11-OT1A0A1B0GTJ5 212 aa18.86■□□□□ 0.61
C9orf3-215ENST00000478473 C21orf33P30042 268 aaPredicted RBP18.86■□□□□ 0.61
C9orf3-215ENST00000478473 GDNFP39905 211 aa18.86■□□□□ 0.61
C9orf3-215ENST00000478473 RSU1Q15404 277 aa18.86■□□□□ 0.61
C9orf3-215ENST00000478473 PRAMEF5Q5TYX0 476 aa18.86■□□□□ 0.61
C9orf3-215ENST00000478473 NANOGP1Q8N7R0 232 aa18.86■□□□□ 0.61
C9orf3-215ENST00000478473 VCXQ9H320 206 aa18.86■□□□□ 0.61
C9orf3-215ENST00000478473 TCF7L1Q9HCS4 588 aa18.86■□□□□ 0.61
C9orf3-215ENST00000478473 ABCB10Q9NRK6 738 aa18.86■□□□□ 0.61
C9orf3-215ENST00000478473 PAK1IP1Q9NWT1 392 aaPredicted RBP18.86■□□□□ 0.61
C9orf3-215ENST00000478473 DPM3Q9P2X0 92 aa18.86■□□□□ 0.61
C9orf3-215ENST00000478473 ANKRD65E5RJM6 399 aa18.85■□□□□ 0.61
C9orf3-215ENST00000478473 ZNF780AO75290 641 aaPredicted RBP18.85■□□□□ 0.61
C9orf3-215ENST00000478473 RAB13P51153 203 aa18.85■□□□□ 0.61
C9orf3-215ENST00000478473 WNT4P56705 351 aa18.85■□□□□ 0.61
C9orf3-215ENST00000478473 DOC2BQ14184 412 aa18.85■□□□□ 0.61
C9orf3-215ENST00000478473 ATXN7L3Q14CW9 347 aaPredicted RBP18.85■□□□□ 0.61
C9orf3-215ENST00000478473 PIGYQ3MUY2 71 aa18.85■□□□□ 0.61
C9orf3-215ENST00000478473 PAN3Q58A45 887 aaKnown RBP18.85■□□□□ 0.61
C9orf3-215ENST00000478473 RSBN1Q5VWQ0 802 aaPredicted RBP18.85■□□□□ 0.61
C9orf3-215ENST00000478473 BAIAP2L2Q6UXY1 529 aa18.85■□□□□ 0.61
C9orf3-215ENST00000478473 LINC00596Q86U02 117 aa18.85■□□□□ 0.61
C9orf3-215ENST00000478473 LYPD6Q86Y78 171 aa18.85■□□□□ 0.61
C9orf3-215ENST00000478473 ZNF565Q8N9K5 539 aa18.85■□□□□ 0.61
C9orf3-215ENST00000478473 OR2T6Q8NHC8 308 aa18.85■□□□□ 0.61
C9orf3-215ENST00000478473 CFHR4Q92496 578 aa18.85■□□□□ 0.61
C9orf3-215ENST00000478473 BARHL1Q9BZE3 327 aa18.85■□□□□ 0.61
C9orf3-215ENST00000478473 METTL9Q9H1A3 318 aa18.85■□□□□ 0.61
C9orf3-215ENST00000478473 MMP27Q9H306 513 aa18.85■□□□□ 0.61
C9orf3-215ENST00000478473 FOXJ3Q9UPW0 622 aa18.85■□□□□ 0.61
C9orf3-215ENST00000478473 TRAV8-7A0A075B6U6 113 aa18.84■□□□□ 0.61
C9orf3-215ENST00000478473 NPIPB11E5RHQ5 1161 aa18.84■□□□□ 0.61
C9orf3-215ENST00000478473 CDRT1O95170 752 aa18.84■□□□□ 0.61
C9orf3-215ENST00000478473 RBM11P57052 281 aaKnown RBP18.84■□□□□ 0.61
C9orf3-215ENST00000478473 SLC34A1Q06495 639 aa18.84■□□□□ 0.61
C9orf3-215ENST00000478473 AHSA2Q719I0 299 aa18.84■□□□□ 0.61
C9orf3-215ENST00000478473 OSR2Q8N2R0 312 aa18.84■□□□□ 0.61
C9orf3-215ENST00000478473 ZFP41Q8N8Y5 198 aa18.84■□□□□ 0.61
C9orf3-215ENST00000478473 OR4D6Q8NGJ1 314 aa18.84■□□□□ 0.61
C9orf3-215ENST00000478473 OR10K1Q8NGX5 313 aa18.84■□□□□ 0.61
C9orf3-215ENST00000478473 CREB3L1Q96BA8 519 aa18.84■□□□□ 0.61
C9orf3-215ENST00000478473 ORAI1Q96D31 301 aa18.84■□□□□ 0.61
C9orf3-215ENST00000478473 NR1H4Q96RI1 486 aaPredicted RBP18.84■□□□□ 0.61
C9orf3-215ENST00000478473 ZNF184Q99676 751 aaPredicted RBP18.84■□□□□ 0.61
C9orf3-215ENST00000478473 FAM192AQ9GZU8 254 aa18.84■□□□□ 0.61
C9orf3-215ENST00000478473 ZNF702PQ9H963 129 aa18.84■□□□□ 0.61
C9orf3-215ENST00000478473 ZNF286AQ9HBT8 521 aa18.84■□□□□ 0.61
C9orf3-215ENST00000478473 PCDHB16Q9NRJ7 776 aa18.84■□□□□ 0.61
C9orf3-215ENST00000478473 NKX1-2Q9UD57 310 aaPredicted RBP18.84■□□□□ 0.61
C9orf3-215ENST00000478473 ST3GAL6Q9Y274 331 aa18.84■□□□□ 0.61
C9orf3-215ENST00000478473 LY6LH3BQJ8 138 aa18.83■□□□□ 0.6
C9orf3-215ENST00000478473 HTR3BO95264 441 aa18.83■□□□□ 0.6
C9orf3-215ENST00000478473 HERPUD1Q15011 391 aa18.83■□□□□ 0.6
C9orf3-215ENST00000478473 MPV17LQ2QL34 196 aa18.83■□□□□ 0.6
C9orf3-215ENST00000478473 STX19Q8N4C7 294 aa18.83■□□□□ 0.6
C9orf3-215ENST00000478473 BPIFB6Q8NFQ5 453 aa18.83■□□□□ 0.6
C9orf3-215ENST00000478473 OR10A7Q8NGE5 316 aa18.83■□□□□ 0.6
C9orf3-215ENST00000478473 NDNFQ8TB73 568 aa18.83■□□□□ 0.6
C9orf3-215ENST00000478473 WIPF2Q8TF74 440 aaPredicted RBP18.83■□□□□ 0.6
C9orf3-215ENST00000478473 THRSPQ92748 146 aa18.83■□□□□ 0.6
C9orf3-215ENST00000478473 KIRREL1Q96J84 757 aa18.83■□□□□ 0.6
C9orf3-215ENST00000478473 DERL3Q96Q80 235 aa18.83■□□□□ 0.6
C9orf3-215ENST00000478473 SERTAD4Q9NUC0 356 aa18.83■□□□□ 0.6
C9orf3-215ENST00000478473 CKLFQ9UBR5 152 aa18.83■□□□□ 0.6
C9orf3-215ENST00000478473 KIF25Q9UIL4 384 aa18.83■□□□□ 0.6
C9orf3-215ENST00000478473 SIGLEC9Q9Y336 463 aa18.83■□□□□ 0.6
C9orf3-215ENST00000478473 HILPDAQ9Y5L2 63 aa18.83■□□□□ 0.6
C9orf3-215ENST00000478473 MAGEA13PA6NCF6 341 aa18.82■□□□□ 0.6
C9orf3-215ENST00000478473 LEUTXA8MZ59 168 aa18.82■□□□□ 0.6
C9orf3-215ENST00000478473 HLA-DRB5Q30154 266 aa18.82■□□□□ 0.6
C9orf3-215ENST00000478473 PLA1AQ53H76 456 aa18.82■□□□□ 0.6
C9orf3-215ENST00000478473 SLC16A12Q6ZSM3 486 aa18.82■□□□□ 0.6
C9orf3-215ENST00000478473 OR13A1Q8NGR1 328 aa18.82■□□□□ 0.6
C9orf3-215ENST00000478473 PLPPR1Q8TBJ4 325 aa18.82■□□□□ 0.6
C9orf3-215ENST00000478473 MRPS24Q96EL2 167 aaKnown RBP18.82■□□□□ 0.6
C9orf3-215ENST00000478473 OR14A2Q96R54 314 aa18.82■□□□□ 0.6
C9orf3-215ENST00000478473 NKX3-1Q99801 234 aaPredicted RBP18.82■□□□□ 0.6
C9orf3-215ENST00000478473 ING4Q9UNL4 249 aa18.82■□□□□ 0.6
C9orf3-215ENST00000478473 MEIKINA0A087WXM9 373 aa18.81■□□□□ 0.6
C9orf3-215ENST00000478473 OOSP1A8MZH6 123 aa18.81■□□□□ 0.6
C9orf3-215ENST00000478473 MYL12BO14950 172 aa18.81■□□□□ 0.6
C9orf3-215ENST00000478473 PIN1P1O15428 100 aa18.81■□□□□ 0.6
C9orf3-215ENST00000478473 IL1AP01583 271 aa18.81■□□□□ 0.6
C9orf3-215ENST00000478473 CSTBP04080 98 aaKnown RBP18.81■□□□□ 0.6
C9orf3-215ENST00000478473 CDK1P06493 297 aa18.81■□□□□ 0.6
C9orf3-215ENST00000478473 CELP19835 753 aa18.81■□□□□ 0.6
C9orf3-215ENST00000478473 GPR176Q14439 515 aa18.81■□□□□ 0.6
C9orf3-215ENST00000478473 C6orf141Q5SZD1 244 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms