RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 SYT6Q5T7P8 510 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-222ENST00000478095 SIGLECL1Q8N7X8 197 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 SUMF2Q8NBJ7 301 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 OR6M1Q8NGM8 313 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 PLPPR1Q8TBJ4 325 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 ZNF418Q8TF45 676 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-222ENST00000478095 TNFRSF14Q92956 283 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 FOXRED1Q96CU9 486 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-222ENST00000478095 DMRTB1Q96MA1 342 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 ZNF48Q96MX3 618 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-222ENST00000478095 ZNF714Q96N38 554 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 DUX5Q96PT3 197 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 DPCDQ9BVM2 203 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-222ENST00000478095 OR51E2Q9H255 320 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 ZNF696Q9H7X3 374 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 PCDHB16Q9NRJ7 776 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 STUB1Q9UNE7 303 aa8.41□□□□□ -1.06
HDAC6-222ENST00000478095 TRGV10A0A0A0MS01 117 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 TRAV39A0A0B4J263 110 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 A0A0U1RQK1 487 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 LOC100506127A0A0U1RQW1 187 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 ODAMA1E959 279 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 CSN2P05814 226 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 ZNF728P0DKX0 622 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 CD36P16671 472 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 PRTN3P24158 256 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 GADD45AP24522 165 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 ERP29P30040 261 aaKnown RBP8.4□□□□□ -1.06
HDAC6-222ENST00000478095 MEF2CQ06413 473 aaPredicted RBP8.4□□□□□ -1.06
HDAC6-222ENST00000478095 RAB11BQ15907 218 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 MPV17LQ2QL34 196 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 DEFB112Q30KQ8 113 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 HES5Q5TA89 166 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 HCP5Q6MZN7 132 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 C1orf122Q6ZSJ8 110 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 C9orf139Q6ZV77 190 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 LINC00596Q86U02 117 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 C11orf42Q8N5U0 333 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 Q96M66 194 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 CHCHD6Q9BRQ6 235 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 SUCNR1Q9BXA5 334 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 CST11Q9H112 138 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 RNF167Q9H6Y7 350 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 TXNL4BQ9NX01 149 aaKnown RBP8.4□□□□□ -1.06
HDAC6-222ENST00000478095 GHRLQ9UBU3 117 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 KIF25Q9UIL4 384 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 LINC00312Q9Y6C7 94 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 V9GY05 133 aa8.4□□□□□ -1.06
HDAC6-222ENST00000478095 MEIKINA0A087WXM9 373 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 TRAV1-2A0A0B4J238 106 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 FUOMA2VDF0 154 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 C17orf98A8MV24 154 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 SLC17A2O00624 439 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 PDCD5O14737 125 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 NPFFO15130 113 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 MMP23AO75900 390 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 UBBP0CG47 229 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 GALP22466 123 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 OMGP23515 440 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 GLP1RP43220 463 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 HILS1P60008 231 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 UNC119Q13432 240 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 NKAPLQ5M9Q1 402 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 PRAMEF5Q5TYX0 476 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 RSBN1Q5VWQ0 802 aaPredicted RBP8.39□□□□□ -1.07
HDAC6-222ENST00000478095 NCR3LG1Q68D85 454 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 RBMS3Q6XE24 437 aaKnown RBP8.39□□□□□ -1.07
HDAC6-222ENST00000478095 NR2C2APQ86WQ0 139 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 NEK7Q8TDX7 302 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 DYRK2Q92630 601 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 SLC25A28Q96A46 364 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 NICN1Q9BSH3 213 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 TMEM59Q9BXS4 323 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 IFT22Q9H7X7 185 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 UNKLQ9H9P5 680 aaKnown RBP8.39□□□□□ -1.07
HDAC6-222ENST00000478095 VCX3AQ9NNX9 186 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 ESM1Q9NQ30 184 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 TNFRSF19Q9NS68 423 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 SSR3Q9UNL2 185 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 WNK2Q9Y3S1 2297 aa8.39□□□□□ -1.07
HDAC6-222ENST00000478095 A0A0B4J203 849 aa8.38□□□□□ -1.07
HDAC6-222ENST00000478095 hCG_1809904A0A1W2PP81 198 aa8.38□□□□□ -1.07
HDAC6-222ENST00000478095 A0A1W2PPE2 198 aa8.38□□□□□ -1.07
HDAC6-222ENST00000478095 A0A1W2PR64 198 aa8.38□□□□□ -1.07
HDAC6-222ENST00000478095 A0A1W2PRV1 198 aa8.38□□□□□ -1.07
HDAC6-222ENST00000478095 UBE2QL1A1L167 161 aa8.38□□□□□ -1.07
HDAC6-222ENST00000478095 FAM172BPA6NC97 362 aa8.38□□□□□ -1.07
HDAC6-222ENST00000478095 TMEM14DPA8MWL7 114 aa8.38□□□□□ -1.07
HDAC6-222ENST00000478095 CLPXO76031 633 aa8.38□□□□□ -1.07
HDAC6-222ENST00000478095 BPNT1O95861 308 aa8.38□□□□□ -1.07
HDAC6-222ENST00000478095 SMIM18P0DKX4 95 aa8.38□□□□□ -1.07
HDAC6-222ENST00000478095 IGHV1-8P0DP01 117 aa8.38□□□□□ -1.07
HDAC6-222ENST00000478095 CD37P11049 281 aa8.38□□□□□ -1.07
HDAC6-222ENST00000478095 ARSBP15848 533 aa8.38□□□□□ -1.07
HDAC6-222ENST00000478095 RAB3BP20337 219 aa8.38□□□□□ -1.07
HDAC6-222ENST00000478095 FGF9P31371 208 aaPredicted RBP8.38□□□□□ -1.07
HDAC6-222ENST00000478095 SAA4P35542 130 aa8.38□□□□□ -1.07
HDAC6-222ENST00000478095 GDNFP39905 211 aa8.38□□□□□ -1.07
HDAC6-222ENST00000478095 UBE2E1P51965 193 aa8.38□□□□□ -1.07
HDAC6-222ENST00000478095 RPS27AP62979 156 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms