RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 CATSPERDQ86XM0 798 aa7.57□□□□□ -1.2
COL4A5-204ENST00000477429 SLC35F2Q8IXU6 374 aa7.57□□□□□ -1.2
COL4A5-204ENST00000477429 COMMD1Q8N668 190 aa7.57□□□□□ -1.2
COL4A5-204ENST00000477429 OR11H1Q8NG94 326 aa7.57□□□□□ -1.2
COL4A5-204ENST00000477429 RFESDQ8TAC1 157 aa7.57□□□□□ -1.2
COL4A5-204ENST00000477429 MYOZ3Q8TDC0 251 aa7.57□□□□□ -1.2
COL4A5-204ENST00000477429 GATAD1Q8WUU5 269 aa7.57□□□□□ -1.2
COL4A5-204ENST00000477429 C4orf3Q8WVX3 66 aa7.57□□□□□ -1.2
COL4A5-204ENST00000477429 ASB17Q8WXJ9 295 aa7.57□□□□□ -1.2
COL4A5-204ENST00000477429 DCUN1D4Q92564 292 aa7.57□□□□□ -1.2
COL4A5-204ENST00000477429 RPEQ96AT9 228 aa7.57□□□□□ -1.2
COL4A5-204ENST00000477429 TBX5Q99593 518 aa7.57□□□□□ -1.2
COL4A5-204ENST00000477429 CHST5Q9GZS9 411 aa7.57□□□□□ -1.2
COL4A5-204ENST00000477429 GAL3ST2Q9H3Q3 398 aa7.57□□□□□ -1.2
COL4A5-204ENST00000477429 SLC25A19Q9HC21 320 aa7.57□□□□□ -1.2
COL4A5-204ENST00000477429 ZNF446Q9NWS9 450 aa7.57□□□□□ -1.2
COL4A5-204ENST00000477429 TVP23BQ9NYZ1 205 aa7.57□□□□□ -1.2
COL4A5-204ENST00000477429 ACTR3BQ9P1U1 418 aa7.57□□□□□ -1.2
COL4A5-204ENST00000477429 KBTBD11-OT1A0A1B0GTJ5 212 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 DHRS7CA6NNS2 312 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 OOSP1A8MZH6 123 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 HSPB6O14558 160 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 APOL3O95236 402 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 IGHG4P01861 327 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 PSMB8P28062 276 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 EPHA2P29317 976 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 PTGFRP43088 359 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 PRRX1P54821 245 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 GP2P55259 537 aaKnown RBP7.56□□□□□ -1.2
COL4A5-204ENST00000477429 SLC35B1P78383 322 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 FOXE3Q13461 319 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 KRBOX4Q5JUW0 171 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 Q8N1Y9 231 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 OR5D18Q8NGL1 313 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 OR10AC1Q8NH08 325 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 OR9G1Q8NH87 305 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 PLPPR1Q8TBJ4 325 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 BORCS8Q96FH0 119 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 CYYR1Q96J86 154 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 COMMD4Q9H0A8 199 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 ABCG5Q9H222 651 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 MAGIXQ9H6Y5 334 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 EXOSC4Q9NPD3 245 aaKnown RBP7.56□□□□□ -1.2
COL4A5-204ENST00000477429 ISYNA1Q9NPH2 558 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 CALYQ9NYX4 217 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 KIAA1456Q9P272 454 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 KIF25Q9UIL4 384 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 SNX5Q9Y5X3 404 aa7.56□□□□□ -1.2
COL4A5-204ENST00000477429 LOC107986453A0A1B0GWG9 222 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 ZNF729A6NN14 1252 aaPredicted RBP7.55□□□□□ -1.2
COL4A5-204ENST00000477429 AP4M1O00189 453 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 SYT7O43581 403 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 E2F6O75461 281 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 HTR3BO95264 441 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 HMGN1P05114 100 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 GSTP1P09211 210 aaKnown RBP7.55□□□□□ -1.2
COL4A5-204ENST00000477429 SSTR5P35346 364 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 ARHGDIBP52566 201 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 SLURP1P55000 103 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 F2RL1P55085 397 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 EFNB1P98172 346 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 PDZK1IP1Q13113 114 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 AADACL4Q5VUY2 407 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 CCDC144NLQ6NUI1 221 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 FOXRED2Q8IWF2 684 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 ENTHD1Q8IYW4 607 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 ADGRG5Q8IZF4 528 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 TMEM104Q8NE00 496 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 OR4D6Q8NGJ1 314 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 OR1N2Q8NGR9 330 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 UBALD1Q8TB05 177 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 DLX4Q92988 240 aaPredicted RBP7.55□□□□□ -1.2
COL4A5-204ENST00000477429 RNFT2Q96EX2 444 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 CNN2Q99439 309 aaKnown RBP7.55□□□□□ -1.2
COL4A5-204ENST00000477429 OSBPL10Q9BXB5 764 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 MOB1AQ9H8S9 216 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 MYRFQ9Y2G1 1151 aa7.55□□□□□ -1.2
COL4A5-204ENST00000477429 TRAV24A0A0B4J272 114 aa7.54□□□□□ -1.2
COL4A5-204ENST00000477429 IGHV1-3A0A0C4DH29 117 aa7.54□□□□□ -1.2
COL4A5-204ENST00000477429 A0A1W2PQL4 384 aaPredicted RBP7.54□□□□□ -1.2
COL4A5-204ENST00000477429 MAGEA13PA6NCF6 341 aa7.54□□□□□ -1.2
COL4A5-204ENST00000477429 NCBP2LA6PVI3 153 aaKnown RBP7.54□□□□□ -1.2
COL4A5-204ENST00000477429 NPIPB11E5RHQ5 1161 aa7.54□□□□□ -1.2
COL4A5-204ENST00000477429 G3V318 75 aa7.54□□□□□ -1.2
COL4A5-204ENST00000477429 HSD17B6O14756 317 aa7.54□□□□□ -1.2
COL4A5-204ENST00000477429 SH2D1BO14796 132 aa7.54□□□□□ -1.2
COL4A5-204ENST00000477429 MITFO75030 526 aaPredicted RBP7.54□□□□□ -1.2
COL4A5-204ENST00000477429 KDM4BO94953 1096 aa7.54□□□□□ -1.2
COL4A5-204ENST00000477429 CST1P01037 141 aa7.54□□□□□ -1.2
COL4A5-204ENST00000477429 CSN2P05814 226 aa7.54□□□□□ -1.2
COL4A5-204ENST00000477429 ELANEP08246 267 aa7.54□□□□□ -1.2
COL4A5-204ENST00000477429 GP9P14770 177 aa7.54□□□□□ -1.2
COL4A5-204ENST00000477429 ZNF44P15621 663 aa7.54□□□□□ -1.2
COL4A5-204ENST00000477429 ATF1P18846 271 aa7.54□□□□□ -1.2
COL4A5-204ENST00000477429 PPIFP30405 207 aaKnown RBP7.54□□□□□ -1.2
COL4A5-204ENST00000477429 GLP1RP43220 463 aa7.54□□□□□ -1.2
COL4A5-204ENST00000477429 MTCP1P56278 107 aa7.54□□□□□ -1.2
COL4A5-204ENST00000477429 CDC42P60953 191 aa7.54□□□□□ -1.2
COL4A5-204ENST00000477429 MADCAM1Q13477 382 aa7.54□□□□□ -1.2
COL4A5-204ENST00000477429 SRSF7Q16629 238 aaKnown RBP eCLIP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms