RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 IGKV1-9A0A0C4DH69 117 aa8.83□□□□□ -1
BRCA1-213ENST00000476777 IGKV1-12A0A0C4DH73 117 aa8.83□□□□□ -1
BRCA1-213ENST00000476777 I3L521 148 aa8.83□□□□□ -1
BRCA1-213ENST00000476777 SLC33A1O00400 549 aaPredicted RBP8.83□□□□□ -1
BRCA1-213ENST00000476777 RPP14O95059 124 aaKnown RBP8.83□□□□□ -1
BRCA1-213ENST00000476777 SERPINA3P01011 423 aa8.83□□□□□ -1
BRCA1-213ENST00000476777 IGKV1D-12P01611 117 aa8.83□□□□□ -1
BRCA1-213ENST00000476777 GP9P14770 177 aa8.83□□□□□ -1
BRCA1-213ENST00000476777 RBP2P50120 134 aa8.83□□□□□ -1
BRCA1-213ENST00000476777 MTCP1P56278 107 aa8.83□□□□□ -1
BRCA1-213ENST00000476777 PDZK1IP1Q13113 114 aa8.83□□□□□ -1
BRCA1-213ENST00000476777 KIAA0141Q14154 515 aaPredicted RBP8.83□□□□□ -1
BRCA1-213ENST00000476777 ATXN7L3Q14CW9 347 aaPredicted RBP8.83□□□□□ -1
BRCA1-213ENST00000476777 Q6P435 159 aa8.83□□□□□ -1
BRCA1-213ENST00000476777 CATSPERDQ86XM0 798 aa8.83□□□□□ -1
BRCA1-213ENST00000476777 SLC35F2Q8IXU6 374 aa8.83□□□□□ -1
BRCA1-213ENST00000476777 DEFB107AQ8IZN7 70 aa8.83□□□□□ -1
BRCA1-213ENST00000476777 CHST4Q8NCG5 386 aa8.83□□□□□ -1
BRCA1-213ENST00000476777 OSBPL10Q9BXB5 764 aa8.83□□□□□ -1
BRCA1-213ENST00000476777 LINC00574Q9H8X3 128 aa8.83□□□□□ -1
BRCA1-213ENST00000476777 ADGRL4Q9HBW9 690 aa8.83□□□□□ -1
BRCA1-213ENST00000476777 SLC25A19Q9HC21 320 aa8.83□□□□□ -1
BRCA1-213ENST00000476777 PLSCR3Q9NRY6 295 aa8.83□□□□□ -1
BRCA1-213ENST00000476777 CALYQ9NYX4 217 aa8.83□□□□□ -1
BRCA1-213ENST00000476777 TVP23BQ9NYZ1 205 aa8.83□□□□□ -1
BRCA1-213ENST00000476777 IGHV3-72A0A0B4J1Y9 119 aa8.82□□□□□ -1
BRCA1-213ENST00000476777 IGHV1-3A0A0C4DH29 117 aa8.82□□□□□ -1
BRCA1-213ENST00000476777 LDLRAD4O15165 306 aa8.82□□□□□ -1
BRCA1-213ENST00000476777 RRP9O43818 475 aaKnown RBP8.82□□□□□ -1
BRCA1-213ENST00000476777 MPZL2O60487 215 aa8.82□□□□□ -1
BRCA1-213ENST00000476777 JTBO76095 146 aa8.82□□□□□ -1
BRCA1-213ENST00000476777 KDM4BO94953 1096 aa8.82□□□□□ -1
BRCA1-213ENST00000476777 ZNF44P15621 663 aa8.82□□□□□ -1
BRCA1-213ENST00000476777 RUNX1Q01196 453 aa8.82□□□□□ -1
BRCA1-213ENST00000476777 SCN1BQ07699 218 aa8.82□□□□□ -1
BRCA1-213ENST00000476777 ZNF616Q08AN1 781 aa8.82□□□□□ -1
BRCA1-213ENST00000476777 BNIP1Q12981 228 aa8.82□□□□□ -1
BRCA1-213ENST00000476777 FAM98BQ52LJ0 330 aaKnown RBP8.82□□□□□ -1
BRCA1-213ENST00000476777 SSX6Q7RTT6 188 aa8.82□□□□□ -1
BRCA1-213ENST00000476777 BCDIN3DQ7Z5W3 292 aaKnown RBP8.82□□□□□ -1
BRCA1-213ENST00000476777 MOB3BQ86TA1 216 aa8.82□□□□□ -1
BRCA1-213ENST00000476777 IZUMO1Q8IYV9 350 aa8.82□□□□□ -1
BRCA1-213ENST00000476777 CCDC54Q8NEL0 328 aa8.82□□□□□ -1
BRCA1-213ENST00000476777 OR13A1Q8NGR1 328 aa8.82□□□□□ -1
BRCA1-213ENST00000476777 DCUN1D4Q92564 292 aa8.82□□□□□ -1
BRCA1-213ENST00000476777 C10orf35Q96D05 121 aa8.82□□□□□ -1
BRCA1-213ENST00000476777 KCTD7Q96MP8 289 aa8.82□□□□□ -1
BRCA1-213ENST00000476777 MNTQ99583 582 aa8.82□□□□□ -1
BRCA1-213ENST00000476777 HSPB9Q9BQS6 159 aa8.82□□□□□ -1
BRCA1-213ENST00000476777 TEX12Q9BXU0 123 aa8.82□□□□□ -1
BRCA1-213ENST00000476777 GNB4Q9HAV0 340 aa8.82□□□□□ -1
BRCA1-213ENST00000476777 IDI2-AS1Q9NZ38 188 aa8.82□□□□□ -1
BRCA1-213ENST00000476777 NPIPB11E5RHQ5 1161 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 ZNF670-ZNF695F2Z2N8 137 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 OVOL1O14753 267 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 HSD17B6O14756 317 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 SAP30O75446 220 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 CST1P01037 141 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 IL1AP01583 271 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 IGF1P05019 195 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 VDAC1P21796 283 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 PRKACBP22694 351 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 GLP1RP43220 463 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 REG1BP48304 166 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 GNG10P50151 68 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 GNB1P62873 340 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 ZNF816Q0VGE8 651 aaPredicted RBP8.81□□□□□ -1
BRCA1-213ENST00000476777 LCE2CQ5TA81 110 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 FAM53AQ6NSI3 398 aaPredicted RBP8.81□□□□□ -1
BRCA1-213ENST00000476777 HS3ST5Q8IZT8 346 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 FAM71E2Q8N5Q1 922 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 YIPF7Q8N8F6 280 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 ZNF491Q8N8L2 437 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 ZNF565Q8N9K5 539 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 OR51T1Q8NGJ9 327 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 OR10X1Q8NGY0 326 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 OR2T10Q8NGZ9 312 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 PP6455Q8WZ26 134 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 RFT1Q96AA3 541 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 ADAT3Q96EY9 351 aaPredicted RBP8.81□□□□□ -1
BRCA1-213ENST00000476777 UBE2E2Q96LR5 201 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 S1PR3Q99500 378 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 ELAC2Q9BQ52 826 aaKnown RBP8.81□□□□□ -1
BRCA1-213ENST00000476777 KLK15Q9H2R5 256 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 ZNF556Q9HAH1 456 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 CLN6Q9NWW5 311 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 ZNF580Q9UK33 172 aa8.81□□□□□ -1
BRCA1-213ENST00000476777 RYR1P21817 5038 aa8.8□□□□□ -1
BRCA1-213ENST00000476777 LOC107986453A0A1B0GWG9 222 aa8.8□□□□□ -1
BRCA1-213ENST00000476777 A0A1W2PPE3 182 aa8.8□□□□□ -1
BRCA1-213ENST00000476777 DEGS1O15121 323 aa8.8□□□□□ -1
BRCA1-213ENST00000476777 PRKYO43930 277 aa8.8□□□□□ -1
BRCA1-213ENST00000476777 GAPDHP04406 335 aaKnown RBP8.8□□□□□ -1
BRCA1-213ENST00000476777 KRT8P05787 483 aa8.8□□□□□ -1
BRCA1-213ENST00000476777 IGHV4-30-4P0DP06 118 aa8.8□□□□□ -1
BRCA1-213ENST00000476777 RAP2AP10114 183 aa8.8□□□□□ -1
BRCA1-213ENST00000476777 ATF1P18846 271 aa8.8□□□□□ -1
BRCA1-213ENST00000476777 PRKACGP22612 351 aa8.8□□□□□ -1
BRCA1-213ENST00000476777 HTR1FP30939 366 aa8.8□□□□□ -1
BRCA1-213ENST00000476777 MS4A2Q01362 244 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms