RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 TRAV40A0A0B4J280 105 aa24.3■■□□□ 1.48
HOXB3-208ENST00000476342 SMIM30A4D0T7 59 aa24.3■■□□□ 1.48
HOXB3-208ENST00000476342 TFAP2AP05549 437 aa24.3■■□□□ 1.48
HOXB3-208ENST00000476342 MXD1Q05195 221 aa24.3■■□□□ 1.48
HOXB3-208ENST00000476342 NR2C2APQ86WQ0 139 aa24.3■■□□□ 1.48
HOXB3-208ENST00000476342 METTL8Q9H825 291 aaKnown RBP24.3■■□□□ 1.48
HOXB3-208ENST00000476342 RCC2Q9P258 522 aaKnown RBP24.3■■□□□ 1.48
HOXB3-208ENST00000476342 FBLN5Q9UBX5 448 aa24.3■■□□□ 1.48
HOXB3-208ENST00000476342 RBM39Q14498 530 aaKnown RBP24.29■■□□□ 1.48
HOXB3-208ENST00000476342 C2orf76Q3KRA6 126 aa24.29■■□□□ 1.48
HOXB3-208ENST00000476342 GPR157Q5UAW9 335 aa24.29■■□□□ 1.48
HOXB3-208ENST00000476342 TRAPPC6BQ86SZ2 158 aa24.29■■□□□ 1.48
HOXB3-208ENST00000476342 NEK7Q8TDX7 302 aa24.29■■□□□ 1.48
HOXB3-208ENST00000476342 COQ2Q96H96 371 aa24.29■■□□□ 1.48
HOXB3-208ENST00000476342 TM2D1Q9BX74 207 aa24.29■■□□□ 1.48
HOXB3-208ENST00000476342 LIN7BQ9HAP6 207 aa24.29■■□□□ 1.48
HOXB3-208ENST00000476342 ING3Q9NXR8 418 aa24.29■■□□□ 1.48
HOXB3-208ENST00000476342 NUP50Q9UKX7 468 aa24.29■■□□□ 1.48
HOXB3-208ENST00000476342 TRGV10A0A0A0MS01 117 aa24.28■■□□□ 1.48
HOXB3-208ENST00000476342 MCRIP1C9JLW8 97 aa24.28■■□□□ 1.48
HOXB3-208ENST00000476342 GLIPR1P48060 266 aa24.28■■□□□ 1.48
HOXB3-208ENST00000476342 ALDH3B2P48448 385 aa24.28■■□□□ 1.48
HOXB3-208ENST00000476342 LSM3P62310 102 aaKnown RBP24.28■■□□□ 1.48
HOXB3-208ENST00000476342 PAX5Q02548 391 aa24.28■■□□□ 1.48
HOXB3-208ENST00000476342 KLF17Q5JT82 389 aaPredicted RBP24.28■■□□□ 1.48
HOXB3-208ENST00000476342 RAB12Q6IQ22 244 aa24.28■■□□□ 1.48
HOXB3-208ENST00000476342 SFXN4Q6P4A7 337 aa24.28■■□□□ 1.48
HOXB3-208ENST00000476342 GPR141Q7Z602 305 aa24.28■■□□□ 1.48
HOXB3-208ENST00000476342 Q8N7P7 452 aa24.28■■□□□ 1.48
HOXB3-208ENST00000476342 ZNF714Q96N38 554 aa24.28■■□□□ 1.48
HOXB3-208ENST00000476342 SIRT7Q9NRC8 400 aa24.28■■□□□ 1.48
HOXB3-208ENST00000476342 UBE2J1Q9Y385 318 aaPredicted RBP24.28■■□□□ 1.48
HOXB3-208ENST00000476342 NF1P21359 2839 aa24.28■■□□□ 1.48
HOXB3-208ENST00000476342 ODAMA1E959 279 aa24.27■■□□□ 1.48
HOXB3-208ENST00000476342 ZNF728P0DKX0 622 aa24.27■■□□□ 1.48
HOXB3-208ENST00000476342 CCL3L1P16619 93 aa24.27■■□□□ 1.48
HOXB3-208ENST00000476342 FUT3P21217 361 aa24.27■■□□□ 1.48
HOXB3-208ENST00000476342 UNKLQ9H9P5 680 aaKnown RBP24.27■■□□□ 1.48
HOXB3-208ENST00000476342 PEX16Q9Y5Y5 336 aa24.27■■□□□ 1.48
HOXB3-208ENST00000476342 MXRA5Q9NR99 2828 aa24.27■■□□□ 1.48
HOXB3-208ENST00000476342 PDCD6O75340 191 aa24.27■■□□□ 1.48
HOXB3-208ENST00000476342 GLAP06280 429 aa24.27■■□□□ 1.48
HOXB3-208ENST00000476342 IGHV4-38-2P0DP08 117 aa24.27■■□□□ 1.48
HOXB3-208ENST00000476342 EPHA1P21709 976 aa24.27■■□□□ 1.48
HOXB3-208ENST00000476342 METAP1DQ6UB28 335 aaPredicted RBP24.27■■□□□ 1.48
HOXB3-208ENST00000476342 TCF23Q7RTU1 214 aa24.27■■□□□ 1.48
HOXB3-208ENST00000476342 LHX4Q969G2 390 aa24.27■■□□□ 1.48
HOXB3-208ENST00000476342 NEDD4LQ96PU5 975 aa24.27■■□□□ 1.48
HOXB3-208ENST00000476342 NCOR1P1Q9H4R4 102 aa24.27■■□□□ 1.48
HOXB3-208ENST00000476342 OR6C3Q9NZP0 311 aa24.27■■□□□ 1.48
HOXB3-208ENST00000476342 DAPK2Q9UIK4 370 aa24.27■■□□□ 1.48
HOXB3-208ENST00000476342 TMEM272A0A1B0GTI8 110 aa24.26■■□□□ 1.47
HOXB3-208ENST00000476342 MEX3AA1L020 520 aaKnown RBP24.26■■□□□ 1.47
HOXB3-208ENST00000476342 LDLRAD4O15165 306 aa24.26■■□□□ 1.47
HOXB3-208ENST00000476342 RBP4P02753 201 aa24.26■■□□□ 1.47
HOXB3-208ENST00000476342 HOXB4P17483 251 aaPredicted RBP24.26■■□□□ 1.47
HOXB3-208ENST00000476342 PRTN3P24158 256 aa24.26■■□□□ 1.47
HOXB3-208ENST00000476342 RSBN1Q5VWQ0 802 aaPredicted RBP24.26■■□□□ 1.47
HOXB3-208ENST00000476342 PLPPR1Q8TBJ4 325 aa24.26■■□□□ 1.47
HOXB3-208ENST00000476342 LPAR5Q9H1C0 372 aa24.26■■□□□ 1.47
HOXB3-208ENST00000476342 RAB22AQ9UL26 194 aa24.26■■□□□ 1.47
HOXB3-208ENST00000476342 KIAA2026Q5HYC2 2103 aa24.25■■□□□ 1.47
HOXB3-208ENST00000476342 MEIKINA0A087WXM9 373 aa24.25■■□□□ 1.47
HOXB3-208ENST00000476342 C17orf98A8MV24 154 aa24.25■■□□□ 1.47
HOXB3-208ENST00000476342 CLEC2LP0C7M8 214 aa24.25■■□□□ 1.47
HOXB3-208ENST00000476342 SLC2A2P11168 524 aaPredicted RBP24.25■■□□□ 1.47
HOXB3-208ENST00000476342 TGFBR1P36897 503 aa24.25■■□□□ 1.47
HOXB3-208ENST00000476342 BPIFB3P59826 476 aa24.25■■□□□ 1.47
HOXB3-208ENST00000476342 FAM189A2Q15884 450 aa24.25■■□□□ 1.47
HOXB3-208ENST00000476342 NCR3LG1Q68D85 454 aa24.25■■□□□ 1.47
HOXB3-208ENST00000476342 SIGIRRQ6IA17 410 aa24.25■■□□□ 1.47
HOXB3-208ENST00000476342 BRICD5Q6PL45 260 aa24.25■■□□□ 1.47
HOXB3-208ENST00000476342 ANKRD13BQ86YJ7 626 aa24.25■■□□□ 1.47
HOXB3-208ENST00000476342 CORO2AQ92828 525 aa24.25■■□□□ 1.47
HOXB3-208ENST00000476342 NICN1Q9BSH3 213 aa24.25■■□□□ 1.47
HOXB3-208ENST00000476342 GAL3ST2Q9H3Q3 398 aa24.25■■□□□ 1.47
HOXB3-208ENST00000476342 SCOCQ9UIL1 159 aa24.25■■□□□ 1.47
HOXB3-208ENST00000476342 KIF25Q9UIL4 384 aa24.25■■□□□ 1.47
HOXB3-208ENST00000476342 IGHV3OR16-10A0A075B7F0 116 aa24.24■■□□□ 1.47
HOXB3-208ENST00000476342 DLX6P56179 175 aa24.24■■□□□ 1.47
HOXB3-208ENST00000476342 GUCA2AQ02747 115 aa24.24■■□□□ 1.47
HOXB3-208ENST00000476342 NKAPLQ5M9Q1 402 aa24.24■■□□□ 1.47
HOXB3-208ENST00000476342 SLC35E4Q6ICL7 350 aa24.24■■□□□ 1.47
HOXB3-208ENST00000476342 ZNF565Q8N9K5 539 aa24.24■■□□□ 1.47
HOXB3-208ENST00000476342 ETAA1Q9NY74 926 aa24.24■■□□□ 1.47
HOXB3-208ENST00000476342 TAS2R3Q9NYW6 316 aa24.24■■□□□ 1.47
HOXB3-208ENST00000476342 CENPVL3A0A0U1RRI6 287 aa24.23■■□□□ 1.47
HOXB3-208ENST00000476342 TMEM30CPA0ZSE6 113 aa24.23■■□□□ 1.47
HOXB3-208ENST00000476342 FPR2P25090 351 aa24.23■■□□□ 1.47
HOXB3-208ENST00000476342 BLVRBP30043 206 aaPredicted RBP24.23■■□□□ 1.47
HOXB3-208ENST00000476342 RPL5P46777 297 aaKnown RBP24.23■■□□□ 1.47
HOXB3-208ENST00000476342 RIPPLY3P57055 190 aa24.23■■□□□ 1.47
HOXB3-208ENST00000476342 ERVFRD-1P60508 538 aa24.23■■□□□ 1.47
HOXB3-208ENST00000476342 CROCCP3Q8IVE0 287 aa24.23■■□□□ 1.47
HOXB3-208ENST00000476342 C11orf42Q8N5U0 333 aa24.23■■□□□ 1.47
HOXB3-208ENST00000476342 MS4A7Q9GZW8 240 aaPredicted RBP24.23■■□□□ 1.47
HOXB3-208ENST00000476342 C2CD3Q4AC94 2353 aa24.23■■□□□ 1.47
HOXB3-208ENST00000476342 A0A0B4J203 849 aa24.22■■□□□ 1.47
HOXB3-208ENST00000476342 TMEM127O75204 238 aa24.22■■□□□ 1.47
HOXB3-208ENST00000476342 CA11O75493 328 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms