RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 RAB3BP20337 219 aa13.87□□□□□ -0.19
SCAF11-206ENST00000474828 TAF9Q16594 264 aa13.87□□□□□ -0.19
SCAF11-206ENST00000474828 TIMM50Q3ZCQ8 353 aa13.87□□□□□ -0.19
SCAF11-206ENST00000474828 RSBN1Q5VWQ0 802 aaPredicted RBP13.87□□□□□ -0.19
SCAF11-206ENST00000474828 FAM185AQ8N0U4 392 aa13.87□□□□□ -0.19
SCAF11-206ENST00000474828 SUMF2Q8NBJ7 301 aa13.87□□□□□ -0.19
SCAF11-206ENST00000474828 KCTD7Q96MP8 289 aa13.87□□□□□ -0.19
SCAF11-206ENST00000474828 PCGF1Q9BSM1 259 aa13.87□□□□□ -0.19
SCAF11-206ENST00000474828 DPCDQ9BVM2 203 aaPredicted RBP13.87□□□□□ -0.19
SCAF11-206ENST00000474828 PPA2Q9H2U2 334 aa13.87□□□□□ -0.19
SCAF11-206ENST00000474828 TAS2R3Q9NYW6 316 aa13.87□□□□□ -0.19
SCAF11-206ENST00000474828 ONECUT1Q9UBC0 465 aa13.87□□□□□ -0.19
SCAF11-206ENST00000474828 ZNF69Q9UC07 566 aa13.87□□□□□ -0.19
SCAF11-206ENST00000474828 STEAP1Q9UHE8 339 aa13.87□□□□□ -0.19
SCAF11-206ENST00000474828 A0A0A6YYJ9 748 aa13.86□□□□□ -0.19
SCAF11-206ENST00000474828 RNASEK-C17orf49H0YIS7 233 aa13.86□□□□□ -0.19
SCAF11-206ENST00000474828 CRTAPO75718 401 aaPredicted RBP13.86□□□□□ -0.19
SCAF11-206ENST00000474828 OR7C1O76099 320 aaPredicted RBP13.86□□□□□ -0.19
SCAF11-206ENST00000474828 TFAP2AP05549 437 aa13.86□□□□□ -0.19
SCAF11-206ENST00000474828 ARSBP15848 533 aa13.86□□□□□ -0.19
SCAF11-206ENST00000474828 GLIPR1P48060 266 aa13.86□□□□□ -0.19
SCAF11-206ENST00000474828 ALDH3B2P48448 385 aa13.86□□□□□ -0.19
SCAF11-206ENST00000474828 EDDM3BP56851 147 aa13.86□□□□□ -0.19
SCAF11-206ENST00000474828 OR10A3P58181 314 aa13.86□□□□□ -0.19
SCAF11-206ENST00000474828 AESQ08117 197 aa13.86□□□□□ -0.19
SCAF11-206ENST00000474828 BLMHQ13867 455 aa13.86□□□□□ -0.19
SCAF11-206ENST00000474828 RAB11BQ15907 218 aa13.86□□□□□ -0.19
SCAF11-206ENST00000474828 PAN3Q58A45 887 aaKnown RBP13.86□□□□□ -0.19
SCAF11-206ENST00000474828 NCR3LG1Q68D85 454 aa13.86□□□□□ -0.19
SCAF11-206ENST00000474828 SLC35E4Q6ICL7 350 aa13.86□□□□□ -0.19
SCAF11-206ENST00000474828 PTX4Q96A99 478 aa13.86□□□□□ -0.19
SCAF11-206ENST00000474828 FAM3DQ96BQ1 224 aa13.86□□□□□ -0.19
SCAF11-206ENST00000474828 CENPOQ9BU64 300 aa13.86□□□□□ -0.19
SCAF11-206ENST00000474828 SELENOIQ9C0D9 397 aa13.86□□□□□ -0.19
SCAF11-206ENST00000474828 LPAR5Q9H1C0 372 aa13.86□□□□□ -0.19
SCAF11-206ENST00000474828 BANF2Q9H503 90 aa13.86□□□□□ -0.19
SCAF11-206ENST00000474828 TRAV40A0A0B4J280 105 aa13.85□□□□□ -0.19
SCAF11-206ENST00000474828 IGHV1-69DA0A0B4J2H0 117 aa13.85□□□□□ -0.19
SCAF11-206ENST00000474828 NOTOA8MTQ0 251 aa13.85□□□□□ -0.19
SCAF11-206ENST00000474828 TMEM127O75204 238 aa13.85□□□□□ -0.19
SCAF11-206ENST00000474828 CA11O75493 328 aa13.85□□□□□ -0.19
SCAF11-206ENST00000474828 IFNA2P01563 188 aa13.85□□□□□ -0.19
SCAF11-206ENST00000474828 IGHV1-69P01742 117 aa13.85□□□□□ -0.19
SCAF11-206ENST00000474828 CCL3L1P16619 93 aa13.85□□□□□ -0.19
SCAF11-206ENST00000474828 FUT3P21217 361 aa13.85□□□□□ -0.19
SCAF11-206ENST00000474828 UBE2E1P51965 193 aa13.85□□□□□ -0.19
SCAF11-206ENST00000474828 SCN1BQ07699 218 aa13.85□□□□□ -0.19
SCAF11-206ENST00000474828 C2orf76Q3KRA6 126 aa13.85□□□□□ -0.19
SCAF11-206ENST00000474828 KRBOX4Q5JUW0 171 aa13.85□□□□□ -0.19
SCAF11-206ENST00000474828 GPR157Q5UAW9 335 aa13.85□□□□□ -0.19
SCAF11-206ENST00000474828 OR10K2Q6IF99 312 aa13.85□□□□□ -0.19
SCAF11-206ENST00000474828 ZNF497Q6ZNH5 498 aa13.85□□□□□ -0.19
SCAF11-206ENST00000474828 TPRX1Q8N7U7 411 aa13.85□□□□□ -0.19
SCAF11-206ENST00000474828 PLPPR1Q8TBJ4 325 aa13.85□□□□□ -0.19
SCAF11-206ENST00000474828 ZNF714Q96N38 554 aa13.85□□□□□ -0.19
SCAF11-206ENST00000474828 CHCHD6Q9BRQ6 235 aa13.85□□□□□ -0.19
SCAF11-206ENST00000474828 TMEM59Q9BXS4 323 aa13.85□□□□□ -0.19
SCAF11-206ENST00000474828 MRPS26Q9BYN8 205 aaKnown RBP13.85□□□□□ -0.19
SCAF11-206ENST00000474828 BARHL1Q9BZE3 327 aa13.85□□□□□ -0.19
SCAF11-206ENST00000474828 PLGRKTQ9HBL7 147 aa13.85□□□□□ -0.19
SCAF11-206ENST00000474828 OR6C3Q9NZP0 311 aa13.85□□□□□ -0.19
SCAF11-206ENST00000474828 FBN1P35555 2871 aaKnown RBP13.85□□□□□ -0.19
SCAF11-206ENST00000474828 A0A0A6YYD4 124 aa13.84□□□□□ -0.19
SCAF11-206ENST00000474828 hCG_1809904A0A1W2PP81 198 aa13.84□□□□□ -0.19
SCAF11-206ENST00000474828 A0A1W2PPE2 198 aa13.84□□□□□ -0.19
SCAF11-206ENST00000474828 A0A1W2PR64 198 aa13.84□□□□□ -0.19
SCAF11-206ENST00000474828 A0A1W2PRV1 198 aa13.84□□□□□ -0.19
SCAF11-206ENST00000474828 PDCD6O75340 191 aa13.84□□□□□ -0.19
SCAF11-206ENST00000474828 FPR2P25090 351 aa13.84□□□□□ -0.19
SCAF11-206ENST00000474828 CHATP28329 748 aa13.84□□□□□ -0.19
SCAF11-206ENST00000474828 GUCA2AQ02747 115 aa13.84□□□□□ -0.19
SCAF11-206ENST00000474828 EDDM3AQ14507 147 aa13.84□□□□□ -0.19
SCAF11-206ENST00000474828 HEPN1Q6WQI6 88 aa13.84□□□□□ -0.19
SCAF11-206ENST00000474828 OR51D1Q8NGF3 324 aa13.84□□□□□ -0.19
SCAF11-206ENST00000474828 MDFIQ99750 246 aa13.84□□□□□ -0.19
SCAF11-206ENST00000474828 A0A087X0M5 115 aa13.83□□□□□ -0.2
SCAF11-206ENST00000474828 TRGV10A0A0A0MS01 117 aa13.83□□□□□ -0.2
SCAF11-206ENST00000474828 A0A1B0GX30 115 aa13.83□□□□□ -0.2
SCAF11-206ENST00000474828 NPIPB11E5RHQ5 1161 aa13.83□□□□□ -0.2
SCAF11-206ENST00000474828 MPIG6BO95866 241 aa13.83□□□□□ -0.2
SCAF11-206ENST00000474828 IGHV1-8P0DP01 117 aa13.83□□□□□ -0.2
SCAF11-206ENST00000474828 RAB6AP20340 208 aa13.83□□□□□ -0.2
SCAF11-206ENST00000474828 SDC2P34741 201 aa13.83□□□□□ -0.2
SCAF11-206ENST00000474828 SCAND1P57086 179 aa13.83□□□□□ -0.2
SCAF11-206ENST00000474828 ERVFRD-1P60508 538 aa13.83□□□□□ -0.2
SCAF11-206ENST00000474828 RBM39Q14498 530 aaKnown RBP13.83□□□□□ -0.2
SCAF11-206ENST00000474828 ATXN7L3Q14CW9 347 aaPredicted RBP13.83□□□□□ -0.2
SCAF11-206ENST00000474828 P2RY14Q15391 338 aa13.83□□□□□ -0.2
SCAF11-206ENST00000474828 C17orf58Q2M2W7 97 aa13.83□□□□□ -0.2
SCAF11-206ENST00000474828 RAB12Q6IQ22 244 aa13.83□□□□□ -0.2
SCAF11-206ENST00000474828 BPIFB2Q8N4F0 458 aa13.83□□□□□ -0.2
SCAF11-206ENST00000474828 OR11H6Q8NGC7 330 aa13.83□□□□□ -0.2
SCAF11-206ENST00000474828 LHX4Q969G2 390 aa13.83□□□□□ -0.2
SCAF11-206ENST00000474828 FAM46BQ96A09 425 aa13.83□□□□□ -0.2
SCAF11-206ENST00000474828 AJUBAQ96IF1 538 aa13.83□□□□□ -0.2
SCAF11-206ENST00000474828 ZNF48Q96MX3 618 aaPredicted RBP13.83□□□□□ -0.2
SCAF11-206ENST00000474828 FUNDC2Q9BWH2 189 aa13.83□□□□□ -0.2
SCAF11-206ENST00000474828 KCNK15Q9H427 330 aa13.83□□□□□ -0.2
SCAF11-206ENST00000474828 RNF167Q9H6Y7 350 aa13.83□□□□□ -0.2
SCAF11-206ENST00000474828 SIRT7Q9NRC8 400 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms