RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 RORCP51449 518 aa8.53□□□□□ -1.04
CASC3-204ENST00000474190 ERVFRD-1P60508 538 aa8.53□□□□□ -1.04
CASC3-204ENST00000474190 PAX8Q06710 450 aa8.53□□□□□ -1.04
CASC3-204ENST00000474190 SCN1BQ07699 218 aa8.53□□□□□ -1.04
CASC3-204ENST00000474190 AESQ08117 197 aa8.53□□□□□ -1.04
CASC3-204ENST00000474190 CR1LQ2VPA4 569 aa8.53□□□□□ -1.04
CASC3-204ENST00000474190 RAB12Q6IQ22 244 aa8.53□□□□□ -1.04
CASC3-204ENST00000474190 ZNF497Q6ZNH5 498 aa8.53□□□□□ -1.04
CASC3-204ENST00000474190 PIP4P2Q8N4L2 257 aa8.53□□□□□ -1.04
CASC3-204ENST00000474190 LINC01356Q8N9X3 169 aa8.53□□□□□ -1.04
CASC3-204ENST00000474190 TMEM185AQ8NFB2 350 aa8.53□□□□□ -1.04
CASC3-204ENST00000474190 OR4M1Q8NGD0 313 aa8.53□□□□□ -1.04
CASC3-204ENST00000474190 TNFRSF14Q92956 283 aa8.53□□□□□ -1.04
CASC3-204ENST00000474190 RAB39BQ96DA2 213 aa8.53□□□□□ -1.04
CASC3-204ENST00000474190 ARHGAP5-AS1Q96IT6 56 aa8.53□□□□□ -1.04
CASC3-204ENST00000474190 HDHD3Q9BSH5 251 aaPredicted RBP8.53□□□□□ -1.04
CASC3-204ENST00000474190 FAAP24Q9BTP7 215 aa8.53□□□□□ -1.04
CASC3-204ENST00000474190 PECRQ9BY49 303 aa8.53□□□□□ -1.04
CASC3-204ENST00000474190 TMPRSS13Q9BYE2 586 aa8.53□□□□□ -1.04
CASC3-204ENST00000474190 RHBDL2Q9NX52 303 aa8.53□□□□□ -1.04
CASC3-204ENST00000474190 HSF4Q9ULV5 492 aa8.53□□□□□ -1.04
CASC3-204ENST00000474190 INSIG2Q9Y5U4 225 aa8.53□□□□□ -1.04
CASC3-204ENST00000474190 ETV7Q9Y603 341 aa8.53□□□□□ -1.04
CASC3-204ENST00000474190 YLPM1P49750 1951 aaKnown RBP8.52□□□□□ -1.05
CASC3-204ENST00000474190 A0A075B6Q4 140 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 LOC105371242A0A075B767 164 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 TRAV39A0A0B4J263 110 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 NKX6-3A6NJ46 265 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 B4DSR2 109 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 MGST3O14880 152 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 NDUFB3O43676 98 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 CD5LO43866 347 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 MMP23AO75900 390 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 NAPSAO96009 420 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 MT-ND4P03905 459 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 GLAP06280 429 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 FOSL1P15407 271 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 ELK1P19419 428 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 GDNFP39905 211 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 NPY4RP50391 375 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 DLX1P56177 255 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 P2RX3P56373 397 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 GNB2P62879 340 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 ATXN7L3Q14CW9 347 aaPredicted RBP8.52□□□□□ -1.05
CASC3-204ENST00000474190 GRK1Q15835 563 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 C17orf58Q2M2W7 97 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 C11orf91Q3C1V1 193 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 ZNF260Q3ZCT1 412 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 ESCO2Q56NI9 601 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 HCP5Q6MZN7 132 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 ZNF880Q6PDB4 577 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 NLRC3Q7RTR2 1065 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 CROCCP3Q8IVE0 287 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 ASCC1Q8N9N2 400 aaKnown RBP8.52□□□□□ -1.05
CASC3-204ENST00000474190 OR13A1Q8NGR1 328 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 OR10R2Q8NGX6 335 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 MRPL30Q8TCC3 161 aaKnown RBP8.52□□□□□ -1.05
CASC3-204ENST00000474190 RAB40AQ8WXH6 277 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 CORO2AQ92828 525 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 TMEM186Q96B77 213 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 S100A13Q99584 98 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 MDFIQ99750 246 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 SOSTQ9BQB4 213 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 SIRPDQ9H106 197 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 NCOR1P1Q9H4R4 102 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 LINC00574Q9H8X3 128 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.52□□□□□ -1.05
CASC3-204ENST00000474190 PCDHB16Q9NRJ7 776 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 PCDHB10Q9UN67 800 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 PEX16Q9Y5Y5 336 aa8.52□□□□□ -1.05
CASC3-204ENST00000474190 C15orf65H3BRN8 121 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 GPR37O15354 613 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 SSX5O60225 188 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 HPGDSO60760 199 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 FOXH1O75593 365 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 FSHBP01225 129 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 HLA-DQB1P01920 261 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 MELTFP08582 738 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 PTHLHP12272 177 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 HIST1H1DP16402 221 aaKnown RBP8.51□□□□□ -1.05
CASC3-204ENST00000474190 CCL3L1P16619 93 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 NDUFB7P17568 137 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 CDK2P24941 298 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 BLVRBP30043 206 aaPredicted RBP8.51□□□□□ -1.05
CASC3-204ENST00000474190 GZMKP49863 264 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 DVL1P1P54792 670 aaPredicted RBP8.51□□□□□ -1.05
CASC3-204ENST00000474190 TUSC1Q2TAM9 212 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 PAN3Q58A45 887 aaKnown RBP8.51□□□□□ -1.05
CASC3-204ENST00000474190 LRRC10Q5BKY1 277 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 SLC35E4Q6ICL7 350 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 FAM53AQ6NSI3 398 aaPredicted RBP8.51□□□□□ -1.05
CASC3-204ENST00000474190 BAIAP2L2Q6UXY1 529 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 LAX1Q8IWV1 398 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 SAMD12Q8N8I0 201 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 DTX3Q8N9I9 347 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 TBX15Q96SF7 602 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 NUDT16L1Q9BRJ7 211 aaKnown RBP8.51□□□□□ -1.05
CASC3-204ENST00000474190 DCUN1D5Q9BTE7 237 aa8.51□□□□□ -1.05
CASC3-204ENST00000474190 ZMAT3Q9HA38 289 aaKnown RBP8.51□□□□□ -1.05
CASC3-204ENST00000474190 HIF1ANQ9NWT6 349 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms