RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 PDZD9Q8IXQ8 264 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 Q8N7P7 452 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 OR51D1Q8NGF3 324 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 C22orf15Q8WYQ4 148 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 FAM3DQ96BQ1 224 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 YIPF6Q96EC8 236 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 Q96M66 194 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 ZNF714Q96N38 554 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 URM1Q9BTM9 101 aaKnown RBP10.2□□□□□ -0.78
DDX56-209ENST00000473924 CENPOQ9BU64 300 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 KCNK15Q9H427 330 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 RNF167Q9H6Y7 350 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 ZNF581Q9P0T4 197 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 LINC00312Q9Y6C7 94 aa10.2□□□□□ -0.78
DDX56-209ENST00000473924 MEIKINA0A087WXM9 373 aa10.19□□□□□ -0.78
DDX56-209ENST00000473924 CENPVL3A0A0U1RRI6 287 aa10.19□□□□□ -0.78
DDX56-209ENST00000473924 ODAMA1E959 279 aa10.19□□□□□ -0.78
DDX56-209ENST00000473924 IFITM5A6NNB3 132 aa10.19□□□□□ -0.78
DDX56-209ENST00000473924 TMEM14DPA8MWL7 114 aa10.19□□□□□ -0.78
DDX56-209ENST00000473924 ZNF728P0DKX0 622 aa10.19□□□□□ -0.78
DDX56-209ENST00000473924 PRTN3P24158 256 aa10.19□□□□□ -0.78
DDX56-209ENST00000473924 SDC2P34741 201 aa10.19□□□□□ -0.78
DDX56-209ENST00000473924 RPS27AP62979 156 aaKnown RBP10.19□□□□□ -0.78
DDX56-209ENST00000473924 GUCA2AQ02747 115 aa10.19□□□□□ -0.78
DDX56-209ENST00000473924 PRB3Q04118 309 aaPredicted RBP10.19□□□□□ -0.78
DDX56-209ENST00000473924 MXD1Q05195 221 aa10.19□□□□□ -0.78
DDX56-209ENST00000473924 UNC119Q13432 240 aa10.19□□□□□ -0.78
DDX56-209ENST00000473924 RBM39Q14498 530 aaKnown RBP10.19□□□□□ -0.78
DDX56-209ENST00000473924 C2orf76Q3KRA6 126 aa10.19□□□□□ -0.78
DDX56-209ENST00000473924 NCR3LG1Q68D85 454 aa10.19□□□□□ -0.78
DDX56-209ENST00000473924 RAB12Q6IQ22 244 aa10.19□□□□□ -0.78
DDX56-209ENST00000473924 BRICD5Q6PL45 260 aa10.19□□□□□ -0.78
DDX56-209ENST00000473924 BRD3OSQ6XYD6 125 aa10.19□□□□□ -0.78
DDX56-209ENST00000473924 OR2W3Q7Z3T1 314 aa10.19□□□□□ -0.78
DDX56-209ENST00000473924 COQ2Q96H96 371 aa10.19□□□□□ -0.78
DDX56-209ENST00000473924 NEDD4LQ96PU5 975 aa10.19□□□□□ -0.78
DDX56-209ENST00000473924 GAL3ST2Q9H3Q3 398 aa10.19□□□□□ -0.78
DDX56-209ENST00000473924 OR6C3Q9NZP0 311 aa10.19□□□□□ -0.78
DDX56-209ENST00000473924 ZNF69Q9UC07 566 aa10.19□□□□□ -0.78
DDX56-209ENST00000473924 UBE2J1Q9Y385 318 aaPredicted RBP10.19□□□□□ -0.78
DDX56-209ENST00000473924 PEX16Q9Y5Y5 336 aa10.19□□□□□ -0.78
DDX56-209ENST00000473924 NF1P21359 2839 aa10.18□□□□□ -0.78
DDX56-209ENST00000473924 NOTOA8MTQ0 251 aa10.18□□□□□ -0.78
DDX56-209ENST00000473924 AIPO00170 330 aa10.18□□□□□ -0.78
DDX56-209ENST00000473924 FUT3P21217 361 aa10.18□□□□□ -0.78
DDX56-209ENST00000473924 DLX1P56177 255 aa10.18□□□□□ -0.78
DDX56-209ENST00000473924 BPIFB3P59826 476 aa10.18□□□□□ -0.78
DDX56-209ENST00000473924 ERVFRD-1P60508 538 aa10.18□□□□□ -0.78
DDX56-209ENST00000473924 LSM3P62310 102 aaKnown RBP10.18□□□□□ -0.78
DDX56-209ENST00000473924 QRFPP83859 136 aa10.18□□□□□ -0.78
DDX56-209ENST00000473924 NKAPLQ5M9Q1 402 aa10.18□□□□□ -0.78
DDX56-209ENST00000473924 ZNF782Q6ZMW2 699 aaPredicted RBP10.18□□□□□ -0.78
DDX56-209ENST00000473924 ZNF565Q8N9K5 539 aa10.18□□□□□ -0.78
DDX56-209ENST00000473924 OR13F1Q8NGS4 319 aa10.18□□□□□ -0.78
DDX56-209ENST00000473924 PLPPR1Q8TBJ4 325 aa10.18□□□□□ -0.78
DDX56-209ENST00000473924 ZNF418Q8TF45 676 aaPredicted RBP10.18□□□□□ -0.78
DDX56-209ENST00000473924 SLC6A7Q99884 636 aa10.18□□□□□ -0.78
DDX56-209ENST00000473924 FUNDC2Q9BWH2 189 aa10.18□□□□□ -0.78
DDX56-209ENST00000473924 HEXA-AS1Q9H8Q6 139 aa10.18□□□□□ -0.78
DDX56-209ENST00000473924 LIN7BQ9HAP6 207 aa10.18□□□□□ -0.78
DDX56-209ENST00000473924 RCC2Q9P258 522 aaKnown RBP10.18□□□□□ -0.78
DDX56-209ENST00000473924 DAPK2Q9UIK4 370 aa10.18□□□□□ -0.78
DDX56-209ENST00000473924 KIF25Q9UIL4 384 aa10.18□□□□□ -0.78
DDX56-209ENST00000473924 NAV3Q8IVL0 2385 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 SVEP1Q4LDE5 3571 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 IGHV1-69DA0A0B4J2H0 117 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 A0A1W2PRD5 423 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 A0A1W2PRF3 423 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 A0A1W2PRM7 423 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 TMEM30CPA0ZSE6 113 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 UBE2QL1A1L167 161 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 C17orf98A8MV24 154 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 RNASEK-C17orf49H0YIS7 233 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 PDCD6O75340 191 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 IGHV1-69P01742 117 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 RBP4P02753 201 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 SLC2A2P11168 524 aaPredicted RBP10.17□□□□□ -0.78
DDX56-209ENST00000473924 BLVRBP30043 206 aaPredicted RBP10.17□□□□□ -0.78
DDX56-209ENST00000473924 GLP1RP43220 463 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 DLX6P56179 175 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 KLRD1Q13241 179 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 RSBN1Q5VWQ0 802 aaPredicted RBP10.17□□□□□ -0.78
DDX56-209ENST00000473924 RUSC1-AS1Q66K80 236 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 SLC35E4Q6ICL7 350 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 SFXN4Q6P4A7 337 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 RBMS3Q6XE24 437 aaKnown RBP10.17□□□□□ -0.78
DDX56-209ENST00000473924 TCF23Q7RTU1 214 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 NR2C2APQ86WQ0 139 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 BCL6BQ8N143 479 aaPredicted RBP10.17□□□□□ -0.78
DDX56-209ENST00000473924 CORO2AQ92828 525 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 NICN1Q9BSH3 213 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 TM2D1Q9BX74 207 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 SUCNR1Q9BXA5 334 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 LPAR5Q9H1C0 372 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 UNKLQ9H9P5 680 aaKnown RBP10.17□□□□□ -0.78
DDX56-209ENST00000473924 ETAA1Q9NY74 926 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 TAS2R3Q9NYW6 316 aa10.17□□□□□ -0.78
DDX56-209ENST00000473924 TMEM272A0A1B0GTI8 110 aa10.16□□□□□ -0.78
DDX56-209ENST00000473924 ZNF729A6NN14 1252 aaPredicted RBP10.16□□□□□ -0.78
DDX56-209ENST00000473924 TCF21O43680 179 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms