RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 TPBGQ13641 420 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 SMCO1Q147U7 214 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 ZNF124Q15973 351 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 KCNMB1Q16558 191 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 SMN1Q16637 294 aaKnown RBP5.7□□□□□ -1.5
CKS1B-205ENST00000473344 MEP1BQ16820 701 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 LGALSLQ3ZCW2 172 aaPredicted RBP5.7□□□□□ -1.5
CKS1B-205ENST00000473344 IFI44LQ53G44 452 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 SLC25A30Q5SVS4 291 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 COLCA1Q6ZS62 124 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 VTCN1Q7Z7D3 282 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 TMEM179BQ7Z7N9 219 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 TPRA1Q86W33 373 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 HS3ST5Q8IZT8 346 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 LNX2Q8N448 690 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 TOMM5Q8N4H5 51 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 PXT1Q8NFP0 134 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 OR2T35Q8NGX2 323 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 SFT2D1Q8WV19 159 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 SPTSSAQ969W0 71 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 TSSK2Q96PF2 358 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 SIRPDQ9H106 197 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 ABCG5Q9H222 651 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 MIXL1Q9H2W2 232 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 NRIP3Q9NQ35 241 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 ZFP57Q9NU63 452 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 C1orf123Q9NWV4 160 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 DNAJB11Q9UBS4 358 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 RPUSD1Q9UJJ7 312 aaKnown RBP5.7□□□□□ -1.5
CKS1B-205ENST00000473344 IER3IP1Q9Y5U9 82 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 KPTNQ9Y664 436 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 LHFPL6Q9Y693 200 aa5.7□□□□□ -1.5
CKS1B-205ENST00000473344 WNK2Q9Y3S1 2297 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 A0A0D9SG52 128 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 ZAR1LA6NP61 321 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 CD300LBA8K4G0 201 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 C1orf196B1AJZ1 125 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 DISC1C4P0D8 188 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 M0R135 149 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 BHLHE40O14503 412 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 FFAR1O14842 300 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 CTDSPLO15194 276 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 CRTAPO75718 401 aaPredicted RBP5.69□□□□□ -1.5
CKS1B-205ENST00000473344 PPP1R3DO95685 299 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 RENP00797 406 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 OPN1MWP04001 364 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 TCRBP04435 133 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 IL5P05113 134 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 OPN1MW2P0DN77 364 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 OPN1MW3P0DN78 364 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 ZNF823P16415 610 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 GRK5P34947 590 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 FAUP35544 74 aaKnown RBP5.69□□□□□ -1.5
CKS1B-205ENST00000473344 CDKN2AP42771 156 aaKnown RBP5.69□□□□□ -1.5
CKS1B-205ENST00000473344 MTNR1BP49286 362 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 CRISP1P54107 249 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 EIF5AP63241 154 aaKnown RBP5.69□□□□□ -1.5
CKS1B-205ENST00000473344 HIST1H3AP68431 136 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 DEFA5Q01523 94 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 BDH1Q02338 343 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 ACSM1Q08AH1 577 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 RAB40BQ12829 278 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 GPR176Q14439 515 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 HERPUD1Q15011 391 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 HMGN3Q15651 99 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 SSX1Q16384 188 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 BEAN1Q3B7T3 259 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 BCL2L15Q5TBC7 163 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 HIST2H3PS2Q5TEC6 136 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 SLC35E4Q6ICL7 350 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 SLC18B1Q6NT16 456 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 RPL13AP3Q6NVV1 102 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 C11orf88Q6PI97 169 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 SMARCD3Q6STE5 483 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 DPY19L2P2Q6ZN68 376 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 HIST2H3AQ71DI3 136 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 SLC36A1Q7Z2H8 476 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 TSEN54Q7Z6J9 526 aaKnown RBP5.69□□□□□ -1.5
CKS1B-205ENST00000473344 NAA40Q86UY6 237 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 LINC00346Q8IVM7 164 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 OR8S1Q8NH09 359 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 OR5R1Q8NH85 324 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 SLC7A13Q8TCU3 470 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 MRAPQ8TCY5 172 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 RFKQ969G6 155 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 ZNF799Q96GE5 643 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 GPX7Q96SL4 187 aaPredicted RBP5.69□□□□□ -1.5
CKS1B-205ENST00000473344 TSNAXQ99598 290 aaKnown RBP5.69□□□□□ -1.5
CKS1B-205ENST00000473344 THAP7Q9BT49 309 aaPredicted RBP5.69□□□□□ -1.5
CKS1B-205ENST00000473344 BARHL1Q9BZE3 327 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 ANKRD19PQ9H560 264 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 SLC25A19Q9HC21 320 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 SIRT7Q9NRC8 400 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 MRPL15Q9P015 296 aaKnown RBP5.69□□□□□ -1.5
CKS1B-205ENST00000473344 ZNRD1Q9P1U0 126 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 COMMD3Q9UBI1 195 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 SIGLEC7Q9Y286 467 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 LSM2Q9Y333 95 aaKnown RBP5.69□□□□□ -1.5
CKS1B-205ENST00000473344 DMRT1Q9Y5R6 373 aa5.69□□□□□ -1.5
CKS1B-205ENST00000473344 IGHV3OR15-7A0A075B7D8 119 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms