RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 PRSS22Q9GZN4 317 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 FAM192AQ9GZU8 254 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 BABAM2Q9NXR7 383 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 OR6C3Q9NZP0 311 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 ZNF581Q9P0T4 197 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 CLEC2DQ9UHP7 191 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 EXOSC1Q9Y3B2 195 aaKnown RBP7.24□□□□□ -1.25
USF1-204ENST00000472217 VWFP04275 2813 aa7.24□□□□□ -1.25
USF1-204ENST00000472217 MEIKINA0A087WXM9 373 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 A0A087X0M5 115 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 KBTBD11-OT1A0A1B0GTJ5 212 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 A0A1B0GX30 115 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 IRGMA1A4Y4 181 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 LEUTXA8MZ59 168 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 OGG1O15527 345 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 FBXO24O75426 580 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 CDRT1O95170 752 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 HTR3BO95264 441 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 CGB3P0DN86 165 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 CGB7P0DN87 165 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 CD28P10747 220 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 MYL12AP19105 171 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 BLCAPP62952 87 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 PPP3R1P63098 170 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 ADARB1P78563 741 aaKnown RBP7.23□□□□□ -1.25
USF1-204ENST00000472217 IL13RA2Q14627 380 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 RCN1Q15293 331 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 HLA-DRB5Q30154 266 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 TMEM95Q3KNT9 176 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 TPTE2P1Q5T6R2 138 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 DDI2Q5TDH0 399 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 TTC23Q5W5X9 447 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 DHRSXQ8N5I4 330 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 PACRGLQ8N7B6 248 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 ZNF485Q8NCK3 441 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 SETD9Q8NE22 299 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 OR52N1Q8NH53 320 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 PLPPR1Q8TBJ4 325 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 WIPF2Q8TF74 440 aaPredicted RBP7.23□□□□□ -1.25
USF1-204ENST00000472217 TMEM80Q96HE8 168 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 KIRREL1Q96J84 757 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 OR5M11Q96RB7 305 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 WNT10AQ9GZT5 417 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 TMEM138Q9NPI0 162 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 CALYQ9NYX4 217 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 IL36GQ9NZH8 169 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 ZNF281Q9Y2X9 895 aa7.23□□□□□ -1.25
USF1-204ENST00000472217 TRBV5-5A0A0J9YX44 114 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 MAGEA13PA6NCF6 341 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 LY6LH3BQJ8 138 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 BUB1B-PAK6H3BSN5 160 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 TOR1AO14656 332 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 IL1AP01583 271 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 OPN1MWP04001 364 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 ALDOBP05062 364 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 OPN1MW2P0DN77 364 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 OPN1MW3P0DN78 364 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 IGFBP3P17936 291 aaPredicted RBP7.22□□□□□ -1.25
USF1-204ENST00000472217 NFYBP25208 207 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 BDKRB2P30411 391 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 BRS3P32247 399 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 ZNF93P35789 620 aaPredicted RBP7.22□□□□□ -1.25
USF1-204ENST00000472217 CEACAM3P40198 252 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 VDAC2P45880 294 aaPredicted RBP7.22□□□□□ -1.25
USF1-204ENST00000472217 ARHGDIBP52566 201 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 PRRX1P54821 245 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 RBM11P57052 281 aaKnown RBP7.22□□□□□ -1.25
USF1-204ENST00000472217 RPS11P62280 158 aaKnown RBP eCLIP7.22□□□□□ -1.25
USF1-204ENST00000472217 PAX5Q02548 391 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 ST3GAL4Q11206 333 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 RBM39Q14498 530 aaKnown RBP7.22□□□□□ -1.25
USF1-204ENST00000472217 NSUN5P1Q3KNT7 163 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 ARSJQ5FYB0 599 aaPredicted RBP7.22□□□□□ -1.25
USF1-204ENST00000472217 NHLRC3Q5JS37 347 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 RSBN1Q5VWQ0 802 aaPredicted RBP7.22□□□□□ -1.25
USF1-204ENST00000472217 DMKNQ6E0U4 476 aaPredicted RBP7.22□□□□□ -1.25
USF1-204ENST00000472217 C16orf82Q7Z2V1 217 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 OSR2Q8N2R0 312 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 ZFP41Q8N8Y5 198 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 ZNF565Q8N9K5 539 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 SUMF2Q8NBJ7 301 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 OR9G1Q8NH87 305 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 MRGPRDQ8TDS7 321 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 GGHQ92820 318 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 GHSRQ92847 366 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 LEAP2Q969E1 77 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 PGLYRP3Q96LB9 341 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 OCSTAMPQ9BR26 566 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 BARHL1Q9BZE3 327 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 NCOR1P1Q9H4R4 102 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 LIN7BQ9HAP6 207 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 C8orf4Q9NR00 106 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 CHCHD3Q9NX63 227 aaKnown RBP7.22□□□□□ -1.25
USF1-204ENST00000472217 ING4Q9UNL4 249 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 ST3GAL6Q9Y274 331 aa7.22□□□□□ -1.25
USF1-204ENST00000472217 TRAV8-7A0A075B6U6 113 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 TRAV39A0A0B4J263 110 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 ADARB2-AS1A8MUL3 147 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 OOSP1A8MZH6 123 aa7.21□□□□□ -1.26
USF1-204ENST00000472217 NPIPB11E5RHQ5 1161 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms