RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 PLSCR3Q9NRY6 295 aa14.73□□□□□ -0.05
SORT1-203ENST00000471996 C19orf73Q9NVV2 129 aa14.73□□□□□ -0.05
SORT1-203ENST00000471996 ZNF580Q9UK33 172 aa14.73□□□□□ -0.05
SORT1-203ENST00000471996 IGHV3-72A0A0B4J1Y9 119 aa14.72□□□□□ -0.05
SORT1-203ENST00000471996 A8MZ25 164 aa14.72□□□□□ -0.05
SORT1-203ENST00000471996 SYT7O43581 403 aa14.72□□□□□ -0.05
SORT1-203ENST00000471996 IGF1P05019 195 aa14.72□□□□□ -0.05
SORT1-203ENST00000471996 ZNF44P15621 663 aa14.72□□□□□ -0.05
SORT1-203ENST00000471996 CXCR4P61073 352 aa14.72□□□□□ -0.05
SORT1-203ENST00000471996 GNB1P62873 340 aa14.72□□□□□ -0.05
SORT1-203ENST00000471996 GABPB1Q06547 395 aaPredicted RBP14.72□□□□□ -0.05
SORT1-203ENST00000471996 SCN1BQ07699 218 aa14.72□□□□□ -0.05
SORT1-203ENST00000471996 ZNF816Q0VGE8 651 aaPredicted RBP14.72□□□□□ -0.05
SORT1-203ENST00000471996 ODF4Q2M2E3 257 aa14.72□□□□□ -0.05
SORT1-203ENST00000471996 MOB3BQ86TA1 216 aa14.72□□□□□ -0.05
SORT1-203ENST00000471996 OR2T10Q8NGZ9 312 aa14.72□□□□□ -0.05
SORT1-203ENST00000471996 GIPC3Q8TF64 312 aa14.72□□□□□ -0.05
SORT1-203ENST00000471996 S1PR3Q99500 378 aa14.72□□□□□ -0.05
SORT1-203ENST00000471996 RASL11BQ9BPW5 248 aa14.72□□□□□ -0.05
SORT1-203ENST00000471996 HSPB9Q9BQS6 159 aa14.72□□□□□ -0.05
SORT1-203ENST00000471996 KLK15Q9H2R5 256 aa14.72□□□□□ -0.05
SORT1-203ENST00000471996 MAGIXQ9H6Y5 334 aa14.72□□□□□ -0.05
SORT1-203ENST00000471996 KRT84Q9NSB2 600 aa14.72□□□□□ -0.05
SORT1-203ENST00000471996 IDI2-AS1Q9NZ38 188 aa14.72□□□□□ -0.05
SORT1-203ENST00000471996 VSIG4Q9Y279 399 aa14.72□□□□□ -0.05
SORT1-203ENST00000471996 IGHV1-3A0A0C4DH29 117 aa14.71□□□□□ -0.05
SORT1-203ENST00000471996 HSD17B6O14756 317 aa14.71□□□□□ -0.05
SORT1-203ENST00000471996 GNG10P50151 68 aa14.71□□□□□ -0.05
SORT1-203ENST00000471996 MTCP1P56278 107 aa14.71□□□□□ -0.05
SORT1-203ENST00000471996 ATXN7L3Q14CW9 347 aaPredicted RBP14.71□□□□□ -0.05
SORT1-203ENST00000471996 FAM53AQ6NSI3 398 aaPredicted RBP14.71□□□□□ -0.05
SORT1-203ENST00000471996 Q6P435 159 aa14.71□□□□□ -0.05
SORT1-203ENST00000471996 PGAM4Q8N0Y7 254 aa14.71□□□□□ -0.05
SORT1-203ENST00000471996 Q8N1Y9 231 aa14.71□□□□□ -0.05
SORT1-203ENST00000471996 ZNF565Q8N9K5 539 aa14.71□□□□□ -0.05
SORT1-203ENST00000471996 OR10X1Q8NGY0 326 aa14.71□□□□□ -0.05
SORT1-203ENST00000471996 ST6GALNAC6Q969X2 333 aa14.71□□□□□ -0.05
SORT1-203ENST00000471996 OR5B12Q96R08 314 aa14.71□□□□□ -0.05
SORT1-203ENST00000471996 CNN2Q99439 309 aaKnown RBP14.71□□□□□ -0.05
SORT1-203ENST00000471996 OSBPL10Q9BXB5 764 aa14.71□□□□□ -0.05
SORT1-203ENST00000471996 LINC00574Q9H8X3 128 aa14.71□□□□□ -0.05
SORT1-203ENST00000471996 CHCHD3Q9NX63 227 aaKnown RBP14.71□□□□□ -0.05
SORT1-203ENST00000471996 CALYQ9NYX4 217 aa14.71□□□□□ -0.05
SORT1-203ENST00000471996 MRM2Q9UI43 246 aaKnown RBP14.71□□□□□ -0.05
SORT1-203ENST00000471996 RBMY1BA6NDE4 496 aaKnown RBP14.7□□□□□ -0.06
SORT1-203ENST00000471996 RBMY1EA6NEQ0 496 aaKnown RBP14.7□□□□□ -0.06
SORT1-203ENST00000471996 SLC33A1O00400 549 aaPredicted RBP14.7□□□□□ -0.06
SORT1-203ENST00000471996 IL1AP01583 271 aa14.7□□□□□ -0.06
SORT1-203ENST00000471996 GAPDHP04406 335 aaKnown RBP14.7□□□□□ -0.06
SORT1-203ENST00000471996 RBMY1DP0C7P1 496 aaKnown RBP14.7□□□□□ -0.06
SORT1-203ENST00000471996 OR5H8P0DN80 308 aa14.7□□□□□ -0.06
SORT1-203ENST00000471996 ATP6V1B2P21281 511 aa14.7□□□□□ -0.06
SORT1-203ENST00000471996 GLP1RP43220 463 aa14.7□□□□□ -0.06
SORT1-203ENST00000471996 ISL1P61371 349 aa14.7□□□□□ -0.06
SORT1-203ENST00000471996 PDZK1IP1Q13113 114 aa14.7□□□□□ -0.06
SORT1-203ENST00000471996 GK3PQ14409 553 aa14.7□□□□□ -0.06
SORT1-203ENST00000471996 TMEM65Q6PI78 240 aa14.7□□□□□ -0.06
SORT1-203ENST00000471996 LYPD6Q86Y78 171 aa14.7□□□□□ -0.06
SORT1-203ENST00000471996 CHST4Q8NCG5 386 aa14.7□□□□□ -0.06
SORT1-203ENST00000471996 CCDC54Q8NEL0 328 aa14.7□□□□□ -0.06
SORT1-203ENST00000471996 DLX4Q92988 240 aaPredicted RBP14.7□□□□□ -0.06
SORT1-203ENST00000471996 C10orf35Q96D05 121 aa14.7□□□□□ -0.06
SORT1-203ENST00000471996 GHITMQ9H3K2 345 aa14.7□□□□□ -0.06
SORT1-203ENST00000471996 IGKV1-9A0A0C4DH69 117 aa14.69□□□□□ -0.06
SORT1-203ENST00000471996 IGKV1-12A0A0C4DH73 117 aa14.69□□□□□ -0.06
SORT1-203ENST00000471996 TCRBV5S2A0A599 114 aa14.69□□□□□ -0.06
SORT1-203ENST00000471996 MAGEA13PA6NCF6 341 aa14.69□□□□□ -0.06
SORT1-203ENST00000471996 NPIPB11E5RHQ5 1161 aa14.69□□□□□ -0.06
SORT1-203ENST00000471996 IGKV1D-12P01611 117 aa14.69□□□□□ -0.06
SORT1-203ENST00000471996 IFNA6P05013 189 aa14.69□□□□□ -0.06
SORT1-203ENST00000471996 OSMP13725 252 aa14.69□□□□□ -0.06
SORT1-203ENST00000471996 SOX6P35712 828 aa14.69□□□□□ -0.06
SORT1-203ENST00000471996 REG1BP48304 166 aa14.69□□□□□ -0.06
SORT1-203ENST00000471996 ZP1P60852 638 aa14.69□□□□□ -0.06
SORT1-203ENST00000471996 ACSM6Q6P461 480 aa14.69□□□□□ -0.06
SORT1-203ENST00000471996 SLC16A12Q6ZSM3 486 aa14.69□□□□□ -0.06
SORT1-203ENST00000471996 CATSPERDQ86XM0 798 aa14.69□□□□□ -0.06
SORT1-203ENST00000471996 OR13A1Q8NGR1 328 aa14.69□□□□□ -0.06
SORT1-203ENST00000471996 IL17DQ8TAD2 202 aa14.69□□□□□ -0.06
SORT1-203ENST00000471996 MNTQ99583 582 aa14.69□□□□□ -0.06
SORT1-203ENST00000471996 ELAC2Q9BQ52 826 aaKnown RBP14.69□□□□□ -0.06
SORT1-203ENST00000471996 CHCHD6Q9BRQ6 235 aa14.69□□□□□ -0.06
SORT1-203ENST00000471996 ACTR3BQ9P1U1 418 aa14.69□□□□□ -0.06
SORT1-203ENST00000471996 KDM4BO94953 1096 aa14.68□□□□□ -0.06
SORT1-203ENST00000471996 RPP14O95059 124 aaKnown RBP14.68□□□□□ -0.06
SORT1-203ENST00000471996 C21orf33P30042 268 aaPredicted RBP14.68□□□□□ -0.06
SORT1-203ENST00000471996 PPIFP30405 207 aaKnown RBP14.68□□□□□ -0.06
SORT1-203ENST00000471996 LTC4SQ16873 150 aa14.68□□□□□ -0.06
SORT1-203ENST00000471996 SPATS1Q496A3 300 aa14.68□□□□□ -0.06
SORT1-203ENST00000471996 TMEM236Q5W0B7 351 aa14.68□□□□□ -0.06
SORT1-203ENST00000471996 SLC35F2Q8IXU6 374 aa14.68□□□□□ -0.06
SORT1-203ENST00000471996 OR8H1Q8NGG4 311 aa14.68□□□□□ -0.06
SORT1-203ENST00000471996 OR51T1Q8NGJ9 327 aa14.68□□□□□ -0.06
SORT1-203ENST00000471996 PP6455Q8WZ26 134 aa14.68□□□□□ -0.06
SORT1-203ENST00000471996 ADI1Q9BV57 179 aa14.68□□□□□ -0.06
SORT1-203ENST00000471996 TEX12Q9BXU0 123 aa14.68□□□□□ -0.06
SORT1-203ENST00000471996 OR51J1Q9H342 316 aa14.68□□□□□ -0.06
SORT1-203ENST00000471996 NCOR1P1Q9H4R4 102 aa14.68□□□□□ -0.06
SORT1-203ENST00000471996 PCLOQ9Y6V0 5065 aa14.68□□□□□ -0.06
SORT1-203ENST00000471996 MEIKINA0A087WXM9 373 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms