RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 SATL1Q86VE3 508 aa18.02■□□□□ 0.48
C9orf3-213ENST00000471978 PXT1Q8NFP0 134 aa18.02■□□□□ 0.48
C9orf3-213ENST00000471978 OR51T1Q8NGJ9 327 aa18.02■□□□□ 0.48
C9orf3-213ENST00000471978 HAVCR2Q8TDQ0 301 aa18.02■□□□□ 0.48
C9orf3-213ENST00000471978 APH1BQ8WW43 257 aa18.02■□□□□ 0.48
C9orf3-213ENST00000471978 GPER1Q99527 375 aa18.02■□□□□ 0.48
C9orf3-213ENST00000471978 S100A14Q9HCY8 104 aa18.02■□□□□ 0.48
C9orf3-213ENST00000471978 OR3A4PP47883 348 aa18.01■□□□□ 0.47
C9orf3-213ENST00000471978 SOX2P48431 317 aa18.01■□□□□ 0.47
C9orf3-213ENST00000471978 GTF2A1P52655 376 aaPredicted RBP18.01■□□□□ 0.47
C9orf3-213ENST00000471978 ABCA11PQ4W5N1 156 aa18.01■□□□□ 0.47
C9orf3-213ENST00000471978 FBLN7Q53RD9 439 aa18.01■□□□□ 0.47
C9orf3-213ENST00000471978 UTF1Q5T230 341 aa18.01■□□□□ 0.47
C9orf3-213ENST00000471978 ZNF529Q6P280 563 aa18.01■□□□□ 0.47
C9orf3-213ENST00000471978 CENPVQ7Z7K6 275 aaPredicted RBP18.01■□□□□ 0.47
C9orf3-213ENST00000471978 ZNF565Q8N9K5 539 aa18.01■□□□□ 0.47
C9orf3-213ENST00000471978 CNIH3Q8TBE1 160 aa18.01■□□□□ 0.47
C9orf3-213ENST00000471978 TNFAIP8L1Q8WVP5 186 aa18.01■□□□□ 0.47
C9orf3-213ENST00000471978 RBM14Q96PK6 669 aaKnown RBP18.01■□□□□ 0.47
C9orf3-213ENST00000471978 MEIKINA0A087WXM9 373 aa18■□□□□ 0.47
C9orf3-213ENST00000471978 TRAV24A0A0B4J272 114 aa18■□□□□ 0.47
C9orf3-213ENST00000471978 A0A1W2PRX2 142 aa18■□□□□ 0.47
C9orf3-213ENST00000471978 LY6LH3BQJ8 138 aa18■□□□□ 0.47
C9orf3-213ENST00000471978 GABRPO00591 440 aa18■□□□□ 0.47
C9orf3-213ENST00000471978 OR2F2O95006 317 aa18■□□□□ 0.47
C9orf3-213ENST00000471978 LIMS3P0CW19 117 aa18■□□□□ 0.47
C9orf3-213ENST00000471978 LIMS4P0CW20 117 aa18■□□□□ 0.47
C9orf3-213ENST00000471978 GLP1RP43220 463 aa18■□□□□ 0.47
C9orf3-213ENST00000471978 CD83Q01151 205 aa18■□□□□ 0.47
C9orf3-213ENST00000471978 CCDC144NLQ6NUI1 221 aa18■□□□□ 0.47
C9orf3-213ENST00000471978 PQLC1Q8N2U9 271 aa18■□□□□ 0.47
C9orf3-213ENST00000471978 OR51A2Q8NGJ7 313 aa18■□□□□ 0.47
C9orf3-213ENST00000471978 RGP1Q92546 391 aaPredicted RBP18■□□□□ 0.47
C9orf3-213ENST00000471978 KIRREL1Q96J84 757 aa18■□□□□ 0.47
C9orf3-213ENST00000471978 JAM3Q9BX67 310 aa18■□□□□ 0.47
C9orf3-213ENST00000471978 BARHL1Q9BZE3 327 aa18■□□□□ 0.47
C9orf3-213ENST00000471978 FAM192AQ9GZU8 254 aa18■□□□□ 0.47
C9orf3-213ENST00000471978 TAS2R4Q9NYW5 299 aa18■□□□□ 0.47
C9orf3-213ENST00000471978 ZKSCAN7Q9P0L1 754 aaPredicted RBP18■□□□□ 0.47
C9orf3-213ENST00000471978 KIF25Q9UIL4 384 aa18■□□□□ 0.47
C9orf3-213ENST00000471978 OOSP1A8MZH6 123 aa17.99■□□□□ 0.47
C9orf3-213ENST00000471978 LPLP06858 475 aa17.99■□□□□ 0.47
C9orf3-213ENST00000471978 CGB3P0DN86 165 aa17.99■□□□□ 0.47
C9orf3-213ENST00000471978 CGB7P0DN87 165 aa17.99■□□□□ 0.47
C9orf3-213ENST00000471978 MNDAP41218 407 aa17.99■□□□□ 0.47
C9orf3-213ENST00000471978 IL13RA2Q14627 380 aa17.99■□□□□ 0.47
C9orf3-213ENST00000471978 RSU1Q15404 277 aa17.99■□□□□ 0.47
C9orf3-213ENST00000471978 REC114Q7Z4M0 266 aa17.99■□□□□ 0.47
C9orf3-213ENST00000471978 OR13A1Q8NGR1 328 aa17.99■□□□□ 0.47
C9orf3-213ENST00000471978 OR10K1Q8NGX5 313 aa17.99■□□□□ 0.47
C9orf3-213ENST00000471978 OR9G1Q8NH87 305 aa17.99■□□□□ 0.47
C9orf3-213ENST00000471978 GPR148Q8TDV2 347 aa17.99■□□□□ 0.47
C9orf3-213ENST00000471978 NCOR1P1Q9H4R4 102 aa17.99■□□□□ 0.47
C9orf3-213ENST00000471978 FGF20Q9NP95 211 aaPredicted RBP17.99■□□□□ 0.47
C9orf3-213ENST00000471978 CALYQ9NYX4 217 aa17.99■□□□□ 0.47
C9orf3-213ENST00000471978 CD2P06729 351 aa17.98■□□□□ 0.47
C9orf3-213ENST00000471978 C21orf33P30042 268 aaPredicted RBP17.98■□□□□ 0.47
C9orf3-213ENST00000471978 SMN1Q16637 294 aaKnown RBP17.98■□□□□ 0.47
C9orf3-213ENST00000471978 PIGYQ3MUY2 71 aa17.98■□□□□ 0.47
C9orf3-213ENST00000471978 RPL22L1Q6P5R6 122 aaKnown RBP17.98■□□□□ 0.47
C9orf3-213ENST00000471978 DNAH3Q8TD57 4116 aa17.98■□□□□ 0.47
C9orf3-213ENST00000471978 SH2D7A6NKC9 451 aaPredicted RBP17.97■□□□□ 0.47
C9orf3-213ENST00000471978 WBP4O75554 376 aaKnown RBP17.97■□□□□ 0.47
C9orf3-213ENST00000471978 HTR3BO95264 441 aa17.97■□□□□ 0.47
C9orf3-213ENST00000471978 AMY1AP04745 511 aa17.97■□□□□ 0.47
C9orf3-213ENST00000471978 AMY2AP04746 511 aa17.97■□□□□ 0.47
C9orf3-213ENST00000471978 ETV1P50549 477 aa17.97■□□□□ 0.47
C9orf3-213ENST00000471978 CCDC58Q4VC31 144 aa17.97■□□□□ 0.47
C9orf3-213ENST00000471978 XAF1Q6GPH4 301 aa17.97■□□□□ 0.47
C9orf3-213ENST00000471978 ZNF555Q8NEP9 628 aa17.97■□□□□ 0.47
C9orf3-213ENST00000471978 Q8NFD4 153 aa17.97■□□□□ 0.47
C9orf3-213ENST00000471978 SGCDQ92629 289 aa17.97■□□□□ 0.47
C9orf3-213ENST00000471978 LEAP2Q969E1 77 aa17.97■□□□□ 0.47
C9orf3-213ENST00000471978 RPEQ96AT9 228 aa17.97■□□□□ 0.47
C9orf3-213ENST00000471978 IDI2-AS1Q9NZ38 188 aa17.97■□□□□ 0.47
C9orf3-213ENST00000471978 AMMECR1Q9Y4X0 333 aaPredicted RBP17.97■□□□□ 0.47
C9orf3-213ENST00000471978 TCRBV4S1A1TA0A5B7 111 aa17.96■□□□□ 0.47
C9orf3-213ENST00000471978 J3QR06 171 aa17.96■□□□□ 0.47
C9orf3-213ENST00000471978 IL1AP01583 271 aa17.96■□□□□ 0.47
C9orf3-213ENST00000471978 IGHV3-7P01780 117 aa17.96■□□□□ 0.47
C9orf3-213ENST00000471978 FAM106CPP0CH98 169 aa17.96■□□□□ 0.47
C9orf3-213ENST00000471978 TCTEX1D4Q5JR98 221 aa17.96■□□□□ 0.47
C9orf3-213ENST00000471978 C9orf152Q5JTZ5 239 aa17.96■□□□□ 0.47
C9orf3-213ENST00000471978 RSBN1Q5VWQ0 802 aaPredicted RBP17.96■□□□□ 0.47
C9orf3-213ENST00000471978 ASCL4Q6XD76 172 aa17.96■□□□□ 0.47
C9orf3-213ENST00000471978 Q6ZPA2 131 aa17.96■□□□□ 0.47
C9orf3-213ENST00000471978 PLPPR1Q8TBJ4 325 aa17.96■□□□□ 0.47
C9orf3-213ENST00000471978 MRGPRDQ8TDS7 321 aa17.96■□□□□ 0.47
C9orf3-213ENST00000471978 TOMM40LQ969M1 308 aa17.96■□□□□ 0.47
C9orf3-213ENST00000471978 TMEM106AQ96A25 262 aa17.96■□□□□ 0.47
C9orf3-213ENST00000471978 LINC00574Q9H8X3 128 aa17.96■□□□□ 0.47
C9orf3-213ENST00000471978 PCDHB16Q9NRJ7 776 aa17.96■□□□□ 0.47
C9orf3-213ENST00000471978 M0QZK8 103 aa17.95■□□□□ 0.46
C9orf3-213ENST00000471978 CDRT1O95170 752 aa17.95■□□□□ 0.46
C9orf3-213ENST00000471978 BAG2O95816 211 aa17.95■□□□□ 0.46
C9orf3-213ENST00000471978 PF4V1P10720 104 aa17.95■□□□□ 0.46
C9orf3-213ENST00000471978 CD33P20138 364 aa17.95■□□□□ 0.46
C9orf3-213ENST00000471978 DCKP27707 260 aa17.95■□□□□ 0.46
C9orf3-213ENST00000471978 KCNJ3P48549 501 aa17.95■□□□□ 0.46
C9orf3-213ENST00000471978 PAX5Q02548 391 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms