RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 FAM90A16PA6NEW6 464 aa11.79□□□□□ -0.52
SDCCAG3-209ENST00000468963 FAM90A20PA6NIJ5 464 aa11.79□□□□□ -0.52
SDCCAG3-209ENST00000468963 FAM90A9PA6NNJ1 464 aa11.79□□□□□ -0.52
SDCCAG3-209ENST00000468963 FAM90A12PA8MX19 464 aa11.79□□□□□ -0.52
SDCCAG3-209ENST00000468963 FAM90A5PA8MXJ8 464 aa11.79□□□□□ -0.52
SDCCAG3-209ENST00000468963 OOSP1A8MZH6 123 aa11.79□□□□□ -0.52
SDCCAG3-209ENST00000468963 TOR1AO14656 332 aa11.79□□□□□ -0.52
SDCCAG3-209ENST00000468963 FAM90A15PP0C7V4 464 aa11.79□□□□□ -0.52
SDCCAG3-209ENST00000468963 FAM90A13PP0C7W8 464 aa11.79□□□□□ -0.52
SDCCAG3-209ENST00000468963 FAM90A14PP0C7W9 464 aa11.79□□□□□ -0.52
SDCCAG3-209ENST00000468963 FAM90A24PP0C7X0 464 aa11.79□□□□□ -0.52
SDCCAG3-209ENST00000468963 CEACAM3P40198 252 aa11.79□□□□□ -0.52
SDCCAG3-209ENST00000468963 GBX2P52951 348 aaPredicted RBP11.79□□□□□ -0.52
SDCCAG3-209ENST00000468963 ATXN7L3Q14CW9 347 aaPredicted RBP11.79□□□□□ -0.52
SDCCAG3-209ENST00000468963 ABCA11PQ4W5N1 156 aa11.79□□□□□ -0.52
SDCCAG3-209ENST00000468963 ZNF565Q8N9K5 539 aa11.79□□□□□ -0.52
SDCCAG3-209ENST00000468963 CNIH3Q8TBE1 160 aa11.79□□□□□ -0.52
SDCCAG3-209ENST00000468963 KIRREL1Q96J84 757 aa11.79□□□□□ -0.52
SDCCAG3-209ENST00000468963 C9orf16Q9BUW7 83 aa11.79□□□□□ -0.52
SDCCAG3-209ENST00000468963 NECAP2Q9NVZ3 263 aa11.79□□□□□ -0.52
SDCCAG3-209ENST00000468963 DHDHQ9UQ10 334 aa11.79□□□□□ -0.52
SDCCAG3-209ENST00000468963 NPIPB11E5RHQ5 1161 aa11.78□□□□□ -0.52
SDCCAG3-209ENST00000468963 H0YJX3 145 aa11.78□□□□□ -0.52
SDCCAG3-209ENST00000468963 LPLP06858 475 aa11.78□□□□□ -0.52
SDCCAG3-209ENST00000468963 CCDC159P0C7I6 412 aa11.78□□□□□ -0.52
SDCCAG3-209ENST00000468963 LIMS3P0CW19 117 aa11.78□□□□□ -0.52
SDCCAG3-209ENST00000468963 LIMS4P0CW20 117 aa11.78□□□□□ -0.52
SDCCAG3-209ENST00000468963 GTF2A1P52655 376 aaPredicted RBP11.78□□□□□ -0.52
SDCCAG3-209ENST00000468963 THNSL2Q86YJ6 484 aa11.78□□□□□ -0.52
SDCCAG3-209ENST00000468963 OR51A2Q8NGJ7 313 aa11.78□□□□□ -0.52
SDCCAG3-209ENST00000468963 OR13A1Q8NGR1 328 aa11.78□□□□□ -0.52
SDCCAG3-209ENST00000468963 OR9G1Q8NH87 305 aa11.78□□□□□ -0.52
SDCCAG3-209ENST00000468963 APH1BQ8WW43 257 aa11.78□□□□□ -0.52
SDCCAG3-209ENST00000468963 RGP1Q92546 391 aaPredicted RBP11.78□□□□□ -0.52
SDCCAG3-209ENST00000468963 PHF21AQ96BD5 680 aa11.78□□□□□ -0.52
SDCCAG3-209ENST00000468963 NR1H4Q96RI1 486 aaPredicted RBP11.78□□□□□ -0.52
SDCCAG3-209ENST00000468963 FGF20Q9NP95 211 aaPredicted RBP11.78□□□□□ -0.52
SDCCAG3-209ENST00000468963 FAM118AQ9NWS6 357 aa11.78□□□□□ -0.52
SDCCAG3-209ENST00000468963 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.78□□□□□ -0.52
SDCCAG3-209ENST00000468963 KIF25Q9UIL4 384 aa11.78□□□□□ -0.52
SDCCAG3-209ENST00000468963 RPL36Q9Y3U8 105 aaKnown RBP11.78□□□□□ -0.52
SDCCAG3-209ENST00000468963 A0A1W2PRX2 142 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 TCRBV4S1A1TA0A5B7 111 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 SH2D7A6NKC9 451 aaPredicted RBP11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 J3QR06 171 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 GABRPO00591 440 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 RAB3AP20336 220 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 NFYBP25208 207 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 C21orf33P30042 268 aaPredicted RBP11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 OR3A4PP47883 348 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 ARHGDIBP52566 201 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 LOXL3P58215 753 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 PAX5Q02548 391 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 IL13RA2Q14627 380 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 KLHL22Q53GT1 634 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 PAN3Q58A45 887 aaKnown RBP11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 FOXB2Q5VYV0 432 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 CCDC144NLQ6NUI1 221 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 C10orf99Q6UWK7 81 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 C10orf67Q8IYJ2 551 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 HAVCR2Q8TDQ0 301 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 CAPSLQ8WWF8 208 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 SGCDQ92629 289 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 MYDGFQ969H8 173 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 JAM3Q9BX67 310 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 BARHL1Q9BZE3 327 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 S100A14Q9HCY8 104 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 AURKAIP1Q9NWT8 199 aaPredicted RBP11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 CALYQ9NYX4 217 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 IDI2-AS1Q9NZ38 188 aa11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 TSSC4Q9Y5U2 329 aaPredicted RBP11.77□□□□□ -0.53
SDCCAG3-209ENST00000468963 MEIKINA0A087WXM9 373 aa11.76□□□□□ -0.53
SDCCAG3-209ENST00000468963 WBP4O75554 376 aaKnown RBP11.76□□□□□ -0.53
SDCCAG3-209ENST00000468963 IGLL1P15814 213 aa11.76□□□□□ -0.53
SDCCAG3-209ENST00000468963 MNDAP41218 407 aa11.76□□□□□ -0.53
SDCCAG3-209ENST00000468963 ZSCAN26Q16670 478 aa11.76□□□□□ -0.53
SDCCAG3-209ENST00000468963 RSBN1Q5VWQ0 802 aaPredicted RBP11.76□□□□□ -0.53
SDCCAG3-209ENST00000468963 LPCAT4Q643R3 524 aa11.76□□□□□ -0.53
SDCCAG3-209ENST00000468963 CCDC121Q6ZUS5 278 aa11.76□□□□□ -0.53
SDCCAG3-209ENST00000468963 SATL1Q86VE3 508 aa11.76□□□□□ -0.53
SDCCAG3-209ENST00000468963 OR10K1Q8NGX5 313 aa11.76□□□□□ -0.53
SDCCAG3-209ENST00000468963 PLPPR1Q8TBJ4 325 aa11.76□□□□□ -0.53
SDCCAG3-209ENST00000468963 TNFAIP8L1Q8WVP5 186 aa11.76□□□□□ -0.53
SDCCAG3-209ENST00000468963 TSEN15Q8WW01 171 aaKnown RBP11.76□□□□□ -0.53
SDCCAG3-209ENST00000468963 PSG11Q9UQ72 335 aa11.76□□□□□ -0.53
SDCCAG3-209ENST00000468963 M0QZK8 103 aa11.75□□□□□ -0.53
SDCCAG3-209ENST00000468963 HSPB6O14558 160 aa11.75□□□□□ -0.53
SDCCAG3-209ENST00000468963 PIN1P1O15428 100 aa11.75□□□□□ -0.53
SDCCAG3-209ENST00000468963 MAGEB3O15480 346 aa11.75□□□□□ -0.53
SDCCAG3-209ENST00000468963 IL1AP01583 271 aa11.75□□□□□ -0.53
SDCCAG3-209ENST00000468963 FAM106CPP0CH98 169 aa11.75□□□□□ -0.53
SDCCAG3-209ENST00000468963 CD33P20138 364 aa11.75□□□□□ -0.53
SDCCAG3-209ENST00000468963 SOX2P48431 317 aa11.75□□□□□ -0.53
SDCCAG3-209ENST00000468963 KCNJ3P48549 501 aa11.75□□□□□ -0.53
SDCCAG3-209ENST00000468963 DIAPH2-AS1Q14236 149 aa11.75□□□□□ -0.53
SDCCAG3-209ENST00000468963 RBM39Q14498 530 aaKnown RBP11.75□□□□□ -0.53
SDCCAG3-209ENST00000468963 SMN1Q16637 294 aaKnown RBP11.75□□□□□ -0.53
SDCCAG3-209ENST00000468963 PIGYQ3MUY2 71 aa11.75□□□□□ -0.53
SDCCAG3-209ENST00000468963 CCDC58Q4VC31 144 aa11.75□□□□□ -0.53
SDCCAG3-209ENST00000468963 XAF1Q6GPH4 301 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms